BAC Information

Click to search

BAC

Clone NameB6Ng01-239G09
Chromosome14 (Build37)
Map Location 113,531,756 - 113,532,793
singlet/doubletsinglet
Overlap genenone
Upstream geneEG223186, LOC100043509
Downstream geneTpm3-rs7, LOC100043510, LOC382947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239G09.bB6Ng01-239G09.g
ACCGA049836GA049837
length1,0501,151
definitionB6Ng01-239G09.b B6Ng01-239G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgttacaataaccaaatcctatacaactatatatatagttg
tatatgtatatatatatatatatatatatatatatatatatatatatata
tatatttgtatatgtatatatatatatatacatatatatacacacacata
aggttattaatatttcaattaggttgttaatatttaggttaggttaatat
ttaggttgttaatatttcatatatgaatcattattttacaagaaaaatct
gaggataactaaaagagtagaataattttaatccaacttcaaagattcag
tgtcctagtttggagaatatgttattcaaaagaagcaaagtcatttgtta
tgttgtcattatttcccaatagttctgtacagcaataatagtgaaacatt
gattaacatgacatgtttttactatatctgtttagcaacattaaaagcaa
attttcagttctggggcttatgaaccagccacggattcttgaccaaattt
tcaacaataagcataagctttacattgtggaagggggtcttaaattcaac
cagaaaatggttatccttataacaactatgccattgttacagaaaggaca
tctgttgcaagcttgggtgtcatagcagcttacagagttcatagatcttc
aaacacattgctaattttctttcctggatattagcatagtactctcttac
aatagatatattgtcaaaacatgtctagaagtttccatgtggaaggattt
tttattacatttacttccacacatttcatttatttgttattgttatttca
actcttgttttattgtttccattatttgtggatgttataaaatcattgtt
taatttaaggtttgttttatttttatttctctgtctgtacctatgtacat
gtatgctcctatgagtagtgtctgtagaagctagaaaagcactgggttct
tgtggagccaaaggtgacagcagatatgagccaccttcttagaggtttga
gttgagccaccctcttcagaagccaaaggaggagtatgggtgaaaaacct

gaattcaatcagactgtcaaagaacaaagtgtcacataagatataaatgg
aagggttatatttgagggtgattgtgtgcattgcattcagatgctgtttc
ctatacccaaaaatctggtttcagtccagatgaagacttggttaagtgtc
tctggtctctatgttatctaaaaagtgttttctatcacttctgattggtt
aataaagagcttattagccaattaggttggtagaaaaaatagggcagggc
ttctgattgaagtcatggggtctcagagaaagacagaagggtagaagaga
accatggaagaaggacgtggagagaccatgtggatagaccatgagcattc
actctgaaatccctatgagagcagccaagaaggcacacatgcaccagcgg
cagccaaggcaagactcagattcaggtacagtgccctttgtgtggatagt
agcagcctagtcaggttagaatagatcagagtcattccagcttagcgttt
gcagcttgttaataaaaatacaaggtctctgtgtctttattagagggcta
aagtgggctagagctcacatagaaacatcctccatttattggggtacaag
gggagtggagataaccccacaagaattataattatagaaatatttataac
ttattttatgaaaccaatattatctcaatttcaaaatcagataaagacat
taacagtgataaaaataacaaggtcattctccatgagagagctatctctc
tcaagctcttagatacaaaaattcctcataaaatactttcagaacaaact
aaagaactatattagttagggtttccatcactgtgaagaaacaccatgac
caaggaaactcttataaagagcaacatttaatgggggctgacttacagga
actgaggttcagtccatggtcatcatagcaggaagcatggcagcatgcag
aggcatggcactgggaggagctgagagttctacattgtgattgatgcaca
gagaaagctgatttcaggtagcagagacgttgtaaaccagcctatgacac
actcttcaccagcatactcaaagaagttcgacttgcggtgagttatttca
atcactcaatggatcatttccaaaattattcaccccacttatgtccaaga
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113531756_113532793
seq2: B6Ng01-239G09.b_32_1079 (reverse)

seq1  GTTTTTCACCCTAACTCCTC--TTTGCTTCTG-AGAGGGT-GCTC-ACTC  45
      |||||||||||  |||||||  || ||||||| ||||||| |||| ||||
seq2  GTTTTTCACCCATACTCCTCCTTTGGCTTCTGAAGAGGGTGGCTCAACTC  50

seq1  -AACCTCTAA-AAGGTGGCTCATATCTGCTTTCACCTTTGGCTCCAC-AG  92
       ||||||||| ||||||||||||||||||| |||||||||||||||| ||
seq2  AAACCTCTAAGAAGGTGGCTCATATCTGCTGTCACCTTTGGCTCCACAAG  100

seq1  AACCCAGTGCTTTTTCTAGCTTCTACAGACACTACTCATAGGAGCATACA  142
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTGC-TTTTCTAGCTTCTACAGACACTACTCATAGGAGCATACA  149

seq1  TGTACATAGGTACAGACAGAGAAATAAAAATAAAACAAACCTTAAATT-A  191
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTACATAGGTACAGACAGAGAAATAAAAATAAAACAAACCTTAAATTAA  199

seq1  ACAATGATTTTATAACATCCAC-AATAATGGAAACAATTAAACAAGAGTT  240
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  ACAATGATTTTATAACATCCACAAATAATGGAAACAATAAAACAAGAGTT  249

seq1  GAAATAACAATAACAAAATAAATGAAATGTGTGGAAGTAAATGTAAT-AA  289
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  GAAATAACAATAAC-AAATAAATGAAATGTGTGGAAGTAAATGTAATAAA  298

seq1  AAATCCTTCCACATGGAAACTTCTAGACATG-TTTGACAATATATCTATT  338
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAATCCTTCCACATGGAAACTTCTAGACATGTTTTGACAATATATCTATT  348

seq1  GTAAGAGAGTACTATGCTAATATCCAGGAAAGAAAATTAGCAATGTGTTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGAGTACTATGCTAATATCCAGGAAAGAAAATTAGCAATGTGTTT  398

seq1  GAAGATCTATGAACTCTGTAAGCTGCTATGACACCCAAGCTTGCAACAGA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCTATGAACTCTGTAAGCTGCTATGACACCCAAGCTTGCAACAGA  448

seq1  TGTCCTTTCTGTAACAATGGCATAGTTGTTATAAGGATAACCATTTTCTG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTCTGTAACAATGGCATAGTTGTTATAAGGATAACCATTTTCTG  498

seq1  GTTGAATTTAAGACCCCCTTCCACAATGTAAAGCTTATGCTTATTGTTGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTTAAGACCCCCTTCCACAATGTAAAGCTTATGCTTATTGTTGA  548

seq1  AAATTTGGTCAAGAATCCGTGGCTGGTTCATAAGCCCCAGAACTGAAAAT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGGTCAAGAATCCGTGGCTGGTTCATAAGCCCCAGAACTGAAAAT  598

seq1  TTGCTTTTAATGTTGCTAAACAGATATAGTAAAAACATGTCATGTTAATC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTAATGTTGCTAAACAGATATAGTAAAAACATGTCATGTTAATC  648

seq1  AATGTTTCACTATTATTGCTGTACAGAACTATTGGGAAATAATGACAACA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCACTATTATTGCTGTACAGAACTATTGGGAAATAATGACAACA  698

seq1  TAACAAATGACTTTGCTTCTTTTGAATAACATATTCTCCAAACTAGGACA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATGACTTTGCTTCTTTTGAATAACATATTCTCCAAACTAGGACA  748

seq1  CTGAATCTTTGAAGTTGGATTAAAATTATTCTACTCTTTTAGTTATCCTC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCTTTGAAGTTGGATTAAAATTATTCTACTCTTTTAGTTATCCTC  798

seq1  AGATTTTTCTTGTAAAATAATGATTCATATCTGAAATATTAACAACCTAA  838
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGATTTTTCTTGTAAAATAATGATTCATATATGAAATATTAACAACCTAA  848

seq1  ATATTAACCTAACCTAAATATTAACAACCTAATTGAAATATTAATAACCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACCTAACCTAAATATTAACAACCTAATTGAAATATTAATAACCT  898

seq1  AATGTGTGTGTATATATATGTATATATATATATATACATATACAAATATA  938
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGTATATATATGTATATATATATATATACATATACAAATATA  948

seq1  TATATATATATATATATATATATATATATATATATATATATATACATATA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATATACATATA  998

seq1  CAACTATATATATAGTTGTATAGGATTTGGTTATTGTAACAGAAGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATATATATAGTTGTATAGGATTTGGTTATTGTAACAGAAGAATTC  1048