BAC Information

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BAC

Clone NameB6Ng01-239H11
Chromosome14 (Build37)
Map Location 62,742,965 - 62,871,319
singlet/doubletdoublet
Overlap genenone
Upstream geneSacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
Downstream geneDleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239H11.bB6Ng01-239H11.g
ACCGA049884GA049885
length375567
definitionB6Ng01-239H11.b B6Ng01-239H11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,742,965 - 62,743,339)(62,870,747 - 62,871,319)
sequence
cttttatatagattactgtggccaaaacatgaaggcgacacatgaaaata
agactcttgttgttatctcgaacaatcatatagagttgctaattatacta
aaagagaaacaaccaagtatctacctgtggggaaagctaccagtacacat
aaatatttcttgccctttcccccaccaaaaaaaaatcaaaacaaaacaaa
gatgtgaatcaacatctggctaagaattttagatctaaaggcaggaaacc
cagaggacagagcagcaaagccccagggaggcaatcagacagcgcagact
gtgggaagttctacaagacacagggtcagggttatttaagcaataattat
atgaggggggggtgtgaggagagga
aaccttgtgcttccaaaattgctgtaaggacaatgaagccacatgaagtc
tgaaccattacaagaaggtatcagaatttaatgctcgatcagagttttcc
agaaactacatatgcatccactgggagatggattaatagtcattctaaat
ttcaatccacagtgcattgattaatcccacccccaccccaaccctgctct
gtggactctgcccaccttatatggctgaagtcgagtaaaagggatgagat
gtttccgtaccaaccagaagagggcagtgttgagtcaccgatctcatttg
aactaatcatgtcagcagggcagcacacagccttctatctccttccccat
aaaacaagacagaaaagggctacacaaagttggaaaatacaggcttatag
acacaatgctgaaggttgacatgctggaatgatgtaagattgggagtggg
agcaggtggatggatggggaaaagatgctgtataaagtgggggctacctg
gtctctgctgaacaagctgatctcgttatctgtggggttttaatatttgt
tttctatctatctatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_62742965_62743339
seq2: B6Ng01-239H11.b_48_422

seq1  CTTTTATATAGATTACTGTGGCCAAAACATGAAGGCGACACATGAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATATAGATTACTGTGGCCAAAACATGAAGGCGACACATGAAAATA  50

seq1  AGACTCTTGTTGTTATCTCGAACAATCATATAGAGTTGCTAATTATACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTGTTGTTATCTCGAACAATCATATAGAGTTGCTAATTATACTA  100

seq1  AAAGAGAAACAACCAAGTATCTACCTGTGGGGAAAGCTACCAGTACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAACAACCAAGTATCTACCTGTGGGGAAAGCTACCAGTACACAT  150

seq1  AAATATTTCTTGCCCTTTCCCCCACCAAAAAAAAATCAAAACAAAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTCTTGCCCTTTCCCCCACCAAAAAAAAATCAAAACAAAACAAA  200

seq1  GATGTGAATCAACATCTGGCTAAGAATTTTAGATCTAAAGGCAGGAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAATCAACATCTGGCTAAGAATTTTAGATCTAAAGGCAGGAAACC  250

seq1  CAGAGGACAGAGCAGCAAAGCCCCAGGGAGGCAATCAGACAGCGCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACAGAGCAGCAAAGCCCCAGGGAGGCAATCAGACAGCGCAGACT  300

seq1  GTGGGAAGTTCTACAAGACACAGGGTCAGGGTTATTTAAGCAATAATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGTTCTACAAGACACAGGGTCAGGGTTATTTAAGCAATAATTAT  350

seq1  ATGAGGGGGGGGTGTGAGGAGAGGA  375
      |||||||||||||||||||||||||
seq2  ATGAGGGGGGGGTGTGAGGAGAGGA  375

seq1: chr14_62870747_62871319
seq2: B6Ng01-239H11.g_65_637 (reverse)

seq1  AGATAGATAGATAGAAAACAAATATTAAAACCCCACAGCTAACGAGATCA  50
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGATAGATAGATAGAAAACAAATATTAAAACCCCACAGATAACGAGATCA  50

seq1  GCTTGTTCAGCAGAGACCAGGTAGCCCCCACTTTATACAGCATCTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTCAGCAGAGACCAGGTAGCCCCCACTTTATACAGCATCTTTTCC  100

seq1  CCATCCATCCACCTGCTCCCACTCCCAATCTTACATCATTCCAGCATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCACCTGCTCCCACTCCCAATCTTACATCATTCCAGCATGTC  150

seq1  AACCTTCAGCATTGTGTCTATAAGCCTGTATTTTCCAACTTTGTGTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCAGCATTGTGTCTATAAGCCTGTATTTTCCAACTTTGTGTAGCC  200

seq1  CTTTTCTGTCTTGTTTTATGGGGAAGGAGATAGAAGGCTGTGTGCTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGTCTTGTTTTATGGGGAAGGAGATAGAAGGCTGTGTGCTGCCC  250

seq1  TGCTGACATGATTAGTTCAAATGAGATCGGTGACTCAACACTGCCCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACATGATTAGTTCAAATGAGATCGGTGACTCAACACTGCCCTCTT  300

seq1  CTGGTTGGTACGGAAACATCTCATCCCTTTTACTCGACTTCAGCCATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGGTACGGAAACATCTCATCCCTTTTACTCGACTTCAGCCATATA  350

seq1  AGGTGGGCAGAGTCCACAGAGCAGGGTTGGGGTGGGGGTGGGATTAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGCAGAGTCCACAGAGCAGGGTTGGGGTGGGGGTGGGATTAATCA  400

seq1  ATGCACTGTGGATTGAAATTTAGAATGACTATTAATCCATCTCCCAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTGTGGATTGAAATTTAGAATGACTATTAATCCATCTCCCAGTGG  450

seq1  ATGCATATGTAGTTTCTGGAAAACTCTGATCGAGCATTAAATTCTGATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATGTAGTTTCTGGAAAACTCTGATCGAGCATTAAATTCTGATAC  500

seq1  CTTCTTGTAATGGTTCAGACTTCATGTGGCTTCATTGTCCTTACAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTAATGGTTCAGACTTCATGTGGCTTCATTGTCCTTACAGCAAT  550

seq1  TTTGGAAGCACAAGGTTGAATTC  573
      |||||||||||||||||||||||
seq2  TTTGGAAGCACAAGGTTGAATTC  573