BAC Information

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BAC

Clone NameB6Ng01-235P19
Chromosome14 (Build37)
Map Location 25,990,393 - 26,138,742
singlet/doubletdoublet
Overlap genenone
Upstream geneDlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24, LOC669315, LOC100039411
Downstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235P19.bB6Ng01-235P19.g
ACCGA047322GA047323
length1,0611,052
definitionB6Ng01-235P19.b B6Ng01-235P19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,137,696 - 26,138,742)(25,990,393 - 25,991,456)
sequence
gaattcagctgacaatcgtctgacctccacactgcctcagccccatcctg
tgacgtccctatagatggccataatcagccctgtcacagctgtaggctgc
ttccgaattctcgacgcaggccctggttcctcatctctgtgtggaggacc
cgcgaggcctaaggcttcccgctcctgaggcaggctactccagaggagca
ctgagagtccctgagctaatcgacagcgggcttatcattggctgaagagg
tatgtgccagccaggcagccagtttactggattctggtcttgctctaact
tctgtggttcgttggacctaagttccattatgagacggacttggcagcag
cgcatgggcagtgcattggagcacaggaaacttccagagccaagctgtca
ggggtctttcccagcactgcctcctactaatggtgcctcctactaatggt
aggattcctcggcaactcagtttccacactagttaaacgatgatgatatg
catttgtctcgcagggttgcttcaggcttggaagaattcatcacactggt
acccagagtaacttcaggtaaaatgaaggcgcaccaaaatcagaggtaag
aggagggatcctgaatctcaggccagagcggccgtgcagtgggaagcgag
gaggcacgtgactgtcctcgaagatttcattgtgatagtcacggaggctg
cttcactcttcagagacaccatgtaacttcctttcagtatctgggtgaag
ttcagcgacatcctagcgcatctggtcctcttccaggaagccttcctagg
tggataggcgtgaggcgcagccttacgctgtgggctccctgcccccactg
ccagtgccaccctttggcctcagacaaagcgggcaaccagcagcagcagc
ccgccggggctggctcagtggcttcatgaaggcaaggggctccgggggag
cccaaacccgggccggtctgcttttgaatgctatttgcaatgcaataggc
cagcctgggccttcaataacaggcccctttctttttttggacacaagcag
ccttcaacaat
gaattcagcgtggtttaggagtgtgatgcaaagcaggaacaatggggact
gaggaggctggaattctggaccctgagtctctcaagattctctcctgagc
accaggtagttagcctcccagagagcatcttccctatcactgacccactg
cctccacacactgtctcttccaacctttgcaatgacaatgtcttgtcacc
cacctcttagctccccgaccagcctctcctgacctcaacctgtccacctc
tacccacctaggcccgactccttgaggccttcactgccatcatccctacc
tacatccattgttgctcttttctattcccctccctccttctgcggtagaa
ctcaaatacaacccaatctcacctgttatttcctggacacctacaacacc
atccagtgtctgcaaagatcacctcaagactacaaataggtgctggagtt
ccaactattaaattgcacatatcagaaaatataaataaaagtaggatttg
tgatagcacttgttaaaagagacacacaaacatagacgcacacacacaca
cacactgatgaaactgaaagcaacatcttcactggagttgtggcttctct
gaaggcaagtgtttactgggaaagagacgaataaaaggatattgcagaag
accctgtagcctctgccatgagacacctgcatcacttcctgggggaggag
acgcccatcagctcctgagaatggaagcagttaccctagagaaccctcaa
ggagaggacttgtcattgagattctatctgctgttccccagtgttcaccc
acagaaacagtagatcaggctctggctgggccctggctatagcctgcctc
agtgagacctcctatcagtgctcaatcagagtctacttgacaggacctgt
taaagggactccctggatttccctggcaccctggggccaggcctttcaaa
agagaaaaaagaagagtggccagcagctctctctggcatactgacacagc
taagtgttcgtcgaatgaagccaatgtcagtgtggcatgactcagcttca
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26137696_26138742
seq2: B6Ng01-235P19.b_51_1111 (reverse)

seq1  ATTG-TGAA-GCTGC-TGTGT-CAAAAAAAG-AAGGGGCCTG-TATTGAA  44
      |||| |||| ||||| ||||| ||||||||| |||||||||| |||||||
seq2  ATTGTTGAAGGCTGCTTGTGTCCAAAAAAAGAAAGGGGCCTGTTATTGAA  50

seq1  GG-CCAGGCTGGCCTATTGCAATGCAAATAGCATTC-AAAGCAGACCGGC  92
      || |||||||||||||||||| |||||||||||||| |||||||||||||
seq2  GGCCCAGGCTGGCCTATTGCATTGCAAATAGCATTCAAAAGCAGACCGGC  100

seq1  CCGGG-TTGGGCT-CCCCGGAGCCCC-TGCC-TCATGAAAGCCACTGAGC  138
      ||||| ||||||| |||||||||||| |||| ||||| ||||||||||||
seq2  CCGGGTTTGGGCTCCCCCGGAGCCCCTTGCCTTCATG-AAGCCACTGAGC  149

seq1  CAG-CCCGGC-GGCTGCTGCTGCTGG-TGCCCGCTTTGTCTGAGGCCAAA  185
      ||| |||||| ||||||||||||||| |||||||||||||||||||||||
seq2  CAGCCCCGGCGGGCTGCTGCTGCTGGTTGCCCGCTTTGTCTGAGGCCAAA  199

seq1  GGGTGGCACTGGCAGTGGGGGCAGGGAGCCCACAGCGTAAGGCTGCGCCT  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCACTGGCAGTGGGGGCAGGGAGCCCACAGCGTAAGGCTGCGCCT  249

seq1  CACGCCTATCCACCTAGGAAGGCTTCCTGGAAGAGGACCAGATGCGCTAG  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCTATCCACCTAGGAAGGCTTCCTGGAAGAGGACCAGATGCGCTAG  299

seq1  GATGTCGCTGAACTTCACCCAGATACTGAAAGGAAGTTACATGGTGTCTC  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCGCTGAACTTCACCCAGATACTGAAAGGAAGTTACATGGTGTCTC  349

seq1  TGAAGAGTGAAGCAGCCTCCGTGACTATCACAATGAAATCTTCGAGGACA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTGAAGCAGCCTCCGTGACTATCACAATGAAATCTTCGAGGACA  399

seq1  GTCACGTGCCTCCTCGCTTCCCACTGCACGGCCGCTCTGGCCTGAGATTC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGTGCCTCCTCGCTTCCCACTGCACGGCCGCTCTGGCCTGAGATTC  449

seq1  AGGATCCCTCCTCTTACCTCTGATTTTGGTGCGCCTTCATTTTACCTGAA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCCTCCTCTTACCTCTGATTTTGGTGCGCCTTCATTTTACCTGAA  499

seq1  GTTACTCTGGGTACCAGTGTGATGAATTCTTCCAAGCCTGAAGCAACCCT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCTGGGTACCAGTGTGATGAATTCTTCCAAGCCTGAAGCAACCCT  549

seq1  GCGAGACAAATGCATATCATCATCGTTTAACTAGTGTGGAAACTGAGTTG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGACAAATGCATATCATCATCGTTTAACTAGTGTGGAAACTGAGTTG  599

seq1  CCGAGGAATCCTACCATTAGTAGGAGGCACCATTAGTAGGAGGCAGTGCT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGAATCCTACCATTAGTAGGAGGCACCATTAGTAGGAGGCAGTGCT  649

seq1  GGGAAAGACCCCTGACAGCTTGGCTCTGGAAGTTTCCTGTGCTCCAATGC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGACCCCTGACAGCTTGGCTCTGGAAGTTTCCTGTGCTCCAATGC  699

seq1  ACTGCCCATGCGCTGCTGCCAAGTCCGTCTCATAATGGAACTTAGGTCCA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCATGCGCTGCTGCCAAGTCCGTCTCATAATGGAACTTAGGTCCA  749

seq1  ACGAACCACAGAAGTTAGAGCAAGACCAGAATCCAGTAAACTGGCTGCCT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACCACAGAAGTTAGAGCAAGACCAGAATCCAGTAAACTGGCTGCCT  799

seq1  GGCTGGCACATACCTCTTCAGCCAATGATAAGCCCGCTGTCGATTAGCTC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCACATACCTCTTCAGCCAATGATAAGCCCGCTGTCGATTAGCTC  849

seq1  AGGGACTCTCAGTGCTCCTCTGGAGTAGCCTGCCTCAGGAGCGGGAAGCC  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTCTCAGTGCTCCTCTGGAGTAGCCTGCCTCAGGAGCGGGAAGCC  899

seq1  TTAGGCCTCGCGGGTCCTCCACACAGAGATGAGGAACCAGGGCCTGCGTC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCCTCGCGGGTCCTCCACACAGAGATGAGGAACCAGGGCCTGCGTC  949

seq1  GAGAATTCGGAAGCAGCCTACAGCTGTGACAGGGCTGATTATGGCCATCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCGGAAGCAGCCTACAGCTGTGACAGGGCTGATTATGGCCATCT  999

seq1  ATAGGGACGTCACAGGATGGGGCTGAGGCAGTGTGGAGGTCAGACGATTG  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGACGTCACAGGATGGGGCTGAGGCAGTGTGGAGGTCAGACGATTG  1049

seq1  TCAGCTGAATTC  1047
      ||||||||||||
seq2  TCAGCTGAATTC  1061

seq1: chr14_25990393_25991456
seq2: B6Ng01-235P19.g_66_1117

seq1  GAATTCAGCGTGGTTTAGGAGTGTGATGCAAAGCAGGAACAATGGGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCGTGGTTTAGGAGTGTGATGCAAAGCAGGAACAATGGGGACT  50

seq1  GAGGAGGCTGGAATTCTGGACCCTGAGTCTCTCAAGATTCTCTCCTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGCTGGAATTCTGGACCCTGAGTCTCTCAAGATTCTCTCCTGAGC  100

seq1  ACCAGGTAGTTAGCCTCCCAGAGAGCATCTTCCCTATCACTGACCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTAGTTAGCCTCCCAGAGAGCATCTTCCCTATCACTGACCCACTG  150

seq1  CCTCCACACACTGTCTCTTCCAACCTTTGCAATGACAATGTCTTGTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACACACTGTCTCTTCCAACCTTTGCAATGACAATGTCTTGTCACC  200

seq1  CACCTCTTAGCTCCCCGACCAGCCTCTCCTGACCTCAACCTGTCCACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTTAGCTCCCCGACCAGCCTCTCCTGACCTCAACCTGTCCACCTC  250

seq1  TACCCACCTAGGCCCGACTCCTTGAGGCCTTCACTGCCATCATCCCTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCTAGGCCCGACTCCTTGAGGCCTTCACTGCCATCATCCCTACC  300

seq1  TACATCCATTGTTGCTCTTTTCTATTCCCCTCCCTCCTTCTGCGGTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCATTGTTGCTCTTTTCTATTCCCCTCCCTCCTTCTGCGGTAGAA  350

seq1  CTCAAATACAACCCAATCTCACCTGTTATTTCCTGGACACCTACAACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATACAACCCAATCTCACCTGTTATTTCCTGGACACCTACAACACC  400

seq1  ATCCAGTGTCTGCAAAGATCACCTCAAGACTACAAATAGGTGCTGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGTCTGCAAAGATCACCTCAAGACTACAAATAGGTGCTGGAGTT  450

seq1  CCAACTATTAAATTGCACATATCAGAAAATATAAATAAAAGTAGGATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTATTAAATTGCACATATCAGAAAATATAAATAAAAGTAGGATTTG  500

seq1  TGATAGCACTTGTTAAAAGAGACACACAAACATAGACGCACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCACTTGTTAAAAGAGACACACAAACATAGACGCACACACACACA  550

seq1  CACACTGATGAAACTGAAAGCAACATCTTCACTGGAGTTGTGGCTTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATGAAACTGAAAGCAACATCTTCACTGGAGTTGTGGCTTCTCT  600

seq1  GAAGGCAAGTGTTTACTGGGAAAGAGACGAATAAAAGGATATTGCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAAGTGTTTACTGGGAAAGAGACGAATAAAAGGATATTGCAGAAG  650

seq1  ACCCTGTAGCCTCTGCCATGAGACACCTGCATCACTTCCTGGGGGAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTAGCCTCTGCCATGAGACACCTGCATCACTTCCTGGGGGAGGAG  700

seq1  ACGCCCATCAGCTCCTGAGAATGGAAGCAGTTACCCTAGAGAACCCTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCATCAGCTCCTGAGAATGGAAGCAGTTACCCTAGAGAACCCTCAA  750

seq1  GGAGAGGACTTGTCATTGAGATTCTATCTGCTGTTCCCCAGTGTTCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGACTTGTCATTGAGATTCTATCTGCTGTTCCCCAGTGTTCACCC  800

seq1  ACAGAAACAGTAGATCAGGCTCTGGCTGGGCCCTGGCTATAGCCTGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACAGTAGATCAGGCTCTGGCTGGGCCCTGGCTATAGCCTGCCTC  850

seq1  AGTGAGACCTCCTATCAGTGCTCAATCAGAGTCTACTTGACAGGACCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACCTCCTATCAGTGCTCAATCAGAGTCTACTTGACAGGACCTGT  900

seq1  TAAAGGGACTCCCTGGGATTTCCCTGGCACCCTGGGGCCAGGCCTTTCAA  950
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  TAAAGGGACTCCCT-GGATTTCCCTGGCACCCTGGGGCCAGGCCTTTC-A  948

seq1  AAAGAGAAAAAAGAAGAGTGGCCAGCAGCTCTCTCCTGGCAATACTGACC  1000
      |||||||||||||||||||||||||||||||||| ||||| ||||||| |
seq2  AAAGAGAAAAAAGAAGAGTGGCCAGCAGCTCTCT-CTGGC-ATACTGA-C  995

seq1  ACAGCTAAGTGGTTCGTCGGAATGAAAGCCAATGTCAGTGTGGGCATGAA  1050
      |||||||||| ||||||| ||||| |||||||||||||||| |||||| |
seq2  ACAGCTAAGT-GTTCGTC-GAATG-AAGCCAATGTCAGTGT-GGCATG-A  1040

seq1  CTCCAGGCTTCACA  1064
      |||   ||||||||
seq2  CTC--AGCTTCACA  1052