BAC Information

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BAC

Clone NameB6Ng01-230H02
Chromosome14 (Build37)
Map Location 67,445,542 - 67,498,559
singlet/doubletdoublet
Overlap geneDpysl2, EG432870
Upstream geneEsco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366
Downstream genePnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230H02.bB6Ng01-230H02.g
ACCGA043306GA043307
length9301,043
definitionB6Ng01-230H02.b B6Ng01-230H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,498,026 - 67,498,559)(67,445,542 - 67,446,585)
sequence
gaattccatgctcattaaaaaaatttgatatagtcttggcagggaagatg
gcttactcagtggctaaaatgcttgactcccaggagtatgaggactgggg
tcagagccccaaaaatccagataaatgttgagtgggtgtgtccagcctgt
aaccgaagcctctgaaggtgaaatggcatctccagagcaagctggctagg
gagactgctcagatcagtgagctctgggctcgattgagagacctgcctgg
ccttaatacataaggtagagagcagtggagggtgattccaatatccttgt
gccttcacatgtttgtgcacagatgtgtactcacacacatgcaagagcgt
gtgcacacacatgaaaacaggaaaaaaaggaaaacaagctatccacctca
ccaaactagtaatagcgtagtattttgtttaggccctcttggcacttttt
atagaaatagaaaccagtcttaactaatacggaaccacaaggaacatgac
taatctaagtgtttttgagcaagaagactagatctggaagcattaaaggt
cctgacttcaaaatatctaaaactctgtggtgacaaatacagggtagtaa
tggcttaaagacagaggcacaaaccaactgtcttagggtttctattcctg
cacaacatcatgaccaagaagcaagttggggaggaaagggtttattcagc
gtacaattccatgttgctgttcatcaccaaaggaagtcaggactggaact
caagcaggacaggtagcaggagctgatgcaaaagctatggaggagtgtta
cttactggcttactttcccctggcttactcagcctgctctctatagaacc
caagactaccagcccggggatggttccacccacaatgggccctcccccct
tgatcactaattgagaaaatgccttacagc
gaattcaggctccatctggctccacagagtggcctgaaattggacagggg
ccaaactaaaaacgctagctctctggaagaagagagtatttaagcctcgc
tctccattctccagctagaacagtccagcctctgatacacaacaaacact
gtgcactgagccctgaccaaaatctctttaaatcttgtaggaagggtgta
atcgcttaaaaataaaacctctgcttattatagagaccttgaacatctgg
gaggttgtctatgtgattttatagatggagcagaacaagcaccacaggga
aatgacctatccaaggacccatagcagagtccagacaatctctgggcaag
tccctcccgccttggcaacctacacgcctcggtcatatatcctgcgaggc
ccagctggaaaggccttccgtctgtgatggctttgctgtacagatcttct
ttggcctcaggctcttaccagctgccttttgctagtagtaagtcacattc
tggctcacagatatacttcctgtctgcggctttgtcaccagctcattgaa
agactcagggagcaccatcccctgcttgccacagatgtccaggcactgcg
gtggtcagaacatgtgcttctcaccggtaccacctcagacaggtgatccc
tagatccggcattcctaccggtctcccttttcccagcttcttgagggggg
aatcctacggagctgcgagctgtgcacatggtagactgcgaagagcagca
tacagcggcaggaagctggccgccctgcacagttcaaaccaagctggcca
tcatggtgctacagacggacgagatcctgacactacacaaagttaaaaca
ttagtgttgcctcctatgtgctggggggtctcttcctaaagtggctgtat
ggccaattccattcagagtggttccatgttgattctctgtgtcgcccccc
tcaagagttaaacacaaaaagactcagcttgacagaagaaaacagccacc
atcaggaagaacagccaagggtgaagggcttcgaatctattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67498026_67498559
seq2: B6Ng01-230H02.b_48_581 (reverse)

seq1  GATCTAGTCTTCTTGCTCAAAAACACTTAGATTAGTCATGTTCCTTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGTCTTCTTGCTCAAAAACACTTAGATTAGTCATGTTCCTTGTGG  50

seq1  TTCCGTATTAGTTAAGACTGGTTTCTATTTCTATAAAAAGTGCCAAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTATTAGTTAAGACTGGTTTCTATTTCTATAAAAAGTGCCAAGAGG  100

seq1  GCCTAAACAAAATACTACGCTATTACTAGTTTGGTGAGGTGGATAGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAACAAAATACTACGCTATTACTAGTTTGGTGAGGTGGATAGCTTG  150

seq1  TTTTCCTTTTTTTCCTGTTTTCATGTGTGTGCACACGCTCTTGCATGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTTTTTCCTGTTTTCATGTGTGTGCACACGCTCTTGCATGTGT  200

seq1  GTGAGTACACATCTGTGCACAAACATGTGAAGGCACAAGGATATTGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTACACATCTGTGCACAAACATGTGAAGGCACAAGGATATTGGAAT  250

seq1  CACCCTCCACTGCTCTCTACCTTATGTATTAAGGCCAGGCAGGTCTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCACTGCTCTCTACCTTATGTATTAAGGCCAGGCAGGTCTCTCA  300

seq1  ATCGAGCCCAGAGCTCACTGATCTGAGCAGTCTCCCTAGCCAGCTTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGCCCAGAGCTCACTGATCTGAGCAGTCTCCCTAGCCAGCTTGCTC  350

seq1  TGGAGATGCCATTTCACCTTCAGAGGCTTCGGTTACAGGCTGGACACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGCCATTTCACCTTCAGAGGCTTCGGTTACAGGCTGGACACACC  400

seq1  CACTCAACATTTATCTGGATTTTTGGGGCTCTGACCCCAGTCCTCATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACATTTATCTGGATTTTTGGGGCTCTGACCCCAGTCCTCATACT  450

seq1  CCTGGGAGTCAAGCATTTTAGCCACTGAGTAAGCCATCTTCCCTGCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGTCAAGCATTTTAGCCACTGAGTAAGCCATCTTCCCTGCCAAG  500

seq1  ACTATATCAAATTTTTTTAATGAGCATGGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  ACTATATCAAATTTTTTTAATGAGCATGGAATTC  534

seq1: chr14_67445542_67446585
seq2: B6Ng01-230H02.g_68_1110

seq1  GAATTCAGGCTCCATCTGGCTCCACAGAGTGGCCTGAAATTGGACAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTCCATCTGGCTCCACAGAGTGGCCTGAAATTGGACAGGGG  50

seq1  CCAAACTAAAAACGCTAGCTCTCTGGAAGAAGAGAGTATTTAAGCCTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTAAAAACGCTAGCTCTCTGGAAGAAGAGAGTATTTAAGCCTCGC  100

seq1  TCTCCATTCTCCAGCTAGAACAGTCCAGCCTCTGATACACAACAAACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTCTCCAGCTAGAACAGTCCAGCCTCTGATACACAACAAACACT  150

seq1  GTGCACTGAGCCCTGACCAAAATCTCTTTAAATCTTGTAGGAAGGGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTGAGCCCTGACCAAAATCTCTTTAAATCTTGTAGGAAGGGTGTA  200

seq1  ATCGCTTAAAAATAAAACCTCTGCTTATTATAGAGACCTTGAACATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCTTAAAAATAAAACCTCTGCTTATTATAGAGACCTTGAACATCTGG  250

seq1  GAGGTTGTCTATGTGATTTTATAGATGGAGCAGAACAAGCACCACAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTCTATGTGATTTTATAGATGGAGCAGAACAAGCACCACAGGGA  300

seq1  AATGACCTATCCAAGGACCCATAGCAGAGTCCAGACAATCTCTGGGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTATCCAAGGACCCATAGCAGAGTCCAGACAATCTCTGGGCAAG  350

seq1  TCCCTCCCGCCTTGGCAACCTACACGCCTCGGTCATATATCCTGCGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCGCCTTGGCAACCTACACGCCTCGGTCATATATCCTGCGAGGC  400

seq1  CCAGCTGGAAAGGCCTTCCGTCTGTGATGGCTTTGCTGTACAGATCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGAAAGGCCTTCCGTCTGTGATGGCTTTGCTGTACAGATCTTCT  450

seq1  TTGGCCTCAGGCTCTTACCAGCTGCCTTTTGCTAGTAGTAAGTCACATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTCAGGCTCTTACCAGCTGCCTTTTGCTAGTAGTAAGTCACATTC  500

seq1  TGGCTCACAGATATACTTCCTGTCTGCGGCTTTGTCACCAGCTCATTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACAGATATACTTCCTGTCTGCGGCTTTGTCACCAGCTCATTGAA  550

seq1  AGACTCAGGGAGCACCATCCCCTGCTTGCCACAGATGTCCAGGCACTGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGGGAGCACCATCCCCTGCTTGCCACAGATGTCCAGGCACTGCG  600

seq1  GTGGTCAGAACATGTGCTTCTCACCGGTACCACCTCAGACAGGTGATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCAGAACATGTGCTTCTCACCGGTACCACCTCAGACAGGTGATCCC  650

seq1  TAGATCCGGCATTCCTACCGGTCTCCCTTTTCCCAGCTTCTTGAGGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCGGCATTCCTACCGGTCTCCCTTTTCCCAGCTTCTTGAGGGGGG  700

seq1  AATCCTACGGAGCTGCGAGCTGTGCACATGGTAGACTGCGAAGAGCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTACGGAGCTGCGAGCTGTGCACATGGTAGACTGCGAAGAGCAGCA  750

seq1  TACAGCGGCAGGAAGCTGGCCGCCCTGCACAGTTCAAACCAAGCTGGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCGGCAGGAAGCTGGCCGCCCTGCACAGTTCAAACCAAGCTGGCCA  800

seq1  TCATGGTGCTACAGACGGACGAGATCCTGACACTACACAAAGTTAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGCTACAGACGGACGAGATCCTGACACTACACAAAGTTAAAACA  850

seq1  TTAGTGTTGCCTCCTATGTGCTGGGGGGTCTCTTCCTAAAGTGGGCTGTA  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTAGTGTTGCCTCCTATGTGCTGGGGGGTCTCTTCCTAAAGT-GGCTGTA  899

seq1  TGGCCAAGTCCATTCAGAGTGGTTCCATGTTTGATTCTCTGTGTCG-CCC  949
      ||||||| ||||||||||||||||||||| |||||||||||||||| |||
seq2  TGGCCAATTCCATTCAGAGTGGTTCCATG-TTGATTCTCTGTGTCGCCCC  948

seq1  CCTCAAGAGTTTAAAACACAAAAGACTCAGCTTGACAGAAG-AAACAGCC  998
      ||||||||||| || ||| |||||||||||||||||||||| ||||||||
seq2  CCTCAAGAGTTAAACACA-AAAAGACTCAGCTTGACAGAAGAAAACAGCC  997

seq1  ACCATCAGGAAGAACAG-CAAGGGTGAAGGGCTCGAAATCTTATTCT  1044
      ||||||||||||||||| |||||||||||||||   |||| ||||||
seq2  ACCATCAGGAAGAACAGCCAAGGGTGAAGGGCTTCGAATC-TATTCT  1043