BAC Information

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BAC

Clone NameB6Ng01-233N23
Chromosome14 (Build37)
Map Location 90,509,916 - 90,604,272
singlet/doubletdoublet
Overlap genenone
Upstream geneEG328451
Downstream geneLOC100043336, EG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233N23.bB6Ng01-233N23.g
ACCGA045804GA045805
length6721,031
definitionB6Ng01-233N23.b B6Ng01-233N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,603,601 - 90,604,272)(90,509,916 - 90,510,823)
sequence
gaattctttccctctacatctttgccaaatgttaccttcatttttacttg
ccttttcaaatttcttttgagaatttcacagatcaatacaatatgtacgc
aattcttttcctttctttaatatctctaatgtcctccttcctctcagaat
catgttattttattcctaaactattattgcatacatatatacatattaat
tcatagatatgaccacctgactccctgttttgcttgtaagtatatgtggt
taggtttgaccacttgagactggatgtgcaattgtgaagattatgtttgg
aaagagattttacccttcttacagaggccattcctttgtagcttttcagc
tatgagaggccgctatgagaccaccccccacccctactggcatgcccact
ggtattgtctttacttatatcttatttaggcaatcatgctgataagattt
aatgggtgcagattccctgttataattagaaggtactatggttctctgcc
tcttaatatcatctcagctcctattctataatgtttactgaaccttaggc
atgggagttgtgctgtagatgaatcatttggggctaggtaagccagggcc
agatgttctctgaatttaaatagttttgtttttctctaatagtctcggtc
tgatgaaaaaaaaaaatcatgg

gaattccatgttattccccattttctcctctatctgactcagtagatatg
ccattacattgaggtctttaattctgttgaagttcagttgtattctactg
gtggcaagtagctctccagtttgagcagcaccgtcaattgaagatactgt
ccttttaccaatggggttttatgactccctgtcaggtctgtataggtgca
taaatttatacctgggtcttcaattccattccactgaccaatatgcatat
tttgtataattatcatgctgctttgactatatttttttcttcaatataac
ttggactctgggaagttgatagcagcaacatatttacttttatttttgtt
gtttttaatttcaatggtattttttgttttattgttctagcaattctttt
tatggatgggtgtttttttcttcagtgtctccatgagaagccaaaaattg
ttctttcaagagatgggtataattatgttggagttttgatgttttgatgt
ggattacatttaacttgtctattgacatttattgaatgacaattattact
atattaatattactggcctattagcataggagttcattcctttttatagt
tttcttcactgagatttgccttgtgttccagtagcagttttattttattt
tatttttaatttatattttacactccatgttccattccctgaacccccat
ccaccatctgactgttccacatcctacaactcctccccaccccaccctgt
ctccacgtgggatgcccccacccctacccacttgacctctaaattccctg
ggggccctccagtctcttgatgagttagggtgtatccagagcacattttc
atatttgaaacatacaaggacaatcatgaaaaatatgacttgtagaattt
gttaaaaaaaagttcccttaagaaccaacattggtctcatgatgttgttt
actatagaatctttgcccaatcccacacatttccccatcccattttcttt
cttgccataatgattttccctgccaacatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90603601_90604272
seq2: B6Ng01-233N23.b_47_718 (reverse)

seq1  CCATGATTTTTTTTTTTCATCAGACCGAGACTATTAGAGAAAAACAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATTTTTTTTTTTCATCAGACCGAGACTATTAGAGAAAAACAAAAC  50

seq1  TATTTAAATTCAGAGAACATCTGGCCCTGGCTTACCTAGCCCCAAATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAATTCAGAGAACATCTGGCCCTGGCTTACCTAGCCCCAAATGAT  100

seq1  TCATCTACAGCACAACTCCCATGCCTAAGGTTCAGTAAACATTATAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTACAGCACAACTCCCATGCCTAAGGTTCAGTAAACATTATAGAAT  150

seq1  AGGAGCTGAGATGATATTAAGAGGCAGAGAACCATAGTACCTTCTAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGAGATGATATTAAGAGGCAGAGAACCATAGTACCTTCTAATTA  200

seq1  TAACAGGGAATCTGCACCCATTAAATCTTATCAGCATGATTGCCTAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGGAATCTGCACCCATTAAATCTTATCAGCATGATTGCCTAAATA  250

seq1  AGATATAAGTAAAGACAATACCAGTGGGCATGCCAGTAGGGGTGGGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAGTAAAGACAATACCAGTGGGCATGCCAGTAGGGGTGGGGGGT  300

seq1  GGTCTCATAGCGGCCTCTCATAGCTGAAAAGCTACAAAGGAATGGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATAGCGGCCTCTCATAGCTGAAAAGCTACAAAGGAATGGCCTCT  350

seq1  GTAAGAAGGGTAAAATCTCTTTCCAAACATAATCTTCACAATTGCACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAGGGTAAAATCTCTTTCCAAACATAATCTTCACAATTGCACATC  400

seq1  CAGTCTCAAGTGGTCAAACCTAACCACATATACTTACAAGCAAAACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCAAGTGGTCAAACCTAACCACATATACTTACAAGCAAAACAGGG  450

seq1  AGTCAGGTGGTCATATCTATGAATTAATATGTATATATGTATGCAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGTGGTCATATCTATGAATTAATATGTATATATGTATGCAATAAT  500

seq1  AGTTTAGGAATAAAATAACATGATTCTGAGAGGAAGGAGGACATTAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGAATAAAATAACATGATTCTGAGAGGAAGGAGGACATTAGAGA  550

seq1  TATTAAAGAAAGGAAAAGAATTGCGTACATATTGTATTGATCTGTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGAAAGGAAAAGAATTGCGTACATATTGTATTGATCTGTGAAAT  600

seq1  TCTCAAAAGAAATTTGAAAAGGCAAGTAAAAATGAAGGTAACATTTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAGAAATTTGAAAAGGCAAGTAAAAATGAAGGTAACATTTGGCA  650

seq1  AAGATGTAGAGGGAAAGAATTC  672
      ||||||||||||||||||||||
seq2  AAGATGTAGAGGGAAAGAATTC  672


seq1: chr14_90509916_90510823
seq2: B6Ng01-233N23.g_176_1096

seq1  GCTCTCCAGTTTGAGCAGCACCGTCAATTGAAGATACTGTCCTTTTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCAGTTTGAGCAGCACCGTCAATTGAAGATACTGTCCTTTTACCA  50

seq1  ATGGGGTTTTATGACTCCCTGTCAGGTCTGTATAGGTGCATAAATTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTTTATGACTCCCTGTCAGGTCTGTATAGGTGCATAAATTTATA  100

seq1  CCTGGGTCTTCAATTCCATTCCACTGACCAATATGCATATTTTGTATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTCTTCAATTCCATTCCACTGACCAATATGCATATTTTGTATAAT  150

seq1  TATCATGCTGCTTTGACTATATTTTTTTCTTCAATATAACTTGGACTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGCTGCTTTGACTATATTTTTTTCTTCAATATAACTTGGACTCTG  200

seq1  GGAAGTTGATAGCAGCAACATATTTACTTTTATTTTTGTTGTTTTTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTGATAGCAGCAACATATTTACTTTTATTTTTGTTGTTTTTAATT  250

seq1  TCAATGGTATTTTTTGTTTTATTGTTCTAGCAATTCTTTTTATGGATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTATTTTTTGTTTTATTGTTCTAGCAATTCTTTTTATGGATGGG  300

seq1  TGTTTTTTTCTTCAGTGTCTCCATGAGAAGCCAAAAATTGTTCTTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTCTTCAGTGTCTCCATGAGAAGCCAAAAATTGTTCTTTCAAG  350

seq1  AGATGGGTATAATTATGTTGGAGTTTTGATGTTTTGATGTGGATTACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGTATAATTATGTTGGAGTTTTGATGTTTTGATGTGGATTACATT  400

seq1  TAACTTGTCTATTGACATTTATTGAATGACAATTATTACTATATTAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGTCTATTGACATTTATTGAATGACAATTATTACTATATTAATAT  450

seq1  TACTGGCCTATTAGCATAGGAGTTCATTCCTTTTTATAGTTTTCTTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCCTATTAGCATAGGAGTTCATTCCTTTTTATAGTTTTCTTCACT  500

seq1  GAGATTTGCCTTGTGTTCCAGTAGCAGTTTTATTTTATTTTATTTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGCCTTGTGTTCCAGTAGCAGTTTTATTTTATTTTATTTTTAAT  550

seq1  TTATATTTTACACTCCATGTTCCATTCCCTGAACCCCCATCCACCATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTACACTCCATGTTCCATTCCCTGAACCCCCATCCACCATCTG  600

seq1  ACTGTTCCACATCCTACAACTCCTCCCCACCCCACCCTGTCTCCACGT-G  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTGTTCCACATCCTACAACTCCTCCCCACCCCACCCTGTCTCCACGTGG  650

seq1  GATGCCCCCACCCCTACCCACTTGACCTCTAAATTCCCTGGGG--CCTCC  697
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  GATGCCCCCACCCCTACCCACTTGACCTCTAAATTCCCTGGGGGCCCTCC  700

seq1  AGTCTCTTGA-GAGTTA-GGTGTATCAAGAGCACA-TTTCATA-TTGGAA  743
      |||||||||| |||||| |||||||| |||||||| ||||||| ||| ||
seq2  AGTCTCTTGATGAGTTAGGGTGTATCCAGAGCACATTTTCATATTTGAAA  750

seq1  CATAC-AGGAC-ATCATG-AAAATATGACCTGTAGAATTTGTT-AAAAAT  789
      ||||| ||||| |||||| |||||||||| ||||||||||||| ||||| 
seq2  CATACAAGGACAATCATGAAAAATATGACTTGTAGAATTTGTTAAAAAAA  800

seq1  AGTTTCCTT-AGAACCAACATTGGTTCTCATGAGGTTG-TTACTATAGAC  837
      |||| |||| |||||||||||||| |||||||| |||| |||||||||| 
seq2  AGTTCCCTTAAGAACCAACATTGG-TCTCATGATGTTGTTTACTATAGAA  849

seq1  TCTTTCCCCAAT-CCACACATTCCCCCATCCCACTTTCTTTCTTGCCAT-  885
      ||||| |||||| ||||||||| |||||||||| ||||||||||||||| 
seq2  TCTTTGCCCAATCCCACACATTTCCCCATCCCATTTTCTTTCTTGCCATA  899

seq1  ATGAATTTCCCTGTCAAACATAG  908
      |||| |||||||| | |||||||
seq2  ATGATTTTCCCTG-CCAACATAG  921


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