BAC Information

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BAC

Clone NameB6Ng01-225M14
Chromosome14 (Build37)
Map Location 77,759,852 - 77,913,580
singlet/doubletdoublet
Overlap geneD230005D02Rik, EG629678
Upstream geneTsc22d1, 2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225M14.bB6Ng01-225M14.g
ACCGA039891GA039892
length1,1771,069
definitionB6Ng01-225M14.b B6Ng01-225M14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,912,042 - 77,913,580)(77,759,852 - 77,760,904)
sequence
gaattcataaaggaaacgtttcttaaaggaactaacattaaaaaggaaaa
aaaaaaacaggccagataaatattttaggaagtatgtagtcagactcttt
aaaatagaatctaaaaatgaagctcacatacaccaactaacagtgaccta
tgaccacatttggtaaaatacattcagaatgggaataacctgtttataaa
aggaaaacataagtaaagatgaaagggggggggggaccccaaggcaggtt
tgccagctttctgcctctgtgatgaaagacccgagggaaatcagctgaca
gggagaaaaggttaatcttcgctcctggtttcggagatctctgccttggc
aaagctgaaaatcacagtgtgagtgtgagtcagaacaaagctagcctgtg
aagagagaagaatgggaggggcttgtggactaatagcctgtctaagggca
tatccccaagtcctgacttcttcccactaggctgcatctcctaatggctc
caccacctcccagtaaggccatctctggagaccaagccttcagtgcatgg
accttcacaggaatttccttacagaattcatatgccgagaaaatataaag
taaaggactagcatgccgtatttgcaaatgaaattagcaaattaaatgta
gccgagttttatggaaattaattgcctagcgtatagtaagaaacattgaa
atattgtcttctttgacctactagttctgcatataagaagcaaccaagca
aaataattttaatagatgaacagtcctgaatgtgctttaaaatgctcatg
ataatatatttatatatattttaaaacaaaaaactaaagaaaaaggggct
tcataggcctgaactgatccatggttctgtagacctggctggggcccttt
caggggagtggactgattcgtgattctgtagacctggctgggcccctttc
agggagtggactgattcgtgatctgtagacctggctggggcccctttcag
gggagtggactgattcgtgatcctgtagaccttgcctgggccctttcaag
ggagtggactgaatcgtgatctgtagaacctgcttgggcccattcaggga
atggactgaattcatgattctgtagacctggcttggggcccttcaaggat
tgactgattctgatctgtaacctggct
gaattcctgggagtccagatatctctgagtgtgggcatggagggtggggg
ctagagcacctgatctgtttctgcgtgcagttctggattggaagcatgat
gtgtcttcagcagggcagataggtcctgagtaagctgggccccgtgggag
tccctgttaggcaaggtattggggcagggagtgtctcacctgtgagcctg
gttgtgatggatctcctggaagtcaagctgcctctgggagtatgggaggg
tatctggagtgcccgctttgccctgggctgagttgcaggctcgaagtaag
atgtgtctttgggagggcagtttggatcttgagttttcttaagtagttaa
caaatgaatgtacatgaaagaaaggaaaccaccacagcatttgaagtgcc
atgcatgaccaggttcatttggggatcgtgtgatggcggagagccatgat
gtaaagctgagataggcagctgcactagtgtgggaagattgttcctattc
tgctaaaaaggtttctgtccatcctaagtagaagtttgaatgaaagaacg
tctctattcctgcatgtagtaatttaaggggaagcgcctctttcttagaa
ccttactggggcatcttctgtgtagaaccatgataaaatcaagagtttca
agatgaaaatcactgaggccagcaagacagctcagcaggtaaagtgtgtg
ctattaaagctgataatctgagctcaatacccatgatccacaggttaaaa
aaaagagagagagagataatttgtgcaagttgccctatgacctccacatt
caggggtgtggaacaatatagatacatactcactctctgtctcgatctct
gtctctgtctctctttctctcttttacacacacacacacacacacacaca
cacacacacacacaaatatttaactagtgaattgagtagtgaagacaatt
ttgcatgaagtattggaaggtcttgttctgtcttgttttgccttacccac
tttaacaagacactcctcgtcagtccaatttgttttaatattgccaatgg
gtgcttctggttttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77912042_77913580
seq2: B6Ng01-225M14.b_46_1222 (reverse)

seq1  AGCCAGGTCTACAGAATTACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  50
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  250
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  300
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  350
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCCC  400
      |||||||| ||||| |||| ||||||||| |    |||  ||||| ||| 
seq2  AGCCAGGT-TACAG-ATCA-GAATCAGTCAA---TCCTTGAAGGGCCCCA  44

seq1  AGCCAGGTCTACAGAATCACGAA-TCAGTCCACTCCCCTGAAAGGGGCCC  449
      ||||||||||||||||||| ||| |||||||| | ||||| || ||||||
seq2  AGCCAGGTCTACAGAATCATGAATTCAGTCCA-TTCCCTG-AATGGGCCC  92

seq1  CAGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCC  499
       |||  | ||||||| ||||||| ||||||||||||| ||||| ||||||
seq2  AAGCAGGTTCTACAG-ATCACGATTCAGTCCACTCCCTTGAAA-GGGCCC  140

seq1  CAGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCC  549
        || |||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGTCTACAGGATCACGAATCAGTCCACTCCCCTGAAAGGGGCCC  190

seq1  CAGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCC  599
      ||||||||||||||| |||||||||||||||||| |||||||||||| ||
seq2  CAGCCAGGTCTACAG-ATCACGAATCAGTCCACT-CCCTGAAAGGGG-CC  237

seq1  CAGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAAGGGGCCC  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAGCCAGGTCTACAGAATCACGAATCAGTCCACTCCCCTGAAA-GGGCCC  286

seq1  CAGCCAGGTCTACAGAACCATGGATCAGTTCAGGCCTATGAAGCCCCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGTCTACAGAACCATGGATCAGTTCAGGCCTATGAAGCCCCTTT  336

seq1  TTCTTTAG-TTTTTGTTTTAAAATATATATAAATATATTATCATGAGCAT  748
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGTTTTTTGTTTTAAAATATATATAAATATATTATCATGAGCAT  386

seq1  TTTAAAGCACATTCAGGACTGTTCATCTATTAAAATTATTTTGCTTGGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCACATTCAGGACTGTTCATCTATTAAAATTATTTTGCTTGGTT  436

seq1  GCTTCTTATATGCAGAACTAGTAGGTCAAAGAAGACAATATTTCAATGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTATATGCAGAACTAGTAGGTCAAAGAAGACAATATTTCAATGTT  486

seq1  TCTTACTATACGCTAGGCAATTAATTTCCATAAAACTCGGCTACATTTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTATACGCTAGGCAATTAATTTCCATAAAACTCGGCTACATTTAA  536

seq1  TTTGCTAATTTCATTTGCAAATACGGCATGCTAGTCCTTTACTTTATATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAATTTCATTTGCAAATACGGCATGCTAGTCCTTTACTTTATATT  586

seq1  TTCTCGGCATATGAATTCTGTAAGGAAATTCCTGTGAAGGTCCATGCACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGGCATATGAATTCTGTAAGGAAATTCCTGTGAAGGTCCATGCACT  636

seq1  GAAGGCTTGGTCTCCAGAGATGGCCTTACTGGGAGGTGGTGGAGCCATTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGGTCTCCAGAGATGGCCTTACTGGGAGGTGGTGGAGCCATTA  686

seq1  GGAGATGCAGCCTAGTGGGAAGAAGTCAGGACTTGGGGATATGCCCTTAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGCAGCCTAGTGGGAAGAAGTCAGGACTTGGGGATATGCCCTTAG  736

seq1  ACAGGCTATTAGTCCACAAGCCCCTCCCATTCTTCTCTCTTCACAGGCTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTATTAGTCCACAAGCCCCTCCCATTCTTCTCTCTTCACAGGCTA  786

seq1  GCTTTGTTCTGACTCACACTCACACTGTGATTTTCAGCTTTGCCAAGGCA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTCTGACTCACACTCACACTGTGATTTTCAGCTTTGCCAAGGCA  836

seq1  GAGATCTCCGAAACCAGGAGCGAAGATTAACCTTTTCTCCCTGTCAGCTG  1248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTCCGAAACCAGGAGCGAAGATTAACCTTTTCTCCCTGTCAGCTG  886

seq1  ATTTCCCTCGGGTCTTTCATCACAGAGGCAGAAAGCTGGCAAACCTGCCT  1298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTCGGGTCTTTCATCACAGAGGCAGAAAGCTGGCAAACCTGCCT  936

seq1  TGGGGTCCCCCCCCCCCTTTCATCTTTACTTATGTTTTCCTTTTATAAAC  1348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCCCCCCCCCCCTTTCATCTTTACTTATGTTTTCCTTTTATAAAC  986

seq1  AGGTTATTCCCATTCTGAATGTATTTTACCAAATGTGGTCATAGGTCACT  1398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATTCCCATTCTGAATGTATTTTACCAAATGTGGTCATAGGTCACT  1036

seq1  GTTAGTTGGTGTATGTGAGCTTCATTTTTAGATTCTATTTTAAAGAGTCT  1448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTGGTGTATGTGAGCTTCATTTTTAGATTCTATTTTAAAGAGTCT  1086

seq1  GACTACATACTTCCTAAAATATTTATCTGGCCTGTTTTTTTTTTTCCTTT  1498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACATACTTCCTAAAATATTTATCTGGCCTGTTTTTTTTTTTCCTTT  1136

seq1  TTAATGTTAGTTCCTTTAAGAAACGTTTCCTTTATGAATTC  1539
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTAGTTCCTTTAAGAAACGTTTCCTTTATGAATTC  1177

seq1: chr14_77759852_77760904
seq2: B6Ng01-225M14.g_65_1133

seq1  GAATTCCTGGGAGTCCAGATATCTCTGAGTGTGGGCATGGAGGGTGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGAGTCCAGATATCTCTGAGTGTGGGCATGGAGGGTGGGGG  50

seq1  CTAGAGCACCTGATCTGTTTCTGCGTGCAGTTCTGGATTGGAAGCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCACCTGATCTGTTTCTGCGTGCAGTTCTGGATTGGAAGCATGAT  100

seq1  GTGTCTTCAGCAGGGCAGATAGGTCCTGAGTAAGCTGGGCCCCGTGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTCAGCAGGGCAGATAGGTCCTGAGTAAGCTGGGCCCCGTGGGAG  150

seq1  TCCCTGTTAGGCAAGGTATTGGGGCAGGGAGTGTCTCACCTGTGAGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTAGGCAAGGTATTGGGGCAGGGAGTGTCTCACCTGTGAGCCTG  200

seq1  GTTGTGATGGATCTCCTGGAAGTCAAGCTGCCTCTGGGAGTATGGGAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGATGGATCTCCTGGAAGTCAAGCTGCCTCTGGGAGTATGGGAGGG  250

seq1  TATCTGGAGTGCCCGCTTTGCCCTGGGCTGAGTTGCAGGCTCGAAGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGAGTGCCCGCTTTGCCCTGGGCTGAGTTGCAGGCTCGAAGTAAG  300

seq1  ATGTGTCTTTGGGAGGGCAGTTTGGATCTTGAGTTTTCTTAAGTAGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTTTGGGAGGGCAGTTTGGATCTTGAGTTTTCTTAAGTAGTTAA  350

seq1  CAAATGAATGTACATGAAAGAAAGGAAACCACCACAGCATTTGAAGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAATGTACATGAAAGAAAGGAAACCACCACAGCATTTGAAGTGCC  400

seq1  ATGCATGACCAGGTTCATTTGGGGATCGTGTGATGGCGGAGAGCCATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGACCAGGTTCATTTGGGGATCGTGTGATGGCGGAGAGCCATGAT  450

seq1  GTAAAGCTGAGATAGGCAGCTGCACTAGTGTGGGAAGATTGTTCCTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCTGAGATAGGCAGCTGCACTAGTGTGGGAAGATTGTTCCTATTC  500

seq1  TGCTAAAAAGGTTTCTGTCCATCCTAAGTAGAAGTTTGAATGAAAGAACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAAAGGTTTCTGTCCATCCTAAGTAGAAGTTTGAATGAAAGAACG  550

seq1  TCTCTATTCCTGCATGTAGTAATTTAAGGGGAAGCGCCTCTTTCTTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTCCTGCATGTAGTAATTTAAGGGGAAGCGCCTCTTTCTTAGAA  600

seq1  CCTTACTGGGGCATCTTCTGTGTAGAACCATGATAAAATCAAGAGTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTGGGGCATCTTCTGTGTAGAACCATGATAAAATCAAGAGTTTCA  650

seq1  AGATGAAAATCACTGAGGCCAGCAAGACAGCTCAGCAGGTAAAGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAATCACTGAGGCCAGCAAGACAGCTCAGCAGGTAAAGTGTGTG  700

seq1  CTATTAAAGCTGATAATCTGAGCTCAATACCCATGATCCACAGGTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAGCTGATAATCTGAGCTCAATACCCATGATCCACAGGTTAAAA  750

seq1  AAAAGAGAGAGAGAGATAATTTGTGCAAGTTGCCCTATGACCTCCACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGAGAGAGATAATTTGTGCAAGTTGCCCTATGACCTCCACATT  800

seq1  CAGGGGTGTGGAACAATATAGATACATACTCACTCTCTGTCTCGATCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGTGGAACAATATAGATACATACTCACTCTCTGTCTCGATCTCT  850

seq1  GTCTCTGTCTCTCTTTCTCTCTTTTACACACACACACACACACACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTCTCTCTTTCTCTCTTTTACACACACACACACACACACACACA  900

seq1  CACACACACACACAAATA-TTAACTAGTGAATTGAGTAGTGAAGACAA-T  948
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  CACACACACACACAAATATTTAACTAGTGAATTGAGTAGTGAAGACAATT  950

seq1  TTGCATG-AGTATT-GAAGGTCT--GTCTGTC-TGTCT--GCTTACCCAC  991
      ||||||| |||||| ||||||||   |||||| ||| |   |||||||||
seq2  TTGCATGAAGTATTGGAAGGTCTTGTTCTGTCTTGTTTTGCCTTACCCAC  1000

seq1  -TTAAC-AGACACT-CTCGTCAGTCC-ATTTGTTT--ATATTG-CAATGG  1034
       ||||| ||||||| ||||||||||| ||||||||  |||||| ||||||
seq2  TTTAACAAGACACTCCTCGTCAGTCCAATTTGTTTTAATATTGCCAATGG  1050

seq1  GTGCTTCTGGTTTTTTGTT  1053
      |||||||||||||||||||
seq2  GTGCTTCTGGTTTTTTGTT  1069