BAC Information

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BAC

Clone NameB6Ng01-236I14
Chromosome14 (Build37)
Map Location 89,925,092 - 90,054,057
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236I14.bB6Ng01-236I14.g
ACCGA047730GA047731
length1,131951
definitionB6Ng01-236I14.b B6Ng01-236I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,052,936 - 90,054,057)(89,925,092 - 89,925,646)
sequence
gaattcaatgtgaattgattgctttctcttttatgaaattcagtttctca
ggtcctaagagaatatttcatatttgtttctaggaaaagaagctttaaaa
gccaatattcatctactttgatcatcttcaatagcgtgagataatagtta
aacatatattaaaagataatatttgagttgagaattccttggaaatatat
aacagtttaatttcaagattatattaatttatctcatttcaactctttag
tatatatcctacacatataagatacatgcatcataattaatgataattgt
aacccaaaaatcatagctgaggtatagaaaaaagttctaatttttacaga
atttaaatatgtaagaagtaagtctttatgaaaaaaaagaaaatttgttt
ctgttattatagtctaaaccacaatgttatctcaaaaacagatcttttaa
aaagtcatgaatatgggaaggttaattagggggagaatggaggaaataaa
aatgacagggaaattatggagtgtagaaaattataataaccaaaatgcac
tttcaatctattccccttacaatgtgtatgagggagcttcattgaaaatc
tttcattaaagggagatgcaggtggaaaagagcaccaaacaacagtatca
taaaaatctttcattaatggaccatctggccattcgttaataaattgcaa
agaaatggaatcggttgttttcactgaacatgtgctttacaaaacaagga
cattcacatcaagtaatttaaaaaaatggtataatgggaatcaaaaatac
aacaataataaaaatggccaaagcctttaccacacatttcacaaaataaa
aacatatatggccttttagtacctaagaagaaatcgatcagtacttatca
gtaaagaaatcagcattttaggtatgtgctggtatgataggtatgtgctg
atatgttaggtatgtgctgataatgttaagggaggattctttccagaatg
aaaatgaattctatattatttggcatcctggttctgtgacaatgaaattg
taacaagaaaagggacatctctggatttctatgagactgatatttctact
ggaatatatatcgggttgaactctctaaggc

gaattcactgtcgataactaaggggtggtcagagggtgatccagtcatgg
tatttattgttgtggtcaagtaattgccacagaatccactcaaattatgt
tctcaagaaagaacagtttattgaacatatacctcagcactgattgatca
atgatagagcatagaattgggagctaagactgtggcccagaatgtttcta
gggcaagtttataaagccaaaacccacattgagcacatataaggtacaca
aagggctacagaatggtcagctcttattcgaacaattttcacagtttagg
cataacagttccaactgacctttaatttggttggtcctaagcagaaccta
tggatcccgaatttattaagaataacaaacctctgggataacactgaaga
atcagagacctggaaggtgagagactctcagcactcaaggggagggactt
tagatgcaatgccttagagtggagagatggaacttgtagagcctacctcg
agcagaaagacagggcatcaagtgagggatggggttgccatctacggtca
aaactcttacccattattgttctaatctgaaagaatttatagagatagaa
atggaatggagcatgaggaaaagaaggtttagcaaaaggcccaaactggg
gtccagttcaaaggaaggtctcaaggcctgacactattattgatgctatg
gagggctcaaaaaagggacctattatggcagcactccagaagacccaaca
agcagctgaaagagtcagatgcagatatttacacccaacaaatgggcaga
agctgctgacctctgtggttgaattagggaaaaactggaagaagctgagg
aggagggtaactctgtaggaggaccagcagtctcaattaatctggacctg
caaggtctttcagacactggaccaccaaccaggcagcatacacccagatg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90052936_90054057
seq2: B6Ng01-236I14.b_45_1175 (reverse)

seq1  GCCTTAG-GAGTTCA--CCGATATATATT-CAGTAGAAATATCAGTCTCC  46
      ||||||| |||||||  |||||||||||| ||||||||||||||||||| 
seq2  GCCTTAGAGAGTTCAACCCGATATATATTCCAGTAGAAATATCAGTCTCA  50

seq1  TAGAAATTCAGAGATTTTCCTTTTCTTGTTAC-ATTTCATTGTCACAGAA  95
      ||||||| ||||||| | |||||||||||||| |||||||||||||||||
seq2  TAGAAATCCAGAGATGTCCCTTTTCTTGTTACAATTTCATTGTCACAGAA  100

seq1  -CAGGGTGCCAAAT-ATATAGATTTCATTTTCATTCTTGGAAGAATCCTC  143
       |||| |||||||| ||||||| |||||||||||||| | ||||||||||
seq2  CCAGGATGCCAAATAATATAGAATTCATTTTCATTCTGGAAAGAATCCTC  150

seq1  CC-TAACA-TATCAGCACATACCTAACATATCAGCACATACCTATCATAC  191
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACATTATCAGCACATACCTAACATATCAGCACATACCTATCATAC  200

seq1  CAGCACATACCTAAAATGCTGATTTCTTTACTGATAAGTACTGATCGATT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATACCTAAAATGCTGATTTCTTTACTGATAAGTACTGATCGATT  250

seq1  TCTTCTTAGGTACTAAAAGGCCATATATGTTTTTATTTTGTGAAATGTGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTAGGTACTAAAAGGCCATATATGTTTTTATTTTGTGAAATGTGT  300

seq1  GGTAAAGGCTTTGGCCATTTTTATTATTGTTGTATTTTTGATTCCCATTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGGCTTTGGCCATTTTTATTATTGTTGTATTTTTGATTCCCATTA  350

seq1  TACCATTTTTTTAAATTACTTGATGTGAATGTCCTTGTTTTGTAAAGCAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTTTTTAAATTACTTGATGTGAATGTCCTTGTTTTGTAAAGCAC  400

seq1  ATGTTCAGTGAAAACAACCGATTCCATTTCTTTGCAATTTATTAACGAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGTGAAAACAACCGATTCCATTTCTTTGCAATTTATTAACGAAT  450

seq1  GGCCAGATGGTCCATTAATGAAAGATTTTTATGATACTGTTGTTTGGTGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGATGGTCCATTAATGAAAGATTTTTATGATACTGTTGTTTGGTGC  500

seq1  TCTTTTCCACCTGCATCTCCCTTTAATGAAAGATTTTCAATGAAGCTCCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCACCTGCATCTCCCTTTAATGAAAGATTTTCAATGAAGCTCCC  550

seq1  TCATACACATTGTAAGGGGAATAGATTGAAAGTGCATTTTGGTTATTATA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACACATTGTAAGGGGAATAGATTGAAAGTGCATTTTGGTTATTATA  600

seq1  ATTTTCTACACTCCATAATTTCCCTGTCATTTTTATTTCCTCCATTCTCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTACACTCCATAATTTCCCTGTCATTTTTATTTCCTCCATTCTCC  650

seq1  CCCTAATTAACCTTCCCATATTCATGACTTTTTAAAAGATCTGTTTTTGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATTAACCTTCCCATATTCATGACTTTTTAAAAGATCTGTTTTTGA  700

seq1  GATAACATTGTGGTTTAGACTATAATAACAGAAACAAATTTTCTTTTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATTGTGGTTTAGACTATAATAACAGAAACAAATTTTCTTTTTTT  750

seq1  TCATAAAGACTTACTTCTTACATATTTAAATTCTGTAAAAATTAGAACTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAGACTTACTTCTTACATATTTAAATTCTGTAAAAATTAGAACTT  800

seq1  TTTTCTATACCTCAGCTATGATTTTTGGGTTACAATTATCATTAATTATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATACCTCAGCTATGATTTTTGGGTTACAATTATCATTAATTATG  850

seq1  ATGCATGTATCTTATATGTGTAGGATATATACTAAAGAGTTGAAATGAGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTATCTTATATGTGTAGGATATATACTAAAGAGTTGAAATGAGA  900

seq1  TAAATTAATATAATCTTGAAATTAAACTGTTATATATTTCCAAGGAATTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATATAATCTTGAAATTAAACTGTTATATATTTCCAAGGAATTC  950

seq1  TCAACTCAAATATTATCTTTTAATATATGTTTAACTATTATCTCACGCTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCAAATATTATCTTTTAATATATGTTTAACTATTATCTCACGCTA  1000

seq1  TTGAAGATGATCAAAGTAGATGAATATTGGCTTTTAAAGCTTCTTTTCCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATGATCAAAGTAGATGAATATTGGCTTTTAAAGCTTCTTTTCCT  1050

seq1  AGAAACAAATATGAAATATTCTCTTAGGACCTGAGAAACTGAATTTCATA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAATATGAAATATTCTCTTAGGACCTGAGAAACTGAATTTCATA  1100

seq1  AAAGAGAAAGCAATCAATTCACATTGAATTC  1122
      |||||||||||||||||||||||||||||||
seq2  AAAGAGAAAGCAATCAATTCACATTGAATTC  1131


seq1: chr14_89925092_89925646
seq2: B6Ng01-236I14.g_67_621

seq1  GAATTCACTGTCGATAACTAAGGGGTGGTCAGAGGGTGATCCAGTCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCGATAACTAAGGGGTGGTCAGAGGGTGATCCAGTCATGG  50

seq1  TATTTATTGTTGTGGTCAAGTAATTGCCACAGAATCCACTCAAATTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGTTGTGGTCAAGTAATTGCCACAGAATCCACTCAAATTATGT  100

seq1  TCTCAAGAAAGAACAGTTTATTGAACATATACCTCAGCACTGATTGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGAAAGAACAGTTTATTGAACATATACCTCAGCACTGATTGATCA  150

seq1  ATGATAGAGCATAGAATTGGGAGCTAAGACTGTGGCCCAGAATGTTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGAGCATAGAATTGGGAGCTAAGACTGTGGCCCAGAATGTTTCTA  200

seq1  GGGCAAGTTTATAAAGCCAAAACCCACATTGAGCACATATAAGGTACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGTTTATAAAGCCAAAACCCACATTGAGCACATATAAGGTACACA  250

seq1  AAGGGCTACAGAATGGTCAGCTCTTATTCGAACAATTTTCACAGTTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTACAGAATGGTCAGCTCTTATTCGAACAATTTTCACAGTTTAGG  300

seq1  CATAACAGTTCCAACTGACCTTTAATTTGGTTGGTCCTAAGCAGAACCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAGTTCCAACTGACCTTTAATTTGGTTGGTCCTAAGCAGAACCTA  350

seq1  TGGATCCCGAATTTATTAAGAATAACAAACCTCTGGGATAACACTGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCCGAATTTATTAAGAATAACAAACCTCTGGGATAACACTGAAGA  400

seq1  ATCAGAGACCTGGAAGGTGAGAGACTCTCAGCACTCAAGGGGAGGGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGACCTGGAAGGTGAGAGACTCTCAGCACTCAAGGGGAGGGACTT  450

seq1  TAGATGCAATGCCTTAGAGTGGAGAGATGGAACTTGTAGAGCCTACCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAATGCCTTAGAGTGGAGAGATGGAACTTGTAGAGCCTACCTCG  500

seq1  AGCAGAAAGACAGGGCATCAAGTGAGGGATGGGGTTGCCATCTACGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGACAGGGCATCAAGTGAGGGATGGGGTTGCCATCTACGGTCA  550

seq1  AAACT  555
      |||||
seq2  AAACT  555


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