BAC Information

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BAC

Clone NameB6Ng01-237B09
Chromosome14 (Build37)
Map Location 59,181,140 - 59,302,751
singlet/doubletdoublet
Overlap genenone
Upstream geneN6amt2, Xpo4, Lats2, Sap18, F630043A04Rik, Mrp63, Zdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237B09.bB6Ng01-237B09.g
ACCGA048141GA048142
length1,143297
definitionB6Ng01-237B09.b B6Ng01-237B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,301,584 - 59,302,751)(59,181,140 - 59,181,436)
sequence
gaattcagtgatcagagggagagacaagagtggagtagaaagaaggccta
gagataagcagtttttaagaatgagaatagatagtgctagagacaggaat
ttgtggataatttgtttctgtggttgaagaagatgttataatccatgaga
atttacaaatcaagttttttggtttttttttgccactgaaattgattatc
tcatttgtattgtggccaagcctttggaagaaagataacacacttaaata
gaatccatgagtctgagaagaaaagagattagagaaggcaggcgaggagt
cactgagtctaattctgaatgaaagatccatagttagagacaaagtaggt
aggaaagaagacatagagattttccaggatcagagcaaggaggaggtgga
agagattttagaaaaggagtcaaaaataggaagctcacaggagggaggat
tccaatagcacaggaatagagacacaaagagagagaaggttatgtgccat
ggtgacagaatctcattctgaaccaatcagagagagatgtccttaatcac
aatggagaggcattttggagttgaatccagtgcatggcaagatccagcag
aagcaaatgacccacactcacgaggttcaagatcagcattttggttcagt
taggacgggtttgaccctttggaaggggcccattgttctcctcaatgttc
tctccaccaatgtaagcttgaatacagtaaaaatagcaaactggaccact
tcatgggtagaagaaatggttattgaagtatcaaactgccaaagctatcc
aggaagaggggtagagagaatatcaaaatgacagagaaacaagtggattt
tataggacagtcagcagggtagggtctttgacttgatacagactctttgg
gttgacacagatctagatgctcttggtcaaggtagcttacttttgggatg
aatcaatggaaattccaggtaggttaagggagactctggtaacggaactg
cttttaagcatctgttaccagtacaatcttctgtttacaggcaaagcctt
ctgttagacattgtcacagcatgcattggggccacttgagcctaatataa
catgttcagtaacttagctgaaggcatgcagtcaatttaaaaa
agatgtttcagtccacagttaattggacttctccatcaccttctgattgg
tttaataagagctgaatggcctatagcaaggcaagagaaaataggtggga
cttccaggagagttaggaactctgggaaggagtcaagggtggtagattga
gacagtcccgttcaaaggagaaaaaaaagcaactctagaaaagcatgggg
gaaatgtcacagtgaatgtgatactgttacaggacacactgagctcagct
gtactttagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59301584_59302751
seq2: B6Ng01-237B09.b_50_1192 (reverse)

seq1  TTTTAAAATTGACTGCATGCCTTCAGCCAAAAGTTTACTGAACCATTGTT  50
      |||| |||||||||||||||||||||| ||    |||||||||   ||||
seq2  TTTTTAAATTGACTGCATGCCTTCAGCTAA---GTTACTGAAC--ATGTT  45

seq1  ATATTAGGCTCAAAGTGGGCCCCCAAATTGCAATGCTGGTGACAATGTCC  100
      ||||||||||| ||||||  ||||||  ||| ||||| ||||||||||| 
seq2  ATATTAGGCTC-AAGTGG--CCCCAA--TGC-ATGCT-GTGACAATGTC-  87

seq1  TAAACAGAAGGGCTTTGGCCTGGTAAACAGAAGGATTGTAACTGGGTAAA  150
        ||||||| |||||| |||| |||||||||| |||||| |||||   ||
seq2  -TAACAGAA-GGCTTT-GCCT-GTAAACAGAA-GATTGT-ACTGG--TAA  129

seq1  CAGATGCTTAAAAGCAGGTTTCCGTTTACCAGGAGTCTCCCTTAACCTAC  200
      |||||||||||||||||  ||||| |||||| ||||||||||||||||||
seq2  CAGATGCTTAAAAGCAG--TTCCG-TTACCA-GAGTCTCCCTTAACCTAC  175

seq1  CTGGAATTTCCATTGATTCATCCCAAAAGTAAGCTACCTTGACCAAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTTCCATTGATTCATCCCAAAAGTAAGCTACCTTGACCAAGAGC  225

seq1  ATCTAGATCTGTGTCAACCCAAAGAGTCTGTATCAAGTCAAAGACCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGATCTGTGTCAACCCAAAGAGTCTGTATCAAGTCAAAGACCCTAC  275

seq1  CCTGCTGACTGTCCTATAAAATCCACTTGTTTCTCTGTCATTTTGATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGACTGTCCTATAAAATCCACTTGTTTCTCTGTCATTTTGATATT  325

seq1  CTCTCTACCCCTCTTCCTGGATAGCTTTGGCAGTTTGATACTTCAATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTACCCCTCTTCCTGGATAGCTTTGGCAGTTTGATACTTCAATAAC  375

seq1  CATTTCTTCTACCCATGAAGTGGTCCAGTTTGCTATTTTTACTGTATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCTACCCATGAAGTGGTCCAGTTTGCTATTTTTACTGTATTCA  425

seq1  AGCTTACATTGGTGGAGAGAACATTGAGGAGAACAATGGGCCCCTTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACATTGGTGGAGAGAACATTGAGGAGAACAATGGGCCCCTTCCAA  475

seq1  AGGGTCAAACCCGTCCTAACTGAACCAAAATGCTGATCTTGAACCTCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAAACCCGTCCTAACTGAACCAAAATGCTGATCTTGAACCTCGTG  525

seq1  AGTGTGGGTCATTTGCTTCTGCTGGATCTTGCCATGCACTGGATTCAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGTCATTTGCTTCTGCTGGATCTTGCCATGCACTGGATTCAACT  575

seq1  CCAAAATGCCTCTCCATTGTGATTAAGGACATCTCTCTCTGATTGGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGCCTCTCCATTGTGATTAAGGACATCTCTCTCTGATTGGTTCA  625

seq1  GAATGAGATTCTGTCACCATGGCACATAACCTTCTCTCTCTTTGTGTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGATTCTGTCACCATGGCACATAACCTTCTCTCTCTTTGTGTCTC  675

seq1  TATTCCTGTGCTATTGGAATCCTCCCTCCTGTGAGCTTCCTATTTTTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGTGCTATTGGAATCCTCCCTCCTGTGAGCTTCCTATTTTTGAC  725

seq1  TCCTTTTCTAAAATCTCTTCCACCTCCTCCTTGCTCTGATCCTGGAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTAAAATCTCTTCCACCTCCTCCTTGCTCTGATCCTGGAAAAT  775

seq1  CTCTATGTCTTCTTTCCTACCTACTTTGTCTCTAACTATGGATCTTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTCTTCTTTCCTACCTACTTTGTCTCTAACTATGGATCTTTCAT  825

seq1  TCAGAATTAGACTCAGTGACTCCTCGCCTGCCTTCTCTAATCTCTTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTAGACTCAGTGACTCCTCGCCTGCCTTCTCTAATCTCTTTTCT  875

seq1  TCTCAGACTCATGGATTCTATTTAAGTGTGTTATCTTTCTTCCAAAGGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGACTCATGGATTCTATTTAAGTGTGTTATCTTTCTTCCAAAGGCT  925

seq1  TGGCCACAATACAAATGAGATAATCAATTTCAGTGGCAAAAAAAAACCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACAATACAAATGAGATAATCAATTTCAGTGGCAAAAAAAAACCAA  975

seq1  AAAACTTGATTTGTAAATTCTCATGGATTATAACATCTTCTTCAACCACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGATTTGTAAATTCTCATGGATTATAACATCTTCTTCAACCACA  1025

seq1  GAAACAAATTATCCACAAATTCCTGTCTCTAGCACTATCTATTCTCATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAATTATCCACAAATTCCTGTCTCTAGCACTATCTATTCTCATTC  1075

seq1  TTAAAAACTGCTTATCTCTAGGCCTTCTTTCTACTCCACTCTTGTCTCTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTGCTTATCTCTAGGCCTTCTTTCTACTCCACTCTTGTCTCTC  1125

seq1  CCTCTGATCACTGAATTC  1168
      ||||||||||||||||||
seq2  CCTCTGATCACTGAATTC  1143

seq1: chr14_59181140_59181436
seq2: B6Ng01-237B09.g_74_370

seq1  AGATGTTTCAGTCCACAGTTAATTGGACTTCTCCATCACCTTCTGATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTCAGTCCACAGTTAATTGGACTTCTCCATCACCTTCTGATTGG  50

seq1  TTTAATAAGAGCTGAATGGCCTATAGCAAGGCAAGAGAAAATAGGTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAGAGCTGAATGGCCTATAGCAAGGCAAGAGAAAATAGGTGGGA  100

seq1  CTTCCAGGAGAGTTAGGAACTCTGGGAAGGAGTCAAGGGTGGTAGATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGGAGAGTTAGGAACTCTGGGAAGGAGTCAAGGGTGGTAGATTGA  150

seq1  GACAGTCCCGTTCAAAGGAGAAAAAAAAGCAACTCTAGAAAAGCATGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCCCGTTCAAAGGAGAAAAAAAAGCAACTCTAGAAAAGCATGGGG  200

seq1  GAAATGTCACAGTGAATGTGATACTGTTACAGGACACACTGAGCTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCACAGTGAATGTGATACTGTTACAGGACACACTGAGCTCAGCT  250

seq1  GTACTTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  297
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  297