BAC Information

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BAC

Clone NameB6Ng01-237M03
Chromosome14 (Build37)
Map Location 8,641,660 - 8,642,446
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976
Downstream geneFlnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik, LOC100041948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237M03.bB6Ng01-237M03.g
ACCGA048630GA048631
length1,218788
definitionB6Ng01-237M03.b B6Ng01-237M03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaaatgggacctcattaaactccagagcttctgcaaggcaaaa
gacaccgtcaataagacaaaaagaccaccaacagattgggaaaggatctt
tacctatcctaaatcagacaggggactaatatccaacatatataaagaac
tcaagaaggtggacttcagaaaatcaaatagccccattaaaaaatggggc
tcagaactgaacaaagaattctcacctgaggaatacggaatggcagagaa
gcacctgaaaaaatgttcaacatccttaatcattagggaaatgcaaatca
aaacaaccctgagattccacctcacaccagtcagaatgggtaagatcaaa
aattcaggtgacagcagatgctggcgaggatgtagagaaagaggaatact
cctccactgttggtgggattgcaagcttgtacaactactctggaaatcag
tgtggtggttcctcagaaaattggacataatactaccggaggatccagca
atacctctcctgggcatatatccagaaaatgtaccaaccggtaagaagga
cacatgctccactatggtcatagcagcattatttataatagccagaagct
ggaaagaacccagatgcccttcaacggaggaatggatacagaaaattggt
acatttacacaatggagtactactcagctattaaaaagaatgaattaatg
aaattcctagccaaatggatggacctggagggcatcatcctgagtgaggt
aacacattcacaaaggaactcacacaatatgtactcactgataagtggat
attagccccaaacctaggattcccaagatataaagtataatttgctaaac
acatgaaactcaagaagaatgaagactgaagtgtggacactatgcccctc
cttagaattgggaacaaaacacccttggaaggagttacagagacaaagtt
tggagctgagatgaaagatggaccatgtagagactgcatatccaggatcc
accccatatcagcatccaacactgacacattgcataccctagcaaattta
tcgaaagaaccagatgtagctgtctctttggtgagactatgccggcttag
ccaaacaccagatgatgctccaggtcagctaaatgatggatccagctcca
atggaggactagaagatcaggactaaggatctgcatcatagttgcacacc
atattgaaacttaaccga
gaattctcagccagacactctttacactaggacctggggcatccagcgga
cagcttggctgccatatagggaacagggcagagtcctgacaacagtactc
agagggatgagtaaggaccttcccttttttggaattgtttctcagtcttg
actaatagggcctggtctctcccacaggactaggaatttcctggtctttt
atctcatctttaagcaccacaccctcttccccttcagatcctgggtagga
gctgacagacagattgtaactgcccagctatgacctcatgttgctcacgg
atacctggcaggcagaggacacgttggtcccctcactcgtctctcaattg
cagaactgcagctgggagggagccatcccaagttggaggaatgcttgggg
tgggacagttgcttttctctggaaggctctagagcaatttacagaattcc
agaattccagcccaccctgcccggaggtcagtccggtttagatattcaag
ggagcggcctgtgcattttaatttggatcaaagtcttgaatctacagggt
gaatctgagccatttgctttctcaaagcctcagtttcttctagaaactat
tgtctctattgtctagttatctctagatccccaagggagattgtcaccca
agtcattaaatgaaactgcagggatgaagaacttggcaagcagccaacat
ttaggaaatagtaagactagtctgaaaatgtgtttgtttttaattttaaa
aattacatcatgtgcgcgagtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8641660_8642446
seq2: B6Ng01-237M03.g_67_854 (reverse)

seq1  CACACACACACACACACACTCGCGCACATGATGTAATTTTTAAAATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACTCGCGCACATGATGTAATTTTTAAAATTAAA  50

seq1  AAC-AACACATTTTCAGACTAGTCTTACTATTTCCTAAATGTTGGCTGCT  99
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACACATTTTCAGACTAGTCTTACTATTTCCTAAATGTTGGCTGCT  100

seq1  TGCCAAGTTCTTCATCCCTGCAGTTTCATTTAATGACTTGGGTGACAATC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGTTCTTCATCCCTGCAGTTTCATTTAATGACTTGGGTGACAATC  150

seq1  TCCCTTGGGGATCTAGAGATAACTAGACAATAGAGACAATAGTTTCTAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGGGGATCTAGAGATAACTAGACAATAGAGACAATAGTTTCTAGA  200

seq1  AGAAACTGAGGCTTTGAGAAAGCAAATGGCTCAGATTCACCCTGTAGATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGAGGCTTTGAGAAAGCAAATGGCTCAGATTCACCCTGTAGATT  250

seq1  CAAGACTTTGATCCAAATTAAAATGCACAGGCCGCTCCCTTGAATATCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTTGATCCAAATTAAAATGCACAGGCCGCTCCCTTGAATATCTA  300

seq1  AACCGGACTGACCTCCGGGCAGGGTGGGCTGGAATTCTGGAATTCTGTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGACTGACCTCCGGGCAGGGTGGGCTGGAATTCTGGAATTCTGTAA  350

seq1  ATTGCTCTAGAGCCTTCCAGAGAAAAGCAACTGTCCCACCCCAAGCATTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTAGAGCCTTCCAGAGAAAAGCAACTGTCCCACCCCAAGCATTC  400

seq1  CTCCAACTTGGGATGGCTCCCTCCCAGCTGCAGTTCTGCAATTGAGAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACTTGGGATGGCTCCCTCCCAGCTGCAGTTCTGCAATTGAGAGAC  450

seq1  GAGTGAGGGGACCAACGTGTCCTCTGCCTGCCAGGTATCCGTGAGCAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGGGACCAACGTGTCCTCTGCCTGCCAGGTATCCGTGAGCAACA  500

seq1  TGAGGTCATAGCTGGGCAGTTACAATCTGTCTGTCAGCTCCTACCCAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCATAGCTGGGCAGTTACAATCTGTCTGTCAGCTCCTACCCAGGA  550

seq1  TCTGAAGGGGAAGAGGGTGTGGTGCTTAAAGATGAGATAAAAGACCAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGGGAAGAGGGTGTGGTGCTTAAAGATGAGATAAAAGACCAGGA  600

seq1  AATTCCTAGTCCTGTGGGAGAGACCAGGCCCTATTAGTCAAGACTGAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAGTCCTGTGGGAGAGACCAGGCCCTATTAGTCAAGACTGAGAA  650

seq1  ACAATTCCAAAAAAGGGAAGGTCCTTACTCATCCCTCTGAGTACTGTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCCAAAAAAGGGAAGGTCCTTACTCATCCCTCTGAGTACTGTTGT  700

seq1  CAGGACTCTGCCCTGTTCCCTATATGGCAGCCAAGCTGTCCGCTGGATGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTCTGCCCTGTTCCCTATATGGCAGCCAAGCTGTCCGCTGGATGC  750

seq1  CCCAGGTCCTAGTGTAAAGAGTGTCTGGCTGAGAATTC  787
      ||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTCCTAGTGTAAAGAGTGTCTGGCTGAGAATTC  788