BAC Information

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BAC

Clone NameB6Ng01-224F17
Chromosome14 (Build37)
Map Location 124,760,588 - 124,902,934
singlet/doubletdoublet
Overlap geneFgf14
Upstream geneVgcnl1, Itgbl1, LOC668700
Downstream geneGA_x5J8B7W4W3R-189177-188236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224F17.bB6Ng01-224F17.g
ACCGA038838GA038839
length1,1611,145
definitionB6Ng01-224F17.b B6Ng01-224F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,901,760 - 124,902,934)(124,760,588 - 124,761,737)
sequence
gaattctttgtttagctctctaccccatttttaatagggttatttaattt
tctggggtccatcttcttgagggagaacactgctttcctttctttctctt
tgatattggtcagagatcgttgatagtttcttcgttttatgtaataagaa
caaattagtgttttttctgctccattattaaagaactattattgtgaatt
tatatgattctatagttcagacacaagaaatctcatttgtttttattttg
ttttcttatttctctgcacccttatattgttttcacagaaacatgtgttt
gttttttgggatgacatcctaggatactgccaataaagggccaatcttca
tggtctcctgcatcgggcactacttggtgactatctctgtatctttattt
gataatatctatgtgctgtctagaagcagttaggactacataatcaatga
ctgaaaaatgactttcttgtccaataagatattcagcttattacataaag
caacacaaaattcactagaggactctaatttgtgtatacttactatttct
gttatcaaatctatgacccactttttcataagagtctgtaatctgataga
tataataatacagattgaagatttttatctaaagtactgtttctccactc
acccacacacatgtgcatcaccacttatacacaattgtttgtatgaagtg
gtcaaagaatgcagaatttgggaagtacgtaaaaataatcattgtgccca
ttcttatgtatcaatgatgaaatttcaattcacacccaccttacaagtca
taagtttaagaaagcactcagaaactaaaacagaacataaaattgcagaa
ttctgacacagcatagatctgggtgttccacaaaaaaaaaaaaaaaaaaa
tagtccgttaaaagaatgtcccaaggtcagtttgggttttcaaggcacac
aggggattacaaccctccttagtggaaatatcaattaaaactcagaccta
gtagttcttggatagatttatatttgctaagtataacaatgtaggaggac
tttgtggatgagtatcctggtaagaaacatggggctaggagtcatacagc
ctgctggaatcattgtctagtcctagaatcaccaagttgagatcttgaaa
cctgacaatga

gaattcactgaaggaaagcatagtgttagcctggcctgggacatggctgc
ttattgaaattatcaactcacagtgcaaaccaaatacacatcacatgttg
ctttcttctgcaattagctatttccaatttctagagttacttggattccc
atgaccagatatgtctcattttgcacatttgttgagactatctgaaaatc
ccaccatctagctctggataccacaattgacaataaacataagcatcttt
tctttctcatgatccctagacctatagtttgtcacaagttcactttttta
tttagaacatcttttctataaaatcttttccctagatttttacatttata
atgatcctgaggactgtttcttagtgcatgtaatgtgtagctaatctcct
aatctctgaatatttatttatttttcccaagcccactctcaggattgtgt
gtatttatttgaagcaattcatatgtaagtttcatgttgtttttatgcaa
agttatttgctaatgaatttagaaagtttccacagagagcaattaataat
ttactactgtttcattctactgaaatatttatagaagtacacttgtttgc
tccgtaattggcatatttagatatgcattccaagacacagaaaagcaaaa
aaaaaaaaatagttcagaaaacagtaaagatcagagaccaagagtgagtt
aaatcctactgtctgtgcactcagggtatatcagatctcattttgaaggg
tacctgctaaggtcattctttttgttaattttattttatttctatgtatt
cactttacttatatctcactgcctcactccaggtcacctcctcccacaat
ccttctcccattcccctcatctctcctctgagtgggtaggatcccctgag
gtatctcccaaccctagcacttcaattctctgcgaggctaggcatttctc
ttccattgaggccagacaggcagcccagctagtagacatatcctaagtat
agggcaatagcttttagatagccttgctaccgttgttcaagacctacatg
agaacaacctgcacattgctaacataatgtgcaggaggccctagtcaggc
tgtgtatgttcttgattgtaagttcagaactttgagagccacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_124901760_124902934
seq2: B6Ng01-224F17.b_48_1208 (reverse)

seq1  TCATTGTCTAGTTTCAAGGATCCTCAACTTGGGTGA-TCTAGACTTAGAC  49
      ||||||||  ||||||| ||| |||||||| ||||| |||||   |||||
seq2  TCATTGTCAGGTTTCAA-GAT-CTCAACTT-GGTGATTCTAGGACTAGAC  47

seq1  AATGATTTCAAGCA-GCTGTTATGACTCTTAGCCCCATGTTTC-TACAAG  97
      ||||| ||| |||| |||| |||||||| |||||||||||||| ||| | 
seq2  AATGA-TTCCAGCAGGCTG-TATGACTCCTAGCCCCATGTTTCTTACCA-  94

seq1  GGATACTTCATTCCAACAAAGTTCCTCCTACATTGTTATACTTAGCAAAT  147
      |||||| ||||  | |||||| ||||||||||||||||||||||||||||
seq2  GGATAC-TCAT--CCACAAAG-TCCTCCTACATTGTTATACTTAGCAAAT  140

seq1  ATTAATTCTATCCAAGAACTACTAGGTTCTGAGTTTTAATTGATATTTCC  197
      | ||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  A-TAAATCTATCCAAGAACTACTAGG-TCTGAGTTTTAATTGATATTTCC  188

seq1  ACTAAGGAGGGTTGT-ATCCCCTGTGTGCCTTGAAAACCCAAACTGACCT  246
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTAAGGAGGGTTGTAATCCCCTGTGTGCCTTGAAAACCCAAACTGACCT  238

seq1  TGGGACATTCTTTTAACGGACTTTTTTTTTTTTTTTTTTTTTTTTTTTGT  296
      |||||||||||||||||||||      | |||||||||||||||||||||
seq2  TGGGACATTCTTTTAACGGAC------TATTTTTTTTTTTTTTTTTTTGT  282

seq1  GGAACACCCAGATCTATGCTGTGTCAGAATTCTGCAATTTTATGTTCTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACCCAGATCTATGCTGTGTCAGAATTCTGCAATTTTATGTTCTGT  332

seq1  TTTAGTTTCTGAGTGCTTTCTTAAACTTATGACTTGTAAGGTGGGTGTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTCTGAGTGCTTTCTTAAACTTATGACTTGTAAGGTGGGTGTGA  382

seq1  ATTGAAATTTCATCATTGATACATAAGAATGGGCACAATGATTATTTTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATTTCATCATTGATACATAAGAATGGGCACAATGATTATTTTTA  432

seq1  CGTACTTCCCAAATTCTGCATTCTTTGACCACTTCATACAAACAATTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACTTCCCAAATTCTGCATTCTTTGACCACTTCATACAAACAATTGTG  482

seq1  TATAAGTGGTGATGCACATGTGTGTGGGTGAGTGGAGAAACAGTACTTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTGGTGATGCACATGTGTGTGGGTGAGTGGAGAAACAGTACTTTA  532

seq1  GATAAAAATCTTCAATCTGTATTATTATATCTATCAGATTACAGACTCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAATCTTCAATCTGTATTATTATATCTATCAGATTACAGACTCTT  582

seq1  ATGAAAAAGTGGGTCATAGATTTGATAACAGAAATAGTAAGTATACACAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAGTGGGTCATAGATTTGATAACAGAAATAGTAAGTATACACAA  632

seq1  ATTAGAGTCCTCTAGTGAATTTTGTGTTGCTTTATGTAATAAGCTGAATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGTCCTCTAGTGAATTTTGTGTTGCTTTATGTAATAAGCTGAATA  682

seq1  TCTTATTGGACAAGAAAGTCATTTTTCAGTCATTGATTATGTAGTCCTAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGGACAAGAAAGTCATTTTTCAGTCATTGATTATGTAGTCCTAA  732

seq1  CTGCTTCTAGACAGCACATAGATATTATCAAATAAAGATACAGAGATAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTAGACAGCACATAGATATTATCAAATAAAGATACAGAGATAGT  782

seq1  CACCAAGTAGTGCCCGATGCAGGAGACCATGAAGATTGGCCCTTTATTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGTAGTGCCCGATGCAGGAGACCATGAAGATTGGCCCTTTATTGG  832

seq1  CAGTATCCTAGGATGTCATCCCAAAAAACAAACACATGTTTCTGTGAAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCCTAGGATGTCATCCCAAAAAACAAACACATGTTTCTGTGAAAA  882

seq1  CAATATAAGGGTGCAGAGAAATAAGAAAACAAAATAAAAACAAATGAGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAAGGGTGCAGAGAAATAAGAAAACAAAATAAAAACAAATGAGAT  932

seq1  TTCTTGTGTCTGAACTATAGAATCATATAAATTCACAATAATAGTTCTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTCTGAACTATAGAATCATATAAATTCACAATAATAGTTCTTT  982

seq1  AATAATGGAGCAGAAAAAACACTAATTTGTTCTTATTACATAAAACGAAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGGAGCAGAAAAAACACTAATTTGTTCTTATTACATAAAACGAAG  1032

seq1  AAACTATCAACGATCTCTGACCAATATCAAAGAGAAAGAAAGGAAAGCAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATCAACGATCTCTGACCAATATCAAAGAGAAAGAAAGGAAAGCAG  1082

seq1  TGTTCTCCCTCAAGAAGATGGACCCCAGAAAATTAAATAACCCTATTAAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCCCTCAAGAAGATGGACCCCAGAAAATTAAATAACCCTATTAAA  1132

seq1  AATGGGGTAGAGAGCTAAACAAAGAATTC  1175
      |||||||||||||||||||||||||||||
seq2  AATGGGGTAGAGAGCTAAACAAAGAATTC  1161


seq1: chr14_124760588_124761737
seq2: B6Ng01-224F17.g_69_1213

seq1  GAATTCACTGAAGGAAAGCATAGTGTTAGCCTGGCCTGGGACATGGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAAGGAAAGCATAGTGTTAGCCTGGCCTGGGACATGGCTGC  50

seq1  TTATTGAAATTATCAACTCACAGTGCAAACCAAATACACATCACATGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAATTATCAACTCACAGTGCAAACCAAATACACATCACATGTTG  100

seq1  CTTTCTTCTGCAATTAGCTATTTCCAATTTCTAGAGTTACTTGGATTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCTGCAATTAGCTATTTCCAATTTCTAGAGTTACTTGGATTCCC  150

seq1  ATGACCAGATATGTCTCATTTTGCACATTTGTTGAGACTATCTGAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGATATGTCTCATTTTGCACATTTGTTGAGACTATCTGAAAATC  200

seq1  CCACCATCTAGCTCTGGATACCACAATTGACAATAAACATAAGCATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATCTAGCTCTGGATACCACAATTGACAATAAACATAAGCATCTTT  250

seq1  TCTTTCTCATGATCCCTAGACCTATAGTTTGTCACAAGTTCACTTTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCATGATCCCTAGACCTATAGTTTGTCACAAGTTCACTTTTTTA  300

seq1  TTTAGAACATCTTTTCTATAAAATCTTTTCCCTAGATTTTTACATTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAACATCTTTTCTATAAAATCTTTTCCCTAGATTTTTACATTTATA  350

seq1  ATGATCCTGAGGACTGTTTCTTAGTGCATGTAATGTGTAGCTAATCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCTGAGGACTGTTTCTTAGTGCATGTAATGTGTAGCTAATCTCCT  400

seq1  AATCTCTGAATATTTATTTATTTTTCCCAAGCCCACTCTCAGGATTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGAATATTTATTTATTTTTCCCAAGCCCACTCTCAGGATTGTGT  450

seq1  GTATTTATTTGAAGCAATTCATATGTAAGTTTCATGTTGTTTTTATGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATTTGAAGCAATTCATATGTAAGTTTCATGTTGTTTTTATGCAA  500

seq1  AGTTATTTGCTAATGAATTTAGAAAGTTTCCACAGAGAGCAATTAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTGCTAATGAATTTAGAAAGTTTCCACAGAGAGCAATTAATAAT  550

seq1  TTACTACTGTTTCATTCTACTGAAATATTTATAGAAGTACACTTGTTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACTGTTTCATTCTACTGAAATATTTATAGAAGTACACTTGTTTGC  600

seq1  TCCGTAATTGGCATATTTAGATATGCATTCCAAGACACAGAAAAGCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTAATTGGCATATTTAGATATGCATTCCAAGACACAGAAAAGCAAAA  650

seq1  AAAAAAAAATAGTTCAGAAAACAGTAAAGATCAGAGACCAAGAGTGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATAGTTCAGAAAACAGTAAAGATCAGAGACCAAGAGTGAGTT  700

seq1  AAATCCTACTGTCTGTGCACTCAGGGTATATCAGATCTCATTTTGAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTACTGTCTGTGCACTCAGGGTATATCAGATCTCATTTTGAAGGG  750

seq1  TACCTGCTAAGGTCATTCTTTTTGTTAATTTTATTTTATTTCTATGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTAAGGTCATTCTTTTTGTTAATTTTATTTTATTTCTATGTATT  800

seq1  CACTTTACTTATATCTCACTGCCTCACTCCAGGTCACCTCCTCCCACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTACTTATATCTCACTGCCTCACTCCAGGTCACCTCCTCCCACAAT  850

seq1  CCTTCTCCCATTCCCCTCATCTCTCCTCTGAGTGGGTAGGATCCCCTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCCATTCCCCTCATCTCTCCTCTGAGTGGGTAGGATCCCCTGAG  900

seq1  GTATCTCCCAACCCTAGCACTTCAATTCTCTGCGAGGCTAGGCATTTCTT  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTATCTCCCAACCCTAGCACTTCAATTCTCTGCGAGGCTAGGCATTTC-T  949

seq1  CTTCCATTGAGGCCAGACAAGGCAGCCCAGCTAGTAGAACATATCCTAAG  1000
      |||||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  CTTCCATTGAGGCCAGAC-AGGCAGCCCAGCTAGTAG-ACATATCCTAAG  997

seq1  TATA-GGCAATAGCTTTTTAGATAGCCCTGCTACAGTTGTTCAAGACCTA  1049
      |||| ||||||||| |||||||||||| |||||| |||||||||||||||
seq2  TATAGGGCAATAGC-TTTTAGATAGCCTTGCTACCGTTGTTCAAGACCTA  1046

seq1  CATGAAGACCAACCTGCACATTTGCT-ACAT-ATGTGCAGGGAGGCCTAG  1097
      |||| ||| ||||||||||| ||||| |||| |||||||||  | |||||
seq2  CATG-AGAACAACCTGCACA-TTGCTAACATAATGTGCAGGAGGCCCTAG  1094

seq1  GTCCAGCCTGTGTATGTTCTTTGATTGAAAGTTCAG-ACTTTGAGAGCCA  1146
         ||| |||||||||||| ||||||| |||||||| |||||||||||||
seq2  --TCAGGCTGTGTATGTTC-TTGATTGTAAGTTCAGAACTTTGAGAGCCA  1141

seq1  CAAA  1150
      ||||
seq2  CAAA  1145


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