BAC Information

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BAC

Clone NameB6Ng01-227O02
Chromosome14 (Build37)
Map Location 86,075,756 - 86,191,288
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227O02.bB6Ng01-227O02.g
ACCGA041434GA041435
length1,156911
definitionB6Ng01-227O02.b B6Ng01-227O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,075,756 - 86,076,854)(86,190,381 - 86,191,288)
sequence
gaattcagccccccatcccctcaaccctttgtttctgagagcgagtttct
ccacttactcaaccactcccatctcatcctgctagtatctcctttccctg
gggcatcaagtttcttctgcattaagtgcatccttttccactgaggtcag
acagggcagttctctgctgcatctatagcagggccactgacaatcccctg
tatgctctttagtggatgccttagactctgggagctgctagcattagtta
atactgttgttcttcctatggggttgcaatcagctccttcaagctttcct
ctaacttttccaaggggatccccgacatcagtccaatggttggctgtaaa
gatcttcatctgtctcagtcagctgctggtagagcgtctcaggaaggcca
tgctaggctcctgtctgcaagcacagcatggcatgtaagtgtcaaggttt
ggttcctgcacatgagatggaccccaagttaggccggtcactggataacc
tttcctttagtctctgctgcattttttgtcagaatcgttcttgtctaaag
ataatgtatggacaaaattgggctttagttatattttaataaataagcta
agctatgagattccaattttatttttgtctttaagacagggtctcatcat
gtaatgaaaactggtcccatttcacgccctaccagcttgggctttgcaaa
tgctagaactcaaagcatgtaccactatggactggtcacaagactgtgtt
ttgaatctcataattacaattttgtctttaagccatttttctcagaacca
ttatagatcaaatatcacatggattctccctttgcctttaagatgatact
tttccctattgatagttggaatataagtaaaagatgtttaaaactcagct
ctctctatctctctctctctctttcacacacacacacacacacacacaca
cacacacacacacacacacacacacacactactaccactacacaacacac
acaaataaaacaaacaaacaaaaacacacatcacacacacacccaattct
catgttagttaagaagtataaggagtctttaggctatacaatattaggta
ctgtaaaatactacagccttagttcattaaggttatttctgaagacatca
gaaaaa

gaattcccttccattgctgatggagatcttcaaatgtttccagaacatgg
ttactggttacatgttgcctgttctttgttcccacttatacacaaggtcc
tttgatttcatatgcataagcatcaaggagacagcacacatgcctagaac
tatgataaatgcagaagacacaaagctgatagcaagcacctctttctttt
tcaagacacaaaatcttgtggatgaaaaagacacaggtcagttcatggga
tgctgtgtgttgaagcaaagacctacatttgttttcagtaactgagtcat
cagagatacctaagcaacacaatgaaaatgtcgaatttctaaaatctcta
tttggtgaaagatggcagaatctgtttagtgaaatcaaataaactattgc
ccacagctcaagttagatacaaggaatgctatcacatgacttgaaaaata
actgtgggtcagaaacagaagacctatctgaataagagcttttattaatt
atattgaggttttttttttcagaaatatcttatttttgatgagtactcta
gtctcttaaaattgtagtgtaactatgttagaaataactctagatttatt
tttttccaatggttgttttgatgcaagtgaacctttggggttagtgcctg
gggactctttgaactattttaagtgagtcgatcctatgatgacgaggagt
tgcttttcttgaaaaaagttgtttctgctgctgtgagtggctctacatcc
gtgcacagataggcaacgtgaaaaaggctcagtggactttgaaaaaaaga
tggcctagtcggccgtcagtgggtcagtggaaagagaggccatgcaaact
ttatatgcctcagtacttgggaatgacagagccaagatgtgggtggggtg
gggggaagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86075756_86076854
seq2: B6Ng01-227O02.b_114_1198

seq1  TCTCATCCTGCTAGTATCTCCTTTCCCTGGGGCATCAAGTTTCTTCTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCCTGCTAGTATCTCCTTTCCCTGGGGCATCAAGTTTCTTCTGCA  50

seq1  TTAAGTGCATCCTTTTCCACTGAGGTCAGACAGGGCAGTTCTCTGCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGCATCCTTTTCCACTGAGGTCAGACAGGGCAGTTCTCTGCTGCA  100

seq1  TCTATAGCAGGGCCACTGACAATCCCCTGTATGCTCTTTAGTGGATGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGCAGGGCCACTGACAATCCCCTGTATGCTCTTTAGTGGATGCCT  150

seq1  TAGACTCTGGGAGCTGCTAGCATTAGTTAATACTGTTGTTCTTCCTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTGGGAGCTGCTAGCATTAGTTAATACTGTTGTTCTTCCTATGG  200

seq1  GGTTGCAATCAGCTCCTTCAAGCTTTCCTCTAACTTTTCCAAGGGGATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAATCAGCTCCTTCAAGCTTTCCTCTAACTTTTCCAAGGGGATCC  250

seq1  CCGACATCAGTCCAATGGTTGGCTGTAAAGATCTTCATCTGTCTCAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACATCAGTCCAATGGTTGGCTGTAAAGATCTTCATCTGTCTCAGTCA  300

seq1  GCTGCTGGTAGAGCGTCTCAGGAAGGCCATGCTAGGCTCCTGTCTGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGGTAGAGCGTCTCAGGAAGGCCATGCTAGGCTCCTGTCTGCAAG  350

seq1  CACAGCATGGCATGTAAGTGTCAAGGTTTGGTTCCTGCACATGAGATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATGGCATGTAAGTGTCAAGGTTTGGTTCCTGCACATGAGATGGA  400

seq1  CCCCAAGTTAGGCCGGTCACTGGATAACCTTTCCTTTAGTCTCTGCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGTTAGGCCGGTCACTGGATAACCTTTCCTTTAGTCTCTGCTGCA  450

seq1  TTTTTTGTCAGAATCGTTCTTGTCTAAAGATAATGTATGGACAAAATTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTCAGAATCGTTCTTGTCTAAAGATAATGTATGGACAAAATTGG  500

seq1  GCTTTAGTTATATTTTAATAAATAAGCTAAGCTATGAGATTCCAATTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTTATATTTTAATAAATAAGCTAAGCTATGAGATTCCAATTTTA  550

seq1  TTTTTGTCTTTAAGACAGGGTCTCATCATGTAATGAAAACTGGTCCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTTTAAGACAGGGTCTCATCATGTAATGAAAACTGGTCCCATT  600

seq1  TCACGCCCTACCAGCTTGGGCTTTGCAAATGCTAGAACTCAAAGCATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCCCTACCAGCTTGGGCTTTGCAAATGCTAGAACTCAAAGCATGTA  650

seq1  CCACTATGGACTGGTCACAAGACTGTGTTTTGAATCTCATAATTACAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGGACTGGTCACAAGACTGTGTTTTGAATCTCATAATTACAATT  700

seq1  TTGTCTTTAAGCCATTTTTCTCAGAACCATTATAGATCAAATATCACATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTAAGCCATTTTTCTCAGAACCATTATAGATCAAATATCACATG  750

seq1  GATTCTCCC-TTGCCTTTAAGATGATACTTTTCCCTATTGATAGTTGGAA  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCCCTTTGCCTTTAAGATGATACTTTTCCCTATTGATAGTTGGAA  800

seq1  TATAAGTAAAAGATGTTTAAAACTCAGCTCTCTCTATCTCTCTCTCTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTAAAAGATGTTTAAAACTCAGCTCTCTCTATCTCTCTCTCTCTC  850

seq1  TTTCACACACACACACACACACACACACACACACACACACACACACACAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACACACACACACACACACACACACACACACACACACACACACAC  900

seq1  ACACACACCACTACCACTACCACAACAACAACAACAAATAAAAACAAACA  949
      |||||||| |||||||||||    ||||||   |||||| ||||||||||
seq2  ACACACACTACTACCACTAC----ACAACACACACAAAT-AAAACAAACA  945

seq1  AACAAAAACACCACAATCACACACACACCCAATTCCTCAATTGTAAG-TA  998
      |||||||||| ||| ||||||||||||||||||| ||||  ||| || ||
seq2  AACAAAAACA-CAC-ATCACACACACACCCAATT-CTCA--TGTTAGTTA  990

seq1  AGAAGTAT-AGGAGTCTTTTAGGGTATACCAATATTTAGTACTGTAAAAT  1047
      |||||||| ||||||| |||||| |||| |||||||  ||||||||||||
seq2  AGAAGTATAAGGAGTC-TTTAGGCTATA-CAATATTAGGTACTGTAAAAT  1038

seq1  ACTACCAAGCTAAGTTCATTAAAAGTTATTTTCTGAAGGACATCAAGAAA  1097
      |||| ||  || |||||||| || |||| |||||||| |||||| |||||
seq2  ACTA-CAGCCTTAGTTCATT-AAGGTTA-TTTCTGAA-GACATC-AGAAA  1083

seq1  AA  1099
      ||
seq2  AA  1085


seq1: chr14_86190381_86191288
seq2: B6Ng01-227O02.g_65_975 (reverse)

seq1  ACGCT--CCCCCA-CCCACCCACATCTTGGCTCTGTCATTCCCAAGTACT  47
      |||||  |||||| ||||||||||||||||||||||||||||||||||||
seq2  ACGCTTCCCCCCACCCCACCCACATCTTGGCTCTGTCATTCCCAAGTACT  50

seq1  GAGGCATATAAAGTTTGCATGGCCTCTCTTTCCACTGACCCACTGACGGC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATATAAAGTTTGCATGGCCTCTCTTTCCACTGACCCACTGACGGC  100

seq1  CGACTAGGCCATCTTTTTTTCAAAGTCCACTGAGCCTTTTTCACGTTGCC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTAGGCCATCTTTTTTTCAAAGTCCACTGAGCCTTTTTCACGTTGCC  150

seq1  TATCTGTGCACGGATGTAGAGCCACTCACAGCAGCAGAAACAACTTTTTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGCACGGATGTAGAGCCACTCACAGCAGCAGAAACAACTTTTTT  200

seq1  CAAGAAAAGCAACTCCTCGTCATCATAGGATCGACTCACTTAAAATAGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAGCAACTCCTCGTCATCATAGGATCGACTCACTTAAAATAGTT  250

seq1  CAAAGAGTCCCCAGGCACTAACCCCAAAGGTTCACTTGCATCAAAACAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGTCCCCAGGCACTAACCCCAAAGGTTCACTTGCATCAAAACAAC  300

seq1  CATTGGAAAAAAATAAATCTAGAGTTATTTCTAACATAGTTACACTACAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAAAAAAATAAATCTAGAGTTATTTCTAACATAGTTACACTACAA  350

seq1  TTTTAAGAGACTAGAGTACTCATCAAAAATAAGATATTTCTGAAAAAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAGACTAGAGTACTCATCAAAAATAAGATATTTCTGAAAAAAAA  400

seq1  AACCTCAATATAATTAATAAAAGCTCTTATTCAGATAGGTCTTCTGTTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAATATAATTAATAAAAGCTCTTATTCAGATAGGTCTTCTGTTTC  450

seq1  TGACCCACAGTTATTTTTCAAGTCATGTGATAGCATTCCTTGTATCTAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCACAGTTATTTTTCAAGTCATGTGATAGCATTCCTTGTATCTAAC  500

seq1  TTGAGCTGTGGGCAATAGTTTATTTGATTTCACTAAACAGATTCTGCCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGTGGGCAATAGTTTATTTGATTTCACTAAACAGATTCTGCCAT  550

seq1  CTTTCACCAAATAGAGATTTTAGAAATTCGACATTTTCATTGTGTTGCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACCAAATAGAGATTTTAGAAATTCGACATTTTCATTGTGTTGCTT  600

seq1  AGGTATCTCTGATGACTCAGTTACTGAAAACAAATGTAGGTCTTTGCTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATCTCTGATGACTCAGTTACTGAAAACAAATGTAGGTCTTTGCTTC  650

seq1  AACACACAGCATCCCATGAACTGACCTGTGTCTTTTTCATCCACAAGATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAGCATCCCATGAACTGACCTGTGTCTTTTTCATCCACAAGATT  700

seq1  TTGTGTCTTGAAAAAGAAAGAGGTGCTTGCTATCAGCTTTGTGTCTTCTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTGAAAAAGAAAGAGGTGCTTGCTATCAGCTTTGTGTCTTCTG  750

seq1  CATTTATCATAGTTCTAGGCATGTGTGCTGTCTCCTTGATGCTTATGCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATCATAGTTCTAGGCATGTGTGCTGTCTCCTTGATGCTTATGCAT  800

seq1  ATGAAATCAAAGGACCTTGTGTATAAGTGGGAACAAAGAACAGGCAACAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCAAAGGACCTTGTGTATAAGTGGGAACAAAGAACAGGCAACAT  850

seq1  GTAACCAGTAACCATGTTCTGGAAACATTTGAAGATCTCCATCAGCAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAGTAACCATGTTCTGGAAACATTTGAAGATCTCCATCAGCAATG  900

seq1  GAAGGGAATTC  908
      |||||||||||
seq2  GAAGGGAATTC  911


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