BAC Information

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BAC

Clone NameB6Ng01-232N22
Chromosome14 (Build37)
Map Location 32,208,000 - 32,375,092
singlet/doubletdoublet
Overlap geneSh3bp5, Mettl6, Eaf1, Colq
Upstream geneCacna1d, LOC665399, Dcp1a, Tkt, Prkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7
Downstream geneHacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232N22.bB6Ng01-232N22.g
ACCGA045096GA045097
length269470
definitionB6Ng01-232N22.b B6Ng01-232N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,374,824 - 32,375,092)(32,208,000 - 32,208,475)
sequence
ctttagagtgattaactgggggaatcaggggcagctacaactgtgagatg
cagaaatccaaattcaagctggagtcttagtcaagaaagggaggcagtaa
agtttgaccaaactttggtcaaggggagggggcagtctttgctggtatgc
ttcttcggtccacccatcaaagtctgaagatgggactatagatttgaagt
gctctaggactggtgggatcctacactctgctccctaatatgtagacttt
tgaaaatgtgtgtgtgtgt
aatatgtagacaggctggcctcaaacctaaagagatctgtctatctctac
cttgtaagtgctgggattaaaggcatgcctggccagtctcctgagtgtcc
acaagcacacacatcacacttaggctaagtgccacctgatgtactctgtc
aactctcacttggttcattttttgtgacacaactcttcctttaaaatcaa
aactatgtcactggttgagcaacagtacagctgagcgcaaaagacacatc
tgttcccagcccaaggctttaagcctggccggtccaaactatggccctca
ggctgcctgtgtcccaggttgcctatgagcacagcccaacatatttgtag
atgacatgctgtctgtcagtgccgaaaagttggacgcctgctttaaacca
gtcacaaccacacagttttcaaagatttgtttctaacgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32374824_32375092
seq2: B6Ng01-232N22.b_54_322 (reverse)

seq1  ACACACACACACATTTTCAAAAGTCTACATATTAGGGAGCAGAGTGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACATTTTCAAAAGTCTACATATTAGGGAGCAGAGTGTAGG  50

seq1  ATCCCACCAGTCCTAGAGCACTTCAAATCTATAGTCCCATCTTCAGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCAGTCCTAGAGCACTTCAAATCTATAGTCCCATCTTCAGACTT  100

seq1  TGATGGGTGGACCGAAGAAGCATACCAGCAAAGACTGCCCCCTCCCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGTGGACCGAAGAAGCATACCAGCAAAGACTGCCCCCTCCCCTTG  150

seq1  ACCAAAGTTTGGTCAAACTTTACTGCCTCCCTTTCTTGACTAAGACTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGTTTGGTCAAACTTTACTGCCTCCCTTTCTTGACTAAGACTCCA  200

seq1  GCTTGAATTTGGATTTCTGCATCTCACAGTTGTAGCTGCCCCTGATTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAATTTGGATTTCTGCATCTCACAGTTGTAGCTGCCCCTGATTCCC  250

seq1  CCAGTTAATCACTCTAAAG  269
      |||||||||||||||||||
seq2  CCAGTTAATCACTCTAAAG  269

seq1: chr14_32208000_32208475
seq2: B6Ng01-232N22.g_68_543

seq1  GAATTCAATATGTAGACAGGCTGGCCTCAAACCTAAAGAGATCTGTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATGTAGACAGGCTGGCCTCAAACCTAAAGAGATCTGTCTAT  50

seq1  CTCTACCTTGTAAGTGCTGGGATTAAAGGCATGCCTGGCCAGTCTCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTTGTAAGTGCTGGGATTAAAGGCATGCCTGGCCAGTCTCCTGA  100

seq1  GTGTCCACAAGCACACACATCACACTTAGGCTAAGTGCCACCTGATGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCACAAGCACACACATCACACTTAGGCTAAGTGCCACCTGATGTAC  150

seq1  TCTGTCAACTCTCACTTGGTTCATTTTTTGTGACACAACTCTTCCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAACTCTCACTTGGTTCATTTTTTGTGACACAACTCTTCCTTTAA  200

seq1  AATCAAAACTATGTCACTGGTTGAGCAACAGTACAGCTGAGCGCAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAACTATGTCACTGGTTGAGCAACAGTACAGCTGAGCGCAAAAGA  250

seq1  CACATCTGTTCCCAGCCCAAGGCTTTAAGCCTGGCCGGTCCAAACTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGTTCCCAGCCCAAGGCTTTAAGCCTGGCCGGTCCAAACTATGG  300

seq1  CCCTCAGGCTGCCTGTGTCCCAGGTTGCCTATGAGCACAGCCCAACATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGCTGCCTGTGTCCCAGGTTGCCTATGAGCACAGCCCAACATAT  350

seq1  TTGTAGATGACATGCTGTCTGTCAGTGCCGAAAAGTTGGACGCCTGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGATGACATGCTGTCTGTCAGTGCCGAAAAGTTGGACGCCTGCTTT  400

seq1  AAACCAGTCACAACCACACAGTTTTCAAAGATTTGTTTCTAACGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGTCACAACCACACAGTTTTCAAAGATTTGTTTCTAACGTGTGTG  450

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTG  476
      ||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTG  476