BAC Information

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BAC

Clone NameB6Ng01-238N11
Chromosome14 (Build37)
Map Location 90,100,116 - 90,101,114
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG328451, LOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238N11.bB6Ng01-238N11.g
ACCGA049432GA049433
length1,0081,181
definitionB6Ng01-238N11.b B6Ng01-238N11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagctgcctcaactaggaaagaagataagcaatcttcactct
cctttatctctccagtcctccagtcttatctccagctgaaacagaccatg
tcctctggtctttccctctctgctgccattcataggaaactatacggatc
ccggggacacaccctaatttcctcccttctgtggaacacttcagcaacca
tatctaattactccatttatcttctattcctattactgtgtcacttttta
aaaaaagtctaaaaatacattctacctagaaactctagtagctgcatgca
tctacaggcttttccactcatgctccagactaacaactcggaagcttatt
atttattaaaacatgcctaggccttaagctaggcttgtttgctaactagc
acataatgtatgtaaccagagacatggcagacatggaatagtacaaacat
ctcatgtcacatatcctactttctcaaagttcaggtagaaaatctcctgt
gtctgattatttccctgagttcttggtatgccagactttcttctttcttt
tctcttctctttctcttctcttctctttcctcctctccccttccctcttc
tcccctccgctcttctcccctcccctcctctctcctctcaccctctctcc
ccctctaccccctctttctctttttctctttctctttctctttctctttt
tctttttctctttctctttctcttctttctttcccctcccctcccctccc
tccctttctttctctctctctctctctctctctctctttctttctttctt
tctttctttctatctttccattttttatgtgttattttatttatattcct
ttctctaacttcatctgttgggaaccccagctcagtccattagtttggct
gctagcattctgcctctgtattatcagtctcctgacggagccttctcagg
agactagctatgtcaggcttcttggtggagcatgcaacttcctggcaatc
cacaattg

gaattctattagctcttaaaagaggacctaattccaatactcctcaaact
attctacaaactagaaacagaaggtactctagccaatttgttttatgaaa
cttgaattactctgatacctaaaccacacaaagatccaacaaagaaagag
gacttcagaccaatttcccttatgaatatcgatgcaaaaatactccacaa
attctcacaaacctaatcaaaataatcatccatcatgatcaactaggctt
tatccccgggatgcagagatggcttaaaatacggaaatctaccaatgcaa
tccactatataaaccaactcaaagaaaaaaatcatatgactatctcatta
gatgctgagagagcattcaataatattcaacaccccttcatgaagaaagt
ctaagaaaaaataagaattcaaggcccatacttaacatagtaaacatcaa
tctacagcaaactagtagccacatagggttttttttttttttatgtgtta
caattgaactgggagtgcaaaacacttgattatataaattctaagtctat
tttaaaaagttaaatttaattaaatgaaaagtataatttaaagaaaaaat
gaatatttggagggctgatgaaactccttgggtggtaaaagccttagtat
catgactgaacacctgaattccttgagacctctgtgataaaggaagagcg
ctaactggctgctgcaagttatcctctgtgttctatgttatgtatgcatg
gctttgcaggaatatgtgtacatatgcacaaaaatattttaatatgtaaa
tgcactttataaacaatttaaaatatctgctgggaaaaaagaatacactt
tgtatttatatttagattacttgaattctgaaatgataggaacatatagt
tgtgaataatcaatatgacgaaaatgcattatatcaggaaattgtgtttt
ttcagtataattgacaccatagaaaacaaatcccatgcagaagtttagag
acagcaggtatacttttatggtactctttttttcattatgtgaatcacat
acggaaatattgaaataatccggtgcatattcaatagtgaaagaaggaag
atgtttatattgtgccatttaaggttattgccatggtgtatccatggtgg
ctcatgtatctctcgcagacgcagtgttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90100116_90101114
seq2: B6Ng01-238N11.b_49_1056

seq1  GAATTCTCTAGCTGCCTCAACTAGGAAAGAAGATAAGCAATCTTCACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGCTGCCTCAACTAGGAAAGAAGATAAGCAATCTTCACTCT  50

seq1  CCTTTATCTCTCCAGTCCTCCAGTCTTATCTCCAGCTGAAACAGACCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATCTCTCCAGTCCTCCAGTCTTATCTCCAGCTGAAACAGACCATG  100

seq1  TCCTCTGGTCTTTCCCTCTCTGCTGCCATTCATAGGAAACTATACGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGTCTTTCCCTCTCTGCTGCCATTCATAGGAAACTATACGGATC  150

seq1  CCGGGGACACACCCTAATTTCCTCCCTTCTGTGGAACACTTCAGCAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGACACACCCTAATTTCCTCCCTTCTGTGGAACACTTCAGCAACCA  200

seq1  TATCTAATTACTCCATTTATCTTCTATTCCTATTACTGTGTCACTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATTACTCCATTTATCTTCTATTCCTATTACTGTGTCACTTTTTA  250

seq1  AAAAAAGTCTAAAAATACATTCTACCTAGAAACTCTAGTAGCTGCATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTCTAAAAATACATTCTACCTAGAAACTCTAGTAGCTGCATGCA  300

seq1  TCTACAGGCTTTTCCACTCATGCTCCAGACTAACAACTCGGAAGCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGGCTTTTCCACTCATGCTCCAGACTAACAACTCGGAAGCTTATT  350

seq1  ATTTATTAAAACATGCCTAGGCCTTAAGCTAGGCTTGTTTGCTAACTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAAAACATGCCTAGGCCTTAAGCTAGGCTTGTTTGCTAACTAGC  400

seq1  ACATAATGTATGTAACCAGAGACATGGCAGACATGGAATAGTACAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGTATGTAACCAGAGACATGGCAGACATGGAATAGTACAAACAT  450

seq1  CTCATGTCACATATCCTACTTTCTCAAAGTTCAGGTAGAAAATCTCCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTCACATATCCTACTTTCTCAAAGTTCAGGTAGAAAATCTCCTGT  500

seq1  GTCTGATTATTTCCCTGAGTTCTTGGTATGCCAGACTTTCTTCTTTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATTATTTCCCTGAGTTCTTGGTATGCCAGACTTTCTTCTTTCTTT  550

seq1  TCTCTTCTCTTTCTCTTCTCTTCTCTTTCCTCCTCTCCCCTTCCCTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCTTTCTCTTCTCTTCTCTTTCCTCCTCTCCCCTTCCCTCTTC  600

seq1  TCCCCTCCGCTCTTCTCCCCTCCCCTCCTCTCTCCTCTCTCCCTCTCTCC  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCCCCTCCGCTCTTCTCCCCTCCCCTCCTCTCTCCTCTCACCCTCTCTCC  650

seq1  CCCTCTCCCCCCTCTTTCTCTTTTTCTCTTTCTCTTTCTCTTTCTCTTTT  700
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTACCCCCTCTTTCTCTTTTTCTCTTTCTCTTTCTCTTTCTCTTTT  700

seq1  TCTTTTTCTCTTTCTCTTTCTCTTCTTTCTTTCCCCTCCCCTCCCCTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTCTTTCTCTTTCTCTTCTTTCTTTCCCCTCCCCTCCCCTCCC  750

seq1  T-CCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTT  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTT  800

seq1  TCTTTCTTTCTATCTTTCCA-TTTTTATGTGTTATTTTATTTTATTATTC  848
      |||||||||||||||||||| |||||||||||||||||||||   |||||
seq2  TCTTTCTTTCTATCTTTCCATTTTTTATGTGTTATTTTATTT--ATATTC  848

seq1  CTTTCTCTAAC-TCATCTGTTGGGAACCCCAAGCTCAGTCCAATAG-TTG  896
      ||||||||||| |||||||||||||||||| ||||||||||| ||| |||
seq2  CTTTCTCTAACTTCATCTGTTGGGAACCCC-AGCTCAGTCCATTAGTTTG  897

seq1  GCTGCTAGCA-TCTGCCTCTGTATTTATCAGTCT-CTGACAGAGCC-TCT  943
      |||||||||| |||||||||||| |||||||||| ||||| ||||| |||
seq2  GCTGCTAGCATTCTGCCTCTGTA-TTATCAGTCTCCTGACGGAGCCTTCT  946

seq1  CAGGAGAC-AGCTATGTCAGGCT--CTGGT-GAGCATGC-ACTTCTTGGC  988
      |||||||| ||||||||||||||   |||| |||||||| ||||| ||||
seq2  CAGGAGACTAGCTATGTCAGGCTTCTTGGTGGAGCATGCAACTTCCTGGC  996

seq1  -ATCCACAATTG  999
       |||||||||||
seq2  AATCCACAATTG  1008


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