BAC Information

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BAC

Clone NameB6Ng01-234B14
Chromosome14 (Build37)
Map Location 32,469,226 - 32,597,706
singlet/doubletdoublet
Overlap geneBtd, Ankrd28
Upstream geneRft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1
Downstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234B14.bB6Ng01-234B14.g
ACCGA045956GA045957
length1,1141,121
definitionB6Ng01-234B14.b B6Ng01-234B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,596,582 - 32,597,706)(32,469,226 - 32,470,361)
sequence
gaattctctgagctctgagtttcagaaggatttggtacagaccttccatt
tagactccgcgtaatgtctgactgggtctcttcatcttgttttagacaat
ttaaattttaccagttttgcctatcgtttttttgtttgtttgtttgagac
agggtttctctgtgtagccctggctgtcctggaactcactctgtagacca
ggctggcctcgaactcagaaatctgcctgcctctgcctcccgagtgctgg
gattaaaggcgtgcaccaccacgcctggcacgtattttctaagtatttga
catattacacatagagaaaatatgacactatttgttcagttagtgctatg
gtattttttggtacatgtttttaaaataaataatcttgttcagggtggtt
ttatgtatatttttaggtgactacagtatattagacttttagtagaattg
tccaggtcttgccatcctttatgaaattttctactgatgtgtcagtactt
ctttttccaatcatgggtgtagatgctgagatgggtgctttaagttaaac
tttaaatttttttatagaataaattttatgtaaagaatgattgggaaaat
gtaagtatagaagttaggctcagaccataaataaataaataaataaataa
ataagttgtgacttctttagtccaagtagatgaatttacacactagagac
tttggaacaagtgaaaattactcctataaaaagaggtcctattttggaga
aaaaccctgaaaatggacaacagaatagtactataatttcatttttgttt
caagtattaggatgatatattcggtacaactctatggagatggataacat
catttatatgttacagtatttgcatacttatcttaaaaacattttctgta
ttttaaagtaaccagtagaagcagacatgggtggcatgtagctagagttc
catctattagggaggttgaagcaagcagatccatttccctgcaaagttct
aggtcaactgagcaacatagcagaaactgtgttattctctagatgatgtt
tttatgatttttagtaatttatttttatattcctgcatctgctatattgg
gttttttttttctt
gaattctcagaatattgcccaggttggtcttgaatgagattatcctcttg
ggcagcctcctgatggctgggctcatataacactcttcctggcatttggt
ggattcgatgatggctcttgggagctgtgagctttacagaagaggaaact
acctggagatgccgccctgtgggctctcctcacggctcagccacggttgt
gttttcctgtgaactctgatgtggcgtgaaaagtgcattatgctttgtag
aataaggctgggtgacttctcagagaattcagtatactctgctgccctgt
tttgtttgttttaagtcggtgactggagggaaagctgtagcattggttat
ctaaggtgttcctggtctggctaaggtgagcaccaagtctgttaaccagc
tgcctttatttcacatctgtggctgctaagacaacctgacccaaagtaac
atggggcaggaagcggtgtgtctggcttacagttccaggtcgcagttcgt
tatagccgacaggtaaggcaggagcgtcagtcacacccaccatctaaagc
tgagagagaagggtgactgctcctggctcctcctgtcttagtctctgccc
atccattagccgcacacacacatacctgcaggccagcccaggtaatccct
cagtgacctctcttcctaggagacgctaggtgtgtcccaccacatcagcc
aaatgttgccaaactgttggcaggaagttctcatcactgaaaacactttg
aaatctattcacatcctatcagggcctaaggaaaagcatctgagaaataa
aggtgatgcttttgagttctggcctaggaagaatgaatcttaaaacagcc
aaatgtttcagtattttcattattaagtagatgggcaagatattagaagt
ggaaagagaaggggaaaaccaaaacccattgctactgcccgagtctgtcg
cccactggtgttattctcagtttgtcaccaggtgaagtcacacctgcaaa
atcagtcagctgggtgttccctccatacattgttacacacaagaccctct
actttaactaaccctgtgcaccacagagatactaagtaatgagctgacct
tagagtcctgcacatgctgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32596582_32597706
seq2: B6Ng01-234B14.b_49_1162 (reverse)

seq1  AAGAAAAAAAAAAACACAATATAGGCAAGAATGCCAGAAATTATAAAAAT  50
      ||| ||||||||||| ||||||| |||   ||||  |||  |||||||||
seq2  AAG-AAAAAAAAAACCCAATATA-GCA--GATGCAGGAA--TATAAAAAT  44

seq1  AAATTACTAAAAATCATAAAACATTCATCTAAGGAAGAAATAACACAGTT  100
      |||||||||||||||||||||   |||||||  |    ||||||||||||
seq2  AAATTACTAAAAATCATAAAAACATCATCTAGAG----AATAACACAGTT  90

seq1  TCTTGCTATGTTGCTCAGGTTGACCTAGAACTTTTGCAGGG-AATGGATC  149
      || |||||||||||||| ||||||||||||| ||||||||| ||||||||
seq2  TC-TGCTATGTTGCTCA-GTTGACCTAGAAC-TTTGCAGGGAAATGGATC  137

seq1  TGCTTGCTTCAACCTCCCTAATAGATGGAACTCTAGCTACATGCCA-CCA  198
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCTTGCTTCAACCTCCCTAATAGATGGAACTCTAGCTACATGCCACCCA  187

seq1  TGTCTGCTTCTACTGGTTACTTTAAAATACAGAAAATGTTTTTAAGATAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTCTACTGGTTACTTTAAAATACAGAAAATGTTTTTAAGATAA  237

seq1  GTATGCAAATACTGTAACATATAAATGATGTTATCCATCTCCATAGAGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAAATACTGTAACATATAAATGATGTTATCCATCTCCATAGAGTT  287

seq1  GTACCGAATATATCATCCTAATACTTGAAACAAAAATGAAATTATAGTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCGAATATATCATCCTAATACTTGAAACAAAAATGAAATTATAGTAC  337

seq1  TATTCTGTTGTCCATTTTCAGGGTTTTTCTCCAAAATAGGACCTCTTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTTGTCCATTTTCAGGGTTTTTCTCCAAAATAGGACCTCTTTTT  387

seq1  ATAGGAGTAATTTTCACTTGTTCCAAAGTCTCTAGTGTGTAAATTCATCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGTAATTTTCACTTGTTCCAAAGTCTCTAGTGTGTAAATTCATCT  437

seq1  ACTTGGACTAAAGAAGTCACAACTTATTTATTTATTTATTTATTTATTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGACTAAAGAAGTCACAACTTATTTATTTATTTATTTATTTATTTA  487

seq1  TGGTCTGAGCCTAACTTCTATACTTACATTTTCCCAATCATTCTTTACAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGAGCCTAACTTCTATACTTACATTTTCCCAATCATTCTTTACAT  537

seq1  AAAATTTATTCTATAAAAAAATTTAAAGTTTAACTTAAAGCACCCATCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATTCTATAAAAAAATTTAAAGTTTAACTTAAAGCACCCATCTC  587

seq1  AGCATCTACACCCATGATTGGAAAAAGAAGTACTGACACATCAGTAGAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTACACCCATGATTGGAAAAAGAAGTACTGACACATCAGTAGAAA  637

seq1  ATTTCATAAAGGATGGCAAGACCTGGACAATTCTACTAAAAGTCTAATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAAAGGATGGCAAGACCTGGACAATTCTACTAAAAGTCTAATAT  687

seq1  ACTGTAGTCACCTAAAAATATACATAAAACCACCCTGAACAAGATTATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGTCACCTAAAAATATACATAAAACCACCCTGAACAAGATTATTT  737

seq1  ATTTTAAAAACATGTACCAAAAAATACCATAGCACTAACTGAACAAATAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAACATGTACCAAAAAATACCATAGCACTAACTGAACAAATAG  787

seq1  TGTCATATTTTCTCTATGTGTAATATGTCAAATACTTAGAAAATACGTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATTTTCTCTATGTGTAATATGTCAAATACTTAGAAAATACGTGC  837

seq1  CAGGCGTGGTGGTGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCGTGGTGGTGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCA  887

seq1  GGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGG  937

seq1  ACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAACAAACAAACAAAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAACAAACAAACAAAAAA  987

seq1  ACGATAGGCAAAACTGGTAAAATTTAAATTGTCTAAAACAAGATGAAGAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATAGGCAAAACTGGTAAAATTTAAATTGTCTAAAACAAGATGAAGAG  1037

seq1  ACCCAGTCAGACATTACGCGGAGTCTAAATGGAAGGTCTGTACCAAATCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTCAGACATTACGCGGAGTCTAAATGGAAGGTCTGTACCAAATCC  1087

seq1  TTCTGAAACTCAGAGCTCAGAGAATTC  1125
      |||||||||||||||||||||||||||
seq2  TTCTGAAACTCAGAGCTCAGAGAATTC  1114

seq1: chr14_32469226_32470361
seq2: B6Ng01-234B14.g_68_1188

seq1  GAATTCTCAGAATATTGCCCAGGTTGGTCTTGAATGAGATTATCCTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAATATTGCCCAGGTTGGTCTTGAATGAGATTATCCTCTTG  50

seq1  GGCAGCCTCCTGATGGCTGGGCTCATATAACACTCTTCCTGGCATTTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCTCCTGATGGCTGGGCTCATATAACACTCTTCCTGGCATTTGGT  100

seq1  GGATTCGATGATGGCTCTTGGGAGCTGTGAGCTTTACAGAAGAGGAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCGATGATGGCTCTTGGGAGCTGTGAGCTTTACAGAAGAGGAAACT  150

seq1  ACCTGGAGATGCCGCCCTGTGGGCTCTCCTCACGGCTCAGCCACGGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGATGCCGCCCTGTGGGCTCTCCTCACGGCTCAGCCACGGTTGT  200

seq1  GTTTTCCTGTGAACTCTGATGTGGCGTGAAAAGTGCATTATGCTTTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTGTGAACTCTGATGTGGCGTGAAAAGTGCATTATGCTTTGTAG  250

seq1  AATAAGGCTGGGTGACTTCTCAGAGAATTCAGTATACTCTGCTGCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGCTGGGTGACTTCTCAGAGAATTCAGTATACTCTGCTGCCCTGT  300

seq1  TTTGTTTGTTTTAAGTCGGTGACTGGAGGGAAAGCTGTAGCATTGGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTAAGTCGGTGACTGGAGGGAAAGCTGTAGCATTGGTTAT  350

seq1  CTAAGGTGTTCCTGGTCTGGCTAAGGTGAGCACCAAGTCTGTTAACCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTGTTCCTGGTCTGGCTAAGGTGAGCACCAAGTCTGTTAACCAGC  400

seq1  TGCCTTTATTTCACATCTGTGGCTGCTAAGACAACCTGACCCAAAGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTATTTCACATCTGTGGCTGCTAAGACAACCTGACCCAAAGTAAC  450

seq1  ATGGGGCAGGAAGCGGTGTGTCTGGCTTACAGTTCCAGGTCGCAGTTCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCAGGAAGCGGTGTGTCTGGCTTACAGTTCCAGGTCGCAGTTCGT  500

seq1  TATAGCCGACAGGTAAGGCAGGAGCGTCAGTCACACCCACCATCTAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCGACAGGTAAGGCAGGAGCGTCAGTCACACCCACCATCTAAAGC  550

seq1  TGAGAGAGAAGGGTGACTGCTCCTGGCTCCTCCTGTCTTAGTCTCTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGAAGGGTGACTGCTCCTGGCTCCTCCTGTCTTAGTCTCTGCCC  600

seq1  ATCCATTAGCCGCACACACACATACCTGCAGGCCAGCCCAGGTAATCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTAGCCGCACACACACATACCTGCAGGCCAGCCCAGGTAATCCCT  650

seq1  CAGTGACCTCTCTTCCTAGGAGACGCTAGGTGTGTCCCACCACATCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACCTCTCTTCCTAGGAGACGCTAGGTGTGTCCCACCACATCAGCC  700

seq1  AAATGTTGCCAAACTGTTGGCAGGAAGTTCTCATCACTGAAAACACTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGCCAAACTGTTGGCAGGAAGTTCTCATCACTGAAAACACTTTG  750

seq1  AAATCTATTCACATCCTATCAGGGCCTAAGGAAAAGCATCTGAGAAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATTCACATCCTATCAGGGCCTAAGGAAAAGCATCTGAGAAATAA  800

seq1  AGGTGATGCTTTTGAGTTCTGGCCTAGGAAGAATGAATCTTAAAACAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATGCTTTTGAGTTCTGGCCTAGGAAGAATGAATCTTAAAACAGCC  850

seq1  AAATGTTTCAGTATTTTCATTATTAAGTAGATGGGCAAGATATTAGAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTCAGTATTTTCATTATTAAGTAGATGGGCAAGATATTAGAAGT  900

seq1  GGAAAGAGAAGGGGAAAACCAAAACCCATTGCTACTGCCCGAGTCTGTCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGAAGGGGAAAACCAAAACCCATTGCTACTGCCCGAGTCTGTCG  950

seq1  CCCACTGGTGTTATTCTCAGTTTGTCCACCAGGTGGAAGTCACACCTGCA  1000
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  CCCACTGGTGTTATTCTCAGTTTGT-CACCAGGT-GAAGTCACACCTGCA  998

seq1  AAATCAGTCAGCTGGGTGTTTCCCTCCATACATTGGTACACACAAAGACC  1050
      |||||||||||||||||| |||||||||||||||| ||||||| ||||||
seq2  AAATCAGTCAGCTGGGTG-TTCCCTCCATACATTGTTACACAC-AAGACC  1046

seq1  CTCCTTACCTTAAACTTAAACCCTGTGGCACCACAGGAAGATACTTAAAG  1100
      |||  || ||| ||||  |||||||| |||||||||  |||||||  |||
seq2  CTC--TA-CTTTAACT--AACCCTGT-GCACCACAG--AGATACT--AAG  1086

seq1  TAGTGAGCCTGGACCTAGAGCCCTGCACATGCTGCC  1136
      || |||| |||  | ||||| |||||||||||||||
seq2  TAATGAG-CTGACCTTAGAGTCCTGCACATGCTGCC  1121