BAC Information

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BAC

Clone NameB6Ng01-240C08
Chromosome14 (Build37)
Map Location 74,519,315 - 74,520,438
singlet/doubletsinglet
Overlap genenone
Upstream geneRcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
Downstream geneLOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240C08.bB6Ng01-240C08.g
ACCGA050390GA050391
length1,1161,175
definitionB6Ng01-240C08.b B6Ng01-240C08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagagcatgggaagatgaaggttgggactgaggaggtggctta
gtggccagtgtttgctactcaagcatgaaactctacatttggattgtagg
cactcaagtaaaggctaggcacggtgacataagcctataagcccagcact
gtggaaggtggaggcaggtagattctaaaggattgctgaccacacagcct
agctgaaatggcacactccagatttcaggagcaaccctgttatgatttta
atgtgaaatgttctcccttggtttgtaggcttcacccctcagttcagagc
tgatagagttgcttggaaagcttgtgaaacttttaggaggcatagcctca
gtggaacaggtgggtctctgaagctttgtagtctacttcctattcagtct
atttcctgattctagatgtaatgtgaccagctggcatcttgctcctccta
ctatgtttccctgctccagtgctgggttttaaccactatgatgcccactg
gaactttgacacaaaatcagccacttttgcattatgttgctttcgttggg
gcacttcatcatatcaacgagaaatgaactgagccccatcttgtctgaag
aggtaaggctgagaagcaattgggagagaaacactggaaattgacatggt
tggaaagcacagagataccaggatgcttgttcctgcacatatctatacat
atgcatatgtgtgcatgaacatgcatacatgcacacacacacagagacac
aggaaaagtagggaagaggacaaaggcacaactgagcaaacttgtttatc
tatgaggatgctgaggtgtggaaagagaattactgtgttacaggctgttc
cagaagcgtggaagaagagataaaacagggaaggaagttggtggtcaata
ttctattcagacaaaggagtggtctgtcatatgctttactaataggggtc
aagttcatggtgaaggaaattgaaactcgtagatgaggtcaaatgtcaaa
taatgatgtcatgtataagataaaaagatgtagtgtagatgtctaaaaac
acagacctgtattatttgtgactattgtgaaagtgttgttcataagttct
tcctcagctgtttatc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagacagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaacgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatccccggggcctagcaac
acagaagtggatgctcacagtcagctaatggaatggatcacagggctccc
aatggaggagctagagaaagtatccaaggagctaaagggatctcacccta
taggtgaaaacatatgaactaacagtacccctggagctctgactctagct
gcatatgtatcaaaagatgcttagtcgtcatcactgcaaagaagagtcat
gaaccgcagaacttgtgtgcccgtacgaacgcaggtcaaggggtaattgc
gttgctaagtgtcatcctatactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74519315_74520438
seq2: B6Ng01-240C08.b_45_1160

seq1  GAATTCACAGAGCATGGGAAGATGAAGGTTGGGACTGAGGAGGTGGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAGCATGGGAAGATGAAGGTTGGGACTGAGGAGGTGGCTTA  50

seq1  GTGGCCAGTGTTTGCTACTCAAGCATGAAACTCTACATTTGGATTGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGTGTTTGCTACTCAAGCATGAAACTCTACATTTGGATTGTAGG  100

seq1  CACTCAAGTAAAGGCTAGGCACGGTGACATAAGCCTATAAGCCCAGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAGTAAAGGCTAGGCACGGTGACATAAGCCTATAAGCCCAGCACT  150

seq1  GTGGAAGGTGGAGGCAGGTAGATTCTAAAGGATTGCTGACCACACAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGTGGAGGCAGGTAGATTCTAAAGGATTGCTGACCACACAGCCT  200

seq1  AGCTGAAATGGCACACTCCAGATTTCAGGAGCAACCCTGTTATGATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAATGGCACACTCCAGATTTCAGGAGCAACCCTGTTATGATTTTA  250

seq1  ATGTGAAATGTTCTCCCTTGGTTTGTAGGCTTCACCCCTCAGTTCAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATGTTCTCCCTTGGTTTGTAGGCTTCACCCCTCAGTTCAGAGC  300

seq1  TGATAGAGTTGCTTGGAAAGCTTGTGAAACTTTTAGGAGGCATAGCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGTTGCTTGGAAAGCTTGTGAAACTTTTAGGAGGCATAGCCTCA  350

seq1  GTGGAACAGGTGGGTCTCTGAAGCTTTGTAGTCTACTTCCTATTCAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAGGTGGGTCTCTGAAGCTTTGTAGTCTACTTCCTATTCAGTCT  400

seq1  ATTTCCTGATTCTAGATGTAATGTGACCAGCTGGCATCTTGCTCCTCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGATTCTAGATGTAATGTGACCAGCTGGCATCTTGCTCCTCCTA  450

seq1  CTATGTTTCCCTGCTCCAGTGCTGGGTTTTAACCACTATGATGCCCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCCCTGCTCCAGTGCTGGGTTTTAACCACTATGATGCCCACTG  500

seq1  GAACTTTGACACAAAATCAGCCACTTTTGCATTATGTTGCTTTCGTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTGACACAAAATCAGCCACTTTTGCATTATGTTGCTTTCGTTGGG  550

seq1  GCACTTCATCATATCAACGAGAAATGAACTGAGCCCCATCTTGTCTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCATCATATCAACGAGAAATGAACTGAGCCCCATCTTGTCTGAAG  600

seq1  AGGTAAGGCTGAGAAGCAATTGGGAGAGAAACACTGGAAATTGACATGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGGCTGAGAAGCAATTGGGAGAGAAACACTGGAAATTGACATGGT  650

seq1  TGGAAAGCACAGAGATACCAGGATGCTTGTTCCTGCACATATCTATACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGCACAGAGATACCAGGATGCTTGTTCCTGCACATATCTATACAT  700

seq1  ATGCATATGTGTGCATGAACATGCATACATGCACACACACACAGAGACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATGTGTGCATGAACATGCATACATGCACACACACACAGAGACAC  750

seq1  AGGAAAAGTAGGGAAGAGGACAAAGGCACAACTGAGCAAACTTGTTTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGTAGGGAAGAGGACAAAGGCACAACTGAGCAAACTTGTTTATC  800

seq1  TATGAGGATGCTGAGGTGTGGAAAGAGAATTACTGTGTTACAGGCTGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGATGCTGAGGTGTGGAAAGAGAATTACTGTGTTACAGGCTGTTC  850

seq1  CAGAAGCGTGGAAGAAGAGATAAAACAGGGAAGGAAGTTGGTGGTCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCGTGGAAGAAGAGATAAAACAGGGAAGGAAGTTGGTGGTCAATA  900

seq1  TTCTATTCAGACAAAGGAGTGGTCTGTCATATGCTTTACTAATAGGGGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCAGACAAAGGAGTGGTCTGTCATATGCTTTACTAATAGGGGTC  950

seq1  AAGTTCATGGTGAAGGAAATTGAAACTCGTAGATGAGGTCAAATTGTCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  AAGTTCATGGTGAAGGAAATTGAAACTCGTAGATGAGGTCAAA-TGT-CA  998

seq1  AATAATGATGTCATGTATAAGATAAAAAGATGTAGTTGTAGATGTCCTAA  1050
      ||||||||||||||||||||||||||||||||||| ||||||||||  ||
seq2  AATAATGATGTCATGTATAAGATAAAAAGATGTAG-TGTAGATGTCTAAA  1047

seq1  AACACAGACCTTGTATTATTTGTGACTATTGTGAAAGGTGTTGTTTCCAT  1100
      |||||||||| ||||||||||||||||||||||||| ||||||||  |||
seq2  AACACAGACC-TGTATTATTTGTGACTATTGTGAAA-GTGTTGTT--CAT  1093

seq1  AATTTCTTTCTCAGCCTGTTTATC  1124
      || ||||| ||||| |||||||||
seq2  AAGTTCTTCCTCAG-CTGTTTATC  1116