BAC Information

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BAC

Clone NameB6Ng01-224G07
Chromosome14 (Build37)
Map Location 85,021,444 - 85,022,266
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
Downstream geneLOC629794, LOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224G07.bB6Ng01-224G07.g
ACCGA038866GA038867
length1,0231,197
definitionB6Ng01-224G07.b B6Ng01-224G07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtcccatccacattgtggcaagctgttgtacaggagttcaac
agctgctggtctctccacttaactcctctgtttgatgaaatgtgaagaaa
aacattcctttttgaattttaaaagaaaatgaaaatcttttcaaagattt
taacaatgtcatatgtgctccttatcaaatccttctgaatttctctgtct
tgggtttctataaggtgatgttctactcacaggaactatattttttgttt
gttatcaagcaccatgatgatatagattctttgcaagaaatgtagaacag
tactcttcagttttgaaaagatactaaagtccctggggcctccagtctct
tgagggttaggtgcatcatcattgattgaacacagacccagcagtcctct
gctgtatatgtgttgggggcctcatatcagctggtgtatgatggctgttt
ggtggtccagagtttgagagatatcaggggtccagattaattgagacatc
tgatcctcttacagggtcaacctcctcctcatcagtttctttcatccttt
ccctaattcatccacaggggtcagcagtttctgtccattggttaggtgta
aatatctgcatcagactctttcagctgcttgttgagtcttctggagtggg
attatgctaggtccctttttgtaagcattctgtggcctcagtaaaagtgc
caggccttgggatctcctcttgagctggattccactttggaatcgtcact
ggaccttcttttcctcaggatcctctccatttccatccctgtagttcttt
cagacaggaataattatgggtgagagctttgactgtggaatggcaacccc
cctcccttatttgatgccctgtcttcctgctggaggtgggttctgtaagt
tctctctccctactgtcagcatttcatctaagtccctctctttgagttta
agtgtctctcatctctcagtctctggtgcattctggagcgtcccccaacc
ttctacctccagagatggctgtt

gaattcctacagctgatgaacaccttcaacaagggtgactggatacacaa
ttaactcaaacaaagttgcattcttccattatacaaatgataaactgctg
gagaaggaaattagggaaacaacaccctttacaataggtatgaataatat
aaaatatcttggtgtaactctaaccctgaaagtgaaatgtctatatgaaa
agaaattcaagaacctgaagagagaaactgaataatatatcagaatatgg
aaagatctcccaatatcatagataggtaggcttaacatagtgaaaatggc
caccatacaaataatagtattagatttgtgcaatccccatcaaaatttta
acacaactttttatagactttgaaagaacagttctcaacttctcaacttc
atatggaaaaacaaaaaacccaggatatcaaaaaaaaaaaaaatctgaca
ataaaagaatttggggaggaattaccatccttaacctcaagctgtactac
aaagcaatagtcataaaaactgtatggtatttatgcagaaacagatatgt
tgatcaatgtaatcaaattgaagatcaacagataaacccacacacctatg
gatacttgatttttggtttttttttttttttttttccggagctgaggacc
gaacccagggccttgggcttgctaggcaagcactttaccactgagctaaa
tccccaaccccggatacttgatttttaacgatgaaccagaagaaatacaa
cagaaaaataaaagaatctgtaaaaaatggggctggactaactagacatc
tacatatagaagaatgaaaatagattcatatttatcaccttgcataaaac
ccaagtcaagtgtgttaagggacctcaacataaaaccagataccaccata
tctcataagaaaaagaaaatgggaaataagcttgagtgcatggtactggg
agacatgttcctgaacagaaattcatagcctcaggcctctaagatcacca
ttgacaaaagggaccttcatgggagcttctgtaggaagggacacctgtca
ataggattagcagccacctacggattggaaacattctcatgacctacaca
cgatagagggctgattcggaaattatagggaaccgagttggactccgaag
cggattagccaatttgaacttgggagtcactgcgagtccctaatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85021444_85022266
seq2: B6Ng01-224G07.b_45_867

seq1  GAATTCAAGTCCCATCCACATTGTGGCAAGCTGTTGTACAGGAGTTCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTCCCATCCACATTGTGGCAAGCTGTTGTACAGGAGTTCAAC  50

seq1  AGCTGCTGGTCTCTCCACTTAACTCCTCTGTTTGATGAAATGTGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGGTCTCTCCACTTAACTCCTCTGTTTGATGAAATGTGAAGAAA  100

seq1  AACATTCCTTTTTGAATTTTAAAAGAAAATGAAAATCTTTTCAAAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCTTTTTGAATTTTAAAAGAAAATGAAAATCTTTTCAAAGATTT  150

seq1  TAACAATGTCATATGTGCTCCTTATCAAATCCTTCTGAATTTCTCTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGTCATATGTGCTCCTTATCAAATCCTTCTGAATTTCTCTGTCT  200

seq1  TGGGTTTCTATAAGGTGATGTTCTACTCACAGGAACTATATTTTTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCTATAAGGTGATGTTCTACTCACAGGAACTATATTTTTTGTTT  250

seq1  GTTATCAAGCACCATGATGATATAGATTCTTTGCAAGAAATGTAGAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAAGCACCATGATGATATAGATTCTTTGCAAGAAATGTAGAACAG  300

seq1  TACTCTTCAGTTTTGAAAAGATACTAAAGTCCCTGGGGCCTCCAGTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCAGTTTTGAAAAGATACTAAAGTCCCTGGGGCCTCCAGTCTCT  350

seq1  TGAGGGTTAGGTGCATCATCATTGATTGAACACAGACCCAGCAGTCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTTAGGTGCATCATCATTGATTGAACACAGACCCAGCAGTCCTCT  400

seq1  GCTGTATATGTGTTGGGGGCCTCATATCAGCTGGTGTATGATGGCTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATGTGTTGGGGGCCTCATATCAGCTGGTGTATGATGGCTGTTT  450

seq1  GGTGGTCCAGAGTTTGAGAGATATCAGGGGTCCAGATTAATTGAGACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTCCAGAGTTTGAGAGATATCAGGGGTCCAGATTAATTGAGACATC  500

seq1  TGATCCTCTTACAGGGTCAACCTCCTCCTCATCAGTTTCTTTCATCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTCTTACAGGGTCAACCTCCTCCTCATCAGTTTCTTTCATCCTTT  550

seq1  CCCTAATTCATCCACAGGGGTCAGCAGTTTCTGTCCATTGGTTAGGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATTCATCCACAGGGGTCAGCAGTTTCTGTCCATTGGTTAGGTGTA  600

seq1  AATATCTGCATCAGACTCTTTCAGCTGCTTGTTGAGTCTTCTGGAGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGCATCAGACTCTTTCAGCTGCTTGTTGAGTCTTCTGGAGTGGG  650

seq1  ATTATGCTAGGTCCCTTTTTGTAAGCATTCTGTGGCCTCAGTAAAAGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCTAGGTCCCTTTTTGTAAGCATTCTGTGGCCTCAGTAAAAGTGC  700

seq1  CAGGCCTTGGGATCTCCTCTTGAGCTGGATTCCACTTTGGAATCGTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTGGGATCTCCTCTTGAGCTGGATTCCACTTTGGAATCGTCACT  750

seq1  GGACCTTCTTTTCCTCAGGATCCTCTCCATTTCCATCCCTGTAGTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTCTTTTCCTCAGGATCCTCTCCATTTCCATCCCTGTAGTTCTTT  800

seq1  CAGACAGGAATAATTATGGGTGA  823
      |||||||||||||||||||||||
seq2  CAGACAGGAATAATTATGGGTGA  823


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