BAC Information

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BAC

Clone NameB6Ng01-223N05
Chromosome14 (Build37)
Map Location 8,342,169 - 8,342,933
singlet/doubletsinglet
Overlap geneLOC100042286
Upstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC666957, LOC100042263, LOC100042258, LOC100042272
Downstream geneLOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223N05.bB6Ng01-223N05.g
ACCGA038461GA038462
length765886
definitionB6Ng01-223N05.b B6Ng01-223N05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttatatattttgtatattagccgtgcattggatggggagttgg
taaacattatttccgaatatatagcttgccaatttgtcctattggctatg
ccctttgtcttacagaagcttttcagtttcttgtggcccatttataaatt
ttgatgttagaacctgagctattggagttctgtttatgatatttatcccc
attcccatgagtttgaggctctttcctgctttctcttccattagattcag
tggggatttggctgcactgatgaatctgcctttagttttagcttcaatag
ctgcttggctggactttttggtccttgagttcataagccttcttctttgg
tttggaaattctggagttgcttgagaccattctgatcatcacccctaaaa
gagagagaagccttgcatattatcaggtttattctggccaaaatgcagaa
gagtatatttctcttgtcctattttgaaaggacagctgactatctctctg
atgcttattttctggatggaaagacttcctatgcaataggtctgcagtgt
caaagacatataggttaaaatactcatagatgttttttgtttcaccaggc
aaccaaggcatactatgctttctcttctctcttctgtcttctctctcctc
tcttctttctcctctctcctccctcctcccttctcccttcttcccttctc
ccttcccttattctcattctctctctctctctctctctctctctctctct
ctctctctctctctc
gaattctttgttcagttctgagccccattttttaatggggctatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctgtctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctctggagtttaa
tgaggtcccatttgtgaattctcgatcttacagcacaagccattgctgtt
atattcaggaattttccccctgtgcgcatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttaaccttagtacaaggagataggtatggatcgattagc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtccttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactgtagtggctattcctggttgtcatcttgacaat
atttggaatgaactacaatccggaattggaaggatcaccagtgaccttta
tctggaggcttggagatccttatctggatcttggtatggagatcttgagc
catagtggctatggattccagaagattcaatctctgagtttaaggaacac
acctttaatctgggctacacctttcatctgggattaaaggtgtggtggaa
cactcctgtgaatcgggctacaccttctgctggagacaatgtaaggacat
tggaatgaagggagtctagttcttgctccttacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8342169_8342933
seq2: B6Ng01-223N05.b_46_810

seq1  GAATTCTTTATATATTTTGTATATTAGCCGTGCATTGGATGGGGAGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATATTTTGTATATTAGCCGTGCATTGGATGGGGAGTTGG  50

seq1  TAAACATTATTTCCGAATATATAGCTTGCCAATTTGTCCTATTGGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTATTTCCGAATATATAGCTTGCCAATTTGTCCTATTGGCTATG  100

seq1  CCCTTTGTCTTACAGAAGCTTTTCAGTTTCTTGTGGCCCATTTATAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGTCTTACAGAAGCTTTTCAGTTTCTTGTGGCCCATTTATAAATT  150

seq1  TTGATGTTAGAACCTGAGCTATTGGAGTTCTGTTTATGATATTTATCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTAGAACCTGAGCTATTGGAGTTCTGTTTATGATATTTATCCCC  200

seq1  ATTCCCATGAGTTTGAGGCTCTTTCCTGCTTTCTCTTCCATTAGATTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATGAGTTTGAGGCTCTTTCCTGCTTTCTCTTCCATTAGATTCAG  250

seq1  TGGGGATTTGGCTGCACTGATGAATCTGCCTTTAGTTTTAGCTTCAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATTTGGCTGCACTGATGAATCTGCCTTTAGTTTTAGCTTCAATAG  300

seq1  CTGCTTGGCTGGACTTTTTGGTCCTTGAGTTCATAAGCCTTCTTCTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGCTGGACTTTTTGGTCCTTGAGTTCATAAGCCTTCTTCTTTGG  350

seq1  TTTGGAAATTCTGGAGTTGCTTGAGACCATTCTGATCATCACCCCTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAATTCTGGAGTTGCTTGAGACCATTCTGATCATCACCCCTAAAA  400

seq1  GAGAGAGAAGCCTTGCATATTATCAGGTTTATTCTGGCCAAAATGCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAGCCTTGCATATTATCAGGTTTATTCTGGCCAAAATGCAGAA  450

seq1  GAGTATATTTCTCTTGTCCTATTTTGAAAGGACAGCTGACTATCTCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATATTTCTCTTGTCCTATTTTGAAAGGACAGCTGACTATCTCTCTG  500

seq1  ATGCTTATTTTCTGGATGGAAAGACTTCCTATGCAATAGGTCTGCAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTATTTTCTGGATGGAAAGACTTCCTATGCAATAGGTCTGCAGTGT  550

seq1  CAAAGACATATAGGTTAAAATACTCATAGATGTTTTTTGTTTCACCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACATATAGGTTAAAATACTCATAGATGTTTTTTGTTTCACCAGGC  600

seq1  AACCAAGGCATACTATGCTTTCTCTTCTCTCTTCTGTCTTCTCTCTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGGCATACTATGCTTTCTCTTCTCTCTTCTGTCTTCTCTCTCCTC  650

seq1  TCTTCTTTCTCCTCTCTCCTCCCTCCTCCCTTCTCCCTTCTTCCCTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCTCCTCTCTCCTCCCTCCTCCCTTCTCCCTTCTTCCCTTCTC  700

seq1  CCTTCCCTTATTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTTATTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  750

seq1  CTCTCTCTCTCTCTC  765
      |||||||||||||||
seq2  CTCTCTCTCTCTCTC  765