BAC Information

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BAC

Clone NameB6Ng01-236L02
Chromosome14 (Build37)17 (Build37)
Map Location 86,101,840 - 86,102,99430,747,847 - 30,748,532
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236L02.bB6Ng01-236L02.g
ACCGA047850GA047851
length1,151747
definitionB6Ng01-236L02.b B6Ng01-236L02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,101,840 - 86,102,994)(30,747,847 - 30,748,532)
sequence
gaattcaccatatatggtgaagcttggcagggtcacaatatatctacatt
tccaataacttgaaaactatggaaacaaaggataagaaaattgaaatgga
ggacgtgtacagagcaaagaacctggggagcataaaggtagagacagaaa
ggacagaatttaagcacaatatgtttaagtcctgtgttacccccctgcac
aggatacaaatacaggcataaaaaccattctaaagggaatcaaaaggagg
cgaagaaagaatagtttgtgtgagaacagcagaagctgagataataaata
agggagccaagagacaacttgtagaatccaagagcaagatgatcactgac
tccttggagagtctgaagataaccacttctggtgaagctctgacttctac
tcagtgagacaatttaaatttctgactttcaatataatgagaaagtaaac
ttatgttcctataagcgttgtgtgttatgattggttataggagcagtagg
aaaggaacgcagctccttaagcaaggccagtgaaagctgataggccaagg
ccacaaaaaataggaatactaagccctcaggtcaagctgagtaaatgaaa
tggcttccttactagccatagaaaatgcctgccaaggatgtggaagtgtg
agtgagataggaaactgaaattgcctggctagttcatcggcaaatgaaca
acttgaaaatgtattttttcacttgttcaaatattcattaattcaaaatc
atgtatttattgtagatgaaggttaaagatttgagtcattaatctttcaa
tttatgtggtaaattactttgtatggagctgagcaataaatatgtggatg
attaatatgttctttctcatattgatattgagcattgatgtttagaactt
agtttcaattgatatatcttaatttaaaattattcatcttatgcaaaata
tgtcttcactatataagttataacatagatcacactgtctcattattttc
cattatttcttcttggtggtatttttaataccattcatttctttctggaa
tatgggcagagctataccagttaggcatgtactattctgatatatactag
agtcaaaaatttatattttaggagtagttacattaccccatagccttaat
c
gaattctttattccttgtttcttttgggggggtgtggtttaaggctgatg
ttgtttgaaattacttaggtccctgcttgttctttgccttaagggcaaac
aagagtcagacatactgtaattgccaaagcttttgactagcaccaggtgt
gtacttagggacactcttaatcactacaaaattaaggcaggaaggaaagg
ccgaatacaggcacactcacacacacttctccccattccttctatttacc
catacataaccttagtatgcatttaattttttaacattgtgtgtgtgtgt
gtgcatgcgtgtgtacgtcagtgaacaactttctctccatatttgtgggt
attgggaaattcaggtctttgccttggcagctgaaccatatcgttgatct
cctagatattttatacactataaattggttcattccatgtgaattggttt
cctacattactgaaaatttgttcatccatccttccctcccccccactctc
tctctctctctctctctctctctctctaacacacacacacacacacacac
acacacacacacacacattttcttgtttagacagggtctcactatataga
tttgcctgtactggaacttgctgtagtgacaaggctggcattatacttat
aaacatccatttgcctgtttcccgagtggagagataaaataataaaactc
ttgctggggtatgtgcaattttctacaaaacacactcagattctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86101840_86102994
seq2: B6Ng01-236L02.b_43_1193

seq1  GAATTCACCATATATGGTGAAGCTTGGCAGGGTCACAATATATCTACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATATATGGTGAAGCTTGGCAGGGTCACAATATATCTACATT  50

seq1  TCCAATAACTTGAAAACTAAGGAAACAAAGGATAAGAAAATTGAAATGGA  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCCAATAACTTGAAAACTATGGAAACAAAGGATAAGAAAATTGAAATGGA  100

seq1  GGACGTGTACAGAGCAAAGAACCTGGGGAGCATAAAGGTAGAGACAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTGTACAGAGCAAAGAACCTGGGGAGCATAAAGGTAGAGACAGAAA  150

seq1  GGACAGAATTTAAGCACAATATGTTTAAGTCCTGTGTTACCCCCCTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAATTTAAGCACAATATGTTTAAGTCCTGTGTTACCCCCCTGCAC  200

seq1  AGGATACAAATACAGGCATAAAAACCATTCTAAAGGGAATCAAAAGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACAAATACAGGCATAAAAACCATTCTAAAGGGAATCAAAAGGAGG  250

seq1  CAAAGAAGGAATAGTTTGTGTGAGAACAGCAGAAGCTGAGATAATAAATA  300
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAAAGAATAGTTTGTGTGAGAACAGCAGAAGCTGAGATAATAAATA  300

seq1  AGGGAGCCAAGAGACAACTTGTAGAATCCAAGAGCAAGATGATCACTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCCAAGAGACAACTTGTAGAATCCAAGAGCAAGATGATCACTGAC  350

seq1  TCCTTGGAGAGTCTGAAGATAACCACTTCTGGTGAAGCTCTGACTTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGAGAGTCTGAAGATAACCACTTCTGGTGAAGCTCTGACTTCTAC  400

seq1  TCAGTGAGACAATTTAAATTTCTGACTTTCAATATAATGAGAAAGTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGACAATTTAAATTTCTGACTTTCAATATAATGAGAAAGTAAAC  450

seq1  TTATGTTCCTATAAGCGTTGTGTGTTATGATTGGTTATAGGAGCAGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTCCTATAAGCGTTGTGTGTTATGATTGGTTATAGGAGCAGTAGG  500

seq1  AAAGGAACGCAGCTCCTTAAGCAAGGCCAGTGAAAGCTGATAGGCCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACGCAGCTCCTTAAGCAAGGCCAGTGAAAGCTGATAGGCCAAGG  550

seq1  CCACAGAAAATAGGAATACTAAGCCCTCAGGTCAAGCTGAGTAAATGAAA  600
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAAATAGGAATACTAAGCCCTCAGGTCAAGCTGAGTAAATGAAA  600

seq1  TGGCTTCCTTACTAGCCATAGAAAATGCCTGCCAAGGATGTGGAAGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCTTACTAGCCATAGAAAATGCCTGCCAAGGATGTGGAAGTGTG  650

seq1  AGTGAGATAGGAAACTGAAATTGCCTGGCTAGTTCATCGGCAAATGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATAGGAAACTGAAATTGCCTGGCTAGTTCATCGGCAAATGAACA  700

seq1  ACTTGAAAATGTATTTTTTCACTTGTTCAAATATTCATTAGTTCAAAATC  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACTTGAAAATGTATTTTTTCACTTGTTCAAATATTCATTAATTCAAAATC  750

seq1  ATGTATTTATTGTAGATGAAGGTTAAAGATTTGAGTCATTAATCTTTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTATTGTAGATGAAGGTTAAAGATTTGAGTCATTAATCTTTCAA  800

seq1  TTTATGTGGTAAATTACTTTGTATGGGGCTGAGCAATAAATATGTGGATG  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTATGTGGTAAATTACTTTGTATGGAGCTGAGCAATAAATATGTGGATG  850

seq1  ATTAATATGTTCTTTCTCATATTGATATTGAGCATTGATGTTTAGAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATGTTCTTTCTCATATTGATATTGAGCATTGATGTTTAGAACTT  900

seq1  AGTTTCAATTGATTATATCTTAATTTAAAATTATTCATCTTATGCAAAAT  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAATTGA-TATATCTTAATTTAAAATTATTCATCTTATGCAAAAT  949

seq1  ATGTCTTCACTATATAAGTTATAACATAGATCACACTGTCTCATTATTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCACTATATAAGTTATAACATAGATCACACTGTCTCATTATTTT  999

seq1  CCATTATTTCTTCTTGGTGGTATTTTAATAACCATTCATTTCTTTCTG--  1048
      |||||||||||||||||||||||||| |  ||||||||||||||||||  
seq2  CCATTATTTCTTCTTGGTGGTATTTTTAATACCATTCATTTCTTTCTGGA  1049

seq1  ATAT-GGCAGAGCTAAGGACAAG-TAAGCATGTAACTATTCTGATATATA  1096
      |||| ||||||||||   || || || |||||| ||||||||||||||||
seq2  ATATGGGCAGAGCTA--TACCAGTTAGGCATGT-ACTATTCTGATATATA  1096

seq1  CTTAAAGAATTCAAAAATTTATATTTTAAGGAGTAGTTACAATTACACAT  1146
      ||   || | ||||||||||||||||| ||||||||||||| |  | |||
seq2  CT---AG-AGTCAAAAATTTATATTTT-AGGAGTAGTTACATTACCCCAT  1141

seq1  AGCC-TAATC  1155
      |||| |||||
seq2  AGCCTTAATC  1151

seq1: chr17_30747847_30748532
seq2: B6Ng01-236L02.g_125_809 (reverse)

seq1  CCCAGAATCCGGGTGTGCTTTGTAGAAAATAGCACATAGCCCAGCAAGAG  50
      ||||||||| | ||||| |||||||||||| ||||||| |||||||||||
seq2  CCCAGAATCTGAGTGTGTTTTGTAGAAAATTGCACATACCCCAGCAAGAG  50

seq1  TTTTAATCTTTTAATCTCAGCACTTGGGAAACAGGCAGATGGATCTCTGT  100
      ||||| | |||| |||||  |||| |||||||||||| |||||| | | |
seq2  TTTTATTATTTT-ATCTCTCCACTCGGGAAACAGGCAAATGGATGTTTAT  99

seq1  AAGTTTGAGGCCAGCCTGGTCTATACAGCAAGTTCCAGTACAGGCAAAGC  150
      |||| | | |||||||| |||  ||||||||||||||||||||||||| |
seq2  AAGTATAATGCCAGCCTTGTCACTACAGCAAGTTCCAGTACAGGCAAATC  149

seq1  TACATAGTGAGACCCTGTCTAAACAAGAAAATGTGTGTGTGTGTGTGTGT  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTGAGACCCTGTCTAAACAAGAAAATGTGTGTGTGTGTGTGTGT  199

seq1  GTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  249

seq1  GAGTGGGGGGGAGGGAAGGATGGATGAACAAATTTTCAGTAATGTAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGGGGGAGGGAAGGATGGATGAACAAATTTTCAGTAATGTAGGAA  299

seq1  ACCAATTCACATGGAATGAACCAATTTATAGTGTATAAAATATCTAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTCACATGGAATGAACCAATTTATAGTGTATAAAATATCTAGGAG  349

seq1  ATCAACGATATGGTTCAGCTGCCAAGGCAAAGACCTGAATTTCCCAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACGATATGGTTCAGCTGCCAAGGCAAAGACCTGAATTTCCCAATAC  399

seq1  CCACAAATATGGAGAGAAAGTTGTTCACTGACGTACACACGCATGCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATATGGAGAGAAAGTTGTTCACTGACGTACACACGCATGCACAC  449

seq1  ACACACACACAATGTTAAAAAATTAAATGCATACTAAGGTTATGTATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACAATGTTAAAAAATTAAATGCATACTAAGGTTATGTATGGG  499

seq1  TAAATAGAAGGAATGGGGAGAAGTGTGTGTGAGTGTGCCTGTATTCGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGAAGGAATGGGGAGAAGTGTGTGTGAGTGTGCCTGTATTCGGCC  549

seq1  TTTCCTTCCTGCCTTAATTTTGTAGTGACTAAGAGTGTCCCTAAGTACAC  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTCCTTCCTGCCTTAATTTTGTAGTGATTAAGAGTGTCCCTAAGTACAC  599

seq1  ACCTGGTGCTAGTCAAAAGCTTTGGCAATTACAGTATGTCTGACTCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTGCTAGTCAAAAGCTTTGGCAATTACAGTATGTCTGACTCTTGT  649

seq1  TTGCCCTTAAGGCAAAGAACAAGCAGGGACCAAAGT  686
      ||||||||||||||||||||||||||||||| ||||
seq2  TTGCCCTTAAGGCAAAGAACAAGCAGGGACCTAAGT  685