BAC Information

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BAC

Clone NameB6Ng01-229I14
Chromosome14 (Build37)
Map Location 112,353,817 - 112,354,981
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622052, LOC100043491, LOC100043494, Slitrk5, LOC100043501
Downstream geneEG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229I14.bB6Ng01-229I14.g
ACCGA042650GA042651
length1,154865
definitionB6Ng01-229I14.b B6Ng01-229I14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttacccaaaactcaaccaatatataaaatgtttttaattgcaa
atttaatatcatttcctgccttaccttcctttcttggctactagttatat
aatttggattatccagaaactttgctaagaagtaaagccaaatgttgcaa
ctctctctagttaatatgtaactacagaatttatgttattcttgtatttt
tatgaataatgtacaaagctatacatttaaaagcctacatttagtactta
catttatttgaagtattgacaacaatatttgtctttgcatgtgctttaat
ttaggaaattcagttatcagaaatatttactaaaagtcactgacatcctt
atttttcaattaattgctacaaaaatctacatttgaagaaaacataagaa
attccacccttagccaactagatcagaaatgatctcatcagagtggaatt
tactctgcaattcaaatttcttgtttcattttgaaaacaataatggagat
tagtgaagttaaactcttttttattactattattacctttttttcccttt
tttttacagtccacccattggtcaccttctgattccccatcccacagttc
ctcaccccattcctcctctttgcctataagtggatgttcccaccaccatg
accaggcctccctaatccctggagcttcaagtcttaaatggaacctactg
agaaatgctgccaagtccatataactttgaatcaagcagaatggactaat
gtcaggctgtaaaacaatgaatgctgttcattgagactgaaatattaatg
ggagatttcaacactaacaacatttcaaagtacaagaaagaacttatcat
taagctgtagctaaaaatacagtttataggtgaaaattttgcttctgtta
tgctgatggaataaataaaaggtgcaaagaatttcatttttgcaagtcaa
atttactaggaagatatttaaaagaatagccccaagccaaaaagaaactg
ttgtaataatgcttatgtagaataaaccgcatatcaaaatatctgttcaa
taaattttagttctttgtacaatgataaatatacatcagccactgagaca
aatgctttggcttctgtttacagtgcacattggatgaagtaaacactata
aaat

gaattctctggtggaatttttagggtcactcatatgtactattatatcat
ctgccaatactgatattttgacttcttcctttccaatttgtatcccattg
atctccttttgttgtgtaattgctctagcaaaaacttcaagtactatatt
ggatagatagatagatagatagatagatagatagatagatagatagatga
tagattagatagataatccctgagtttagtgtgattgctttaaatttctc
tccatttagtttgatgttcactactggtttgctatatattgcttttacta
tgtttaggtacgggtcttgaatttctaatctatccaatacttttatcatg
aaggggtgttgaatttcataaaatgctctctcagtatctaataaaattat
catgtgtttttttctttgagtttgtgtatatagtggattacattgatgga
tttccatatattgaaccatccctaaatccctgggatgaagtctacttgat
catgatgtatgattgttttgttgggttcttagagttggtaagtgagaatt
ttattttgtatttttgcattgatattcagacaggaaatgtaagctctctt
ttttttaggtgtgtcatttgtttggcttagatataagtataatagtgcct
ttcatagaacaaattgggcagtgttccttctatttctattttagtggaat
agtttgaagagcattggtattagatcttctttgaaagtcttgatataatt
ctgcatttaaacttttctgatcctgggcttctcttttgttgggagaattt
ttaatgattgcttctatttctttaagggttgtggggtaattggaataaat
atactaataactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112353817_112354981
seq2: B6Ng01-229I14.b_44_1197

seq1  GAATTCTTTACCCAAAACTCAACCAATATATAAAATGTTTTTAATTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCCAAAACTCAACCAATATATAAAATGTTTTTAATTGCAA  50

seq1  ATTTAATATCATTTCCTGCCTTACCTTCCTTTCTTGGCTACTAGTTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATATCATTTCCTGCCTTACCTTCCTTTCTTGGCTACTAGTTATAT  100

seq1  AATTTGGATTATCCAGAAACTTTGCTAAGAAGTAAAGCCAAATGTTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGATTATCCAGAAACTTTGCTAAGAAGTAAAGCCAAATGTTGCAA  150

seq1  CTCTCTCTAGTTAATATGTAACTACAGAATTTATGTTATTCTTGTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTAGTTAATATGTAACTACAGAATTTATGTTATTCTTGTATTTT  200

seq1  TATGAATAATGTACAAAGCTATACATTTAAAAGCCTACATTTAGTACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATAATGTACAAAGCTATACATTTAAAAGCCTACATTTAGTACTTA  250

seq1  CATTTATTTGAAGTATTGACAACAATATTTGTCTTTGCATGTGCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTGAAGTATTGACAACAATATTTGTCTTTGCATGTGCTTTAAT  300

seq1  TTAGGAAATTCAGTTATCAGAAATATTTACTAAAAGTCACTGACATCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAATTCAGTTATCAGAAATATTTACTAAAAGTCACTGACATCCTT  350

seq1  ATTTTTCAATTAATTGCTACAAAAATCTACATTTGAAGAAAACATAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCAATTAATTGCTACAAAAATCTACATTTGAAGAAAACATAAGAA  400

seq1  ATTCCACCCTTAGCCAACTAGATCAGAAATGATCTCATCAGAGTGGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACCCTTAGCCAACTAGATCAGAAATGATCTCATCAGAGTGGAATT  450

seq1  TACTCTGCAATTCAAATTTCTTGTTTCATTTTGAAAACAATAATGGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCAATTCAAATTTCTTGTTTCATTTTGAAAACAATAATGGAGAT  500

seq1  TAGTGAAGTTAAACTCTTTTTTATTACTATTATTACCTTTTTTTCCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGTTAAACTCTTTTTTATTACTATTATTACCTTTTTTTCCCTTT  550

seq1  TTTTTACAGTCCACCCATTGGTCACCTTCTGATTCCCCATCCCACAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAGTCCACCCATTGGTCACCTTCTGATTCCCCATCCCACAGTTC  600

seq1  CTCACCCCATTCCTCCTCTTTGCCTATAAGTGGATGTTCCCACCACCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCATTCCTCCTCTTTGCCTATAAGTGGATGTTCCCACCACCATG  650

seq1  ACCAGGCCTCCCTAATCCCTGGAGCTTCAAGTCTTAAATGGAACCTACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCCTCCCTAATCCCTGGAGCTTCAAGTCTTAAATGGAACCTACTG  700

seq1  AGAAATGCTGCCAAGTCCATATAACTTTGAATCAAGCAGAATGGACTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTGCCAAGTCCATATAACTTTGAATCAAGCAGAATGGACTAAT  750

seq1  GTCAGGCTGTAAAACAATGAATGCTGTTCATTGAGACTGAAATATTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCTGTAAAACAATGAATGCTGTTCATTGAGACTGAAATATTAATG  800

seq1  GGAGATTTCAACACTAACAACATTTCAAAGTACAAGAAAGAACTTATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTTCAACACTAACAACATTTCAAAGTACAAGAAAGAACTTATCAT  850

seq1  TAAGCTGTAGCTAAAAATACAGTTTATAGGTGAAAATTTTGCTTCTGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGTAGCTAAAAATACAGTTTATAGGTGAAAATTTTGCTTCTGTTA  900

seq1  TGCTGATGGAATAAATAAAAGGTGCAAAGAA-TTCATTTTTGCAAGTCAA  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCTGATGGAATAAATAAAAGGTGCAAAGAATTTCATTTTTGCAAGTCAA  950

seq1  ATTTACTAGGAAGATATTTAAAAGAATAGCCCCAAGCCAAAAAAGAAACT  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTACTAGGAAGATATTTAAAAGAATAGCCCCAAGCC-AAAAAGAAACT  999

seq1  GTTGTAATAATGCTTATGTAG-ATAAACCGCATAATCAAAATAATCTGTT  1048
      ||||||||||||||||||||| ||||||||||| |||||||| |||||||
seq2  GTTGTAATAATGCTTATGTAGAATAAACCGCAT-ATCAAAAT-ATCTGTT  1047

seq1  CAATAAAATTTTAAGTTCCTTTGTACCAATGAATAAAATATAACATCAGC  1098
      |||||||  ||| |||| ||||||| ||||||   |||||| ||||||||
seq2  CAATAAA--TTTTAGTT-CTTTGTA-CAATGA--TAAATAT-ACATCAGC  1090

seq1  CACTGGAGACAAAATGCTTTTGGCTCTGTTTACAGTGCACATTTTGATTG  1148
      |||| ||||| ||||||||| |  ||||||||||||||||| || |||  
seq2  CACT-GAGAC-AAATGCTTTGGCTTCTGTTTACAGTGCACA-TTGGATGA  1137

seq1  AGTAAACACTATAAAAT  1165
      |||||||||||||||||
seq2  AGTAAACACTATAAAAT  1154


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