BAC Information

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BAC

Clone NameB6Ng01-224O14
Chromosome14 (Build37)
Map Location 14,742,236 - 14,921,420
singlet/doubletdoublet
Overlap geneGm281, Thoc7, Atxn7
Upstream geneLOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik, EG382844, LOC100042045
Downstream genePsmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224O14.bB6Ng01-224O14.g
ACCGA039241GA039242
length1,1081,175
definitionB6Ng01-224O14.b B6Ng01-224O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,742,236 - 14,743,229)(14,920,254 - 14,921,420)
sequence
gaattctaccagaatctcaaagaaaaaaaaactaacatcactacttttca
agtaacccataaaataaaaacagaaaaattacttccatactctctttgtg
aaaccagtgttatcataatagtaaagccacataaagacccaaccaaaaac
taaaattagaacatagagacaaaaaaaatttccataaaatacttgcaaac
caaattcgaggaagcatcaagagagatgcagggtgtttcaacaaatgcaa
atcaatacatgtaattcaccacaaaaatgagttcaaagacagaaatcata
taatcacttcattagaggcaaataagacctttgtcaaaatccaagattca
taataaaagttcaggaaactctaggaatacagaggacatatctcaatacg
atgaaggcaacacacaattagtcaatatctaaaggaaaaacatcaaagca
tttcctctaaaaacaggaatcctacaggaatgttcatgtttcccagtcct
gttcaataaagtcattgaagtttgagctagacctaagacaagggaaagag
attaagtggaaacaataggaaaagcactcagaattccttacttacagagg
tataagcttatgagtttaaaagtaaacagatttaccacttcagtttattt
ggtccattgtgtgatgctgatgtaaaccaggtgttaggggaagttaggaa
ttccatctcccatctgttcttcattcccactccaagttactaaggctcac
tggaaaatggatcactcaggaaagagacattaggtagatgtgtgcaagca
aactccattttgggattttattagtttagtgcacaggggcacaacttcca
tctgctggcacctctactttgttgctcgatggtgtcctctggcattgaag
tgcttagaaaattattacacctgcgcttccaaagagaccttctctgactc
tacaagatctgacacaaatccttaatgggttcagacctctctgcagcatc
aatgattccatcctcctccccgcttgaatcctcttcggctttcaagtacc
tggctttaggaaaacatgcacttctgtcctgctcaagctctaatctgaag
ttccatcc
gaattccagaagaatccctcacaagagccatcatgttaatgaaagaaatt
attaaacaaggagagtatgagtcacggaagccctctgagaacttaaatgc
agacacctaacaccgcactgaatgtcccctgaagccactctgctgctgcc
aacaagtaagccttgaatcagtacatcctgtgtcaccatttaggcactcc
aatccctcaacacaggcttctatgacaccagcataggacagaggcaaccg
gcaaccagttgataagcaggaagacccatgccactaacaaagcaacttct
cttattatcttaccgacactgttatattgcctagtaaaagtgatgtcagc
aaaaccctaaggcttcactcgacagtggatccttggataagtgcttgcaa
actctagtgcagtctgtactctaatagctgttaaactgccaagtgacttc
aacattgccctgctgtttctgtggttttcagacagctaagccagatagtg
aaagccaggtttcctgtgctcgttctcaatgagcaggggctgggggctca
gcaaccagaacagagtgcgctgaagagctattcctggaacagccttacaa
cagcccagtcactgcaaactcctctcacctcacccagttagcaaagtcct
tgtgcagtagcaggtacccgactgctttctgagataaccaaggttatgag
acattggggataaaatggacggcatattctcccccaaaaagggaagcagg
ccaaggaaacactacttgccatcaggttgcgagatatcatgacaaagcaa
gataaacttcaacccacagtatactgctcttcttccacgtgacctcaaaa
aagctcctagctccagacccacttcagttagctagtcaaagaaaccacgg
aaatgagactccttctagtctttcccccctcactgctgtgacttaagaaa
ccctgatgcctttaaacccctgccctcacctttccaccaaggaagaccat
agaagtcggattcaaaccagaccctcctcgaacttaagaaccctcataaa
ggcacttgcgcaccggctccctttcccatggtttgaaaaggggacacatg
cagactctccaggaatgctgtgaccaattcatgccatccagaccagaatt
agctcagtccaatacctcactcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14742236_14743229
seq2: B6Ng01-224O14.b_155_1155

seq1  TGTTATCATAATAGTAAAGCCACATAAAGACCCAACCAAAAACTAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCATAATAGTAAAGCCACATAAAGACCCAACCAAAAACTAAAATT  50

seq1  AGAACATAGAGACAAAAAAAATTTCCATAAAATACTTGCAAACCAAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATAGAGACAAAAAAAATTTCCATAAAATACTTGCAAACCAAATTC  100

seq1  GAGGAAGCATCAAGAGAGATGCAGGGTGTTTCAACAAATGCAAATCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCATCAAGAGAGATGCAGGGTGTTTCAACAAATGCAAATCAATA  150

seq1  CATGTAATTCACCACAAAAATGAGTTCAAAGACAGAAATCATATAATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATTCACCACAAAAATGAGTTCAAAGACAGAAATCATATAATCAC  200

seq1  TTCATTAGAGGCAAATAAGACCTTTGTCAAAATCCAAGATTCATAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAGAGGCAAATAAGACCTTTGTCAAAATCCAAGATTCATAATAAA  250

seq1  AGTTCAGGAAACTCTAGGAATACAGAGGACATATCTCAATACGATGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGGAAACTCTAGGAATACAGAGGACATATCTCAATACGATGAAGG  300

seq1  CAACACACAATTAGTCAATATCTAAAGGAAAAACATCAAAGCATTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACACAATTAGTCAATATCTAAAGGAAAAACATCAAAGCATTTCCTC  350

seq1  TAAAAACAGGAATCCTACAGGAATGTTCATGTTTCCCAGTCCTGTTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAGGAATCCTACAGGAATGTTCATGTTTCCCAGTCCTGTTCAAT  400

seq1  AAAGTCATTGAAGTTTGAGCTAGACCTAAGACAAGGGAAAGAGATTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATTGAAGTTTGAGCTAGACCTAAGACAAGGGAAAGAGATTAAGT  450

seq1  GGAAACAATAGGAAAAGCACTCAGAATTCCTTACTTACAGAGGTATAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAATAGGAAAAGCACTCAGAATTCCTTACTTACAGAGGTATAAGC  500

seq1  TTATGAGTTTAAAAGTAAACAGATTTACCACTTCAGTTTATTTGGTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGTTTAAAAGTAAACAGATTTACCACTTCAGTTTATTTGGTCCAT  550

seq1  TGTGTGATGCTGATGTAAACCAGGTGTTA-GGGAAGTTAGGAATTCCATC  599
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGTGTGATGCTGATGTAAACCAGGTGTTAGGGGAAGTTAGGAATTCCATC  600

seq1  TCCCATCTGTTCTTCATTCCCACTCCAAGTTACTAAGGCTCACTGGAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTGTTCTTCATTCCCACTCCAAGTTACTAAGGCTCACTGGAAAA  650

seq1  TGGATCACTCAGGAAAGAGACATTAGGTAGATGTGTGCAAAGCAAACTCC  699
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGATCACTCAGGAAAGAGACATTAGGTAGATGTGTGC-AAGCAAACTCC  699

seq1  ATTTT-GGATTTTATTAGTTTAGTGCACAGGGGCACAACTTCCATCTGCT  748
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGATTTTATTAGTTTAGTGCACAGGGGCACAACTTCCATCTGCT  749

seq1  GGCACCTCTACCTTGTTGCTCGATGGTGTCCTCTGGCATTGAAGTGC-TA  797
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GGCACCTCTACTTTGTTGCTCGATGGTGTCCTCTGGCATTGAAGTGCTTA  799

seq1  GAAAATTAATACACCTGCGC-TCCAAAGAGACCTTCTCCTGACTCTTACA  846
      |||||||| ||||||||||| |||||||||||||||| ||||||| ||||
seq2  GAAAATTATTACACCTGCGCTTCCAAAGAGACCTTCT-CTGACTC-TACA  847

seq1  AGATCTGACACAAATCC-TAAT-GGTTCAGACCTCTCTGCAGCCATCAAT  894
      ||||||||||||||||| |||| ||||||||||||||||||| |||||||
seq2  AGATCTGACACAAATCCTTAATGGGTTCAGACCTCTCTGCAG-CATCAAT  896

seq1  GATT-CATCCTCCT-CCCGCCTGAAT-CTCTTCGGCTTTCAAGTACCT-G  940
      |||| ||||||||| ||||| ||||| ||||||||||||||||||||| |
seq2  GATTCCATCCTCCTCCCCGCTTGAATCCTCTTCGGCTTTCAAGTACCTGG  946

seq1  CTTTAGG-ACACATGCAC-TCTGT-CTGCTCAAGCTCCTATCTGGAAAGT  987
      ||||||| | |||||||| ||||| ||||||||||||  |||||  ||||
seq2  CTTTAGGAAAACATGCACTTCTGTCCTGCTCAAGCTCTAATCTG--AAGT  994

seq1  TCCATCC  994
      |||||||
seq2  TCCATCC  1001

seq1: chr14_14920254_14921420
seq2: B6Ng01-224O14.g_75_1249 (reverse)

seq1  CCTGTGTGAGTTATTGAAACTGAGCTATATCT-GTCTGTGATGCCATGAA  49
      |||| ||||| |||||  |||||||||  ||| ||||| |||| ||||||
seq2  CCTGAGTGAGGTATTG-GACTGAGCTAATTCTGGTCTG-GATGGCATGAA  48

seq1  TTGGCCACAGCATCCCT-GTGAGTCTGCATTGTTGTCCCCTTTTTCAAAC  98
      |||| |||||||| ||| | ||||||||||   ||||||| |||||||||
seq2  TTGGTCACAGCATTCCTGGAGAGTCTGCAT--GTGTCCCC-TTTTCAAAC  95

seq1  CATGGGGAAAGGAAGCCTGTGCGCAGGTG-CTTTATGA-GGTCTTTAAGT  146
      ||| |||||||| |||| ||||||| ||| |||||||| |||  ||||||
seq2  CAT-GGGAAAGGGAGCCGGTGCGCAAGTGCCTTTATGAGGGTTCTTAAGT  144

seq1  CGGAG--AGGTCTGGGTTTGAATCCGACTTCTATTGTCTTCC-TGGTGGA  193
        |||   ||||| |||||||||||||||||||| ||||||| |||||||
seq2  TCGAGGAGGGTCT-GGTTTGAATCCGACTTCTATGGTCTTCCTTGGTGGA  193

seq1  A--GTGA-GGCAGGGGTCT-AAGGCATCAGGGTTTC-TAAGTCACAGCAG  238
      |  |||| ||||||||| | |||||||||||||||| |||||||||||||
seq2  AAGGTGAGGGCAGGGGTTTAAAGGCATCAGGGTTTCTTAAGTCACAGCAG  243

seq1  TGA-GGGGGAAAGACTAGAAGGAGTCTCATTTCCGTGGTTTCTTTGACTA  287
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGGAAAGACTAGAAGGAGTCTCATTTCCGTGGTTTCTTTGACTA  293

seq1  GCT-ACTGAAGTGGGTCTGGAGCTAGGAGCTTTTTTGAGGTCACGTGGAA  336
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTGAAGTGGGTCTGGAGCTAGGAGCTTTTTTGAGGTCACGTGGAA  343

seq1  GAAGAGCAGTATACTGT-GGTTGAAGTTTATCTTGCTTTGTCATGATATC  385
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAGAGCAGTATACTGTGGGTTGAAGTTTATCTTGCTTTGTCATGATATC  393

seq1  TCGCAACCTGATGGCAAGTAGTGTTTCCTTGGCCTGCTTCCCTTTTTGGG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAACCTGATGGCAAGTAGTGTTTCCTTGGCCTGCTTCCCTTTTTGGG  443

seq1  GGAGAATATGCCGTCCATTTTATCCCCAATGTCTCATAACCTTGGTTATC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATATGCCGTCCATTTTATCCCCAATGTCTCATAACCTTGGTTATC  493

seq1  TCAGAAAGCAGTCGGGTACCTGCTACTGCACAAGGACTTTGCTAACTGGG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGCAGTCGGGTACCTGCTACTGCACAAGGACTTTGCTAACTGGG  543

seq1  TGAGGTGAGAGGAGTTTGCAGTGACTGGGCTGTTGTAAGGCTGTTCCAGG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGAGAGGAGTTTGCAGTGACTGGGCTGTTGTAAGGCTGTTCCAGG  593

seq1  AATAGCTCTTCAGCGCACTCTGTTCTGGTTGCTGAGCCCCCAGCCCCTGC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCTTCAGCGCACTCTGTTCTGGTTGCTGAGCCCCCAGCCCCTGC  643

seq1  TCATTGAGAACGAGCACAGGAAACCTGGCTTTCACTATCTGGCTTAGCTG  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAGAACGAGCACAGGAAACCTGGCTTTCACTATCTGGCTTAGCTG  693

seq1  TCTGAAAACCACAGAAACAGCAGGGCAATGTTGAAGTCACTTGGCAGTTT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACCACAGAAACAGCAGGGCAATGTTGAAGTCACTTGGCAGTTT  743

seq1  AACAGCTATTAGAGTACAGACTGCACTAGAGTTTGCAAGCACTTATCCAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTATTAGAGTACAGACTGCACTAGAGTTTGCAAGCACTTATCCAA  793

seq1  GGATCCACTGTCGAGTGAAGCCTTAGGGTTTTGCTGACATCACTTTTACT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCACTGTCGAGTGAAGCCTTAGGGTTTTGCTGACATCACTTTTACT  843

seq1  AGGCAATATAACAGTGTCGGTAAGATAATAAGAGAAGTTGCTTTGTTAGT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATATAACAGTGTCGGTAAGATAATAAGAGAAGTTGCTTTGTTAGT  893

seq1  GGCATGGGTCTTCCTGCTTATCAACTGGTTGCCGGTTGCCTCTGTCCTAT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGTCTTCCTGCTTATCAACTGGTTGCCGGTTGCCTCTGTCCTAT  943

seq1  GCTGGTGTCATAGAAGCCTGTGTTGAGGGATTGGAGTGCCTAAATGGTGA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGTCATAGAAGCCTGTGTTGAGGGATTGGAGTGCCTAAATGGTGA  993

seq1  CACAGGATGTACTGATTCAAGGCTTACTTGTTGGCAGCAGCAGAGTGGCT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGATGTACTGATTCAAGGCTTACTTGTTGGCAGCAGCAGAGTGGCT  1043

seq1  TCAGGGGACATTCAGTGCGGTGTTAGGTGTCTGCATTTAAGTTCTCAGAG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGACATTCAGTGCGGTGTTAGGTGTCTGCATTTAAGTTCTCAGAG  1093

seq1  GGCTTCCGTGACTCATACTCTCCTTGTTTAATAATTTCTTTCATTAACAT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCGTGACTCATACTCTCCTTGTTTAATAATTTCTTTCATTAACAT  1143

seq1  GATGGCTCTTGTGAGGGATTCTTCTGGAATTC  1167
      ||||||||||||||||||||||||||||||||
seq2  GATGGCTCTTGTGAGGGATTCTTCTGGAATTC  1175