BAC Information

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BAC

Clone NameB6Ng01-240K08
Chromosome14 (Build37)
Map Location 68,883,726 - 68,884,783
singlet/doubletsinglet
Overlap genenone
Upstream geneEbf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
Downstream geneAdam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240K08.bB6Ng01-240K08.g
ACCGA050763GA050764
length1,2141,064
definitionB6Ng01-240K08.b B6Ng01-240K08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctgttgagaattctctgtttagctctgtagcccattttaatt
gggtaatttagtttgttggtgtgttaatttcttgagtttttaaatatttc
tttcaatactaatcctctgttagatgtagagttggtgaagatctttttcc
attctgtaggctgcagttttgtcctatttatggtatcctttgcatgacag
gaactttttaatttcatggggtctcaattattaactgtcattcttagtgc
ctgagctattctgttcaggaagttgtctcctgtgccaatgtgttcaaagc
aattccccactttcttttctattagatttagtggatgtgcttttttgcct
cagtctttgatccacttggatttgagctttgtgcagagtgataaatatgg
atctatttgcatccttctacatgcagacttccagttataccagcaccatt
tgcagagatgcttttttttccccattgtatgattttagtgtctttgtcaa
aaaacaaacaaacaaaaaacaaaaaacaagtttccacagatgtgtgtatt
taatactgggtctttgattcacttccattgatcaacttgtctggtttaca
cccgtaccatgcagtttttattgctattgctctgtagttcaacttgaaat
caagaatagtgatacctccagaagttcttttattatacaggaatttttta
gctgtcctgggattttattttttccatatgcaattgataattgctctttc
aacatctataaagaattgttttagaactttgatgggaattacattgaatc
tgtagattgccatgggtaagataatgatgttttttctaagtttatcctac
tgatctatgaacatgggatatcttttcatcttctgatatcttattcaatt
ttctttctaacagagatttgaagttcttgtcatacagatattttaatttc
ttggttagaggtacatcaaggatattttaaattatttgtgactgttttaa
agggtgttgttttttcttaatttcctttctaagcccatttatcatttggc
aataaaggggactattgatttttttttatttaattttgtattcatccact
ttgcttgaagagtcttgggaatattttgggggtcatttatgttaggtcag
tgaaaagaggaatacttggacttttgcatttccagatcataatctctccg
tggtactcacgcct
gaattccccattcagggatgtggtggctgtgaccatgtgtttccagattg
tgccctgagcctgatgaacatggagatcacccttgttttctgcctgagaa
caccttttcccccagtgtgataaagggaatggaatttagtgggtggaaga
tgacagttaagagttgtgaagtcagagatgtgtttgggaattatggtcca
ggggcaatatggggagggatattgaagacatcaaactatgcaaaggcaca
aaaccaaccaaacaaaaactgacaagaacaaagagcacaataaagacacc
aggaaaattaatttagggtatctgtctaattgtcctgctgtgagtgactg
agtgctgaggtacacatgtgcagtacaagttcacagtgagataaagcatg
cttatattacggtgaaccacactgaagatatcttatggaatataccattg
tgcaaaacaaaataaagcaaaacaaaacaaaaaaacccaaacaacaacaa
ccccttccaaaccaaacaataaaaccaatgagaactaggagtttttcaag
gatgaccaaagtgaattattccctctaacagagccaagctcattaaactg
cagagtcaggttagcaagctatcaaaaaggagtcttgaaaagatagagca
tgcccacaaatctgtctctattaagtgtggacaacaagattcagagactt
gattaagtaatttttacaattgccacttccccccacctcccaaaaaggat
gctttatatgcaaaggagcaagaattgtgtccaatatccagctaatgaaa
gcaacaaaaatagattaaaagtgatataaatgacagaatttggtaagccc
ttaggcaactctgaacaacaatagatatgtgcatggatttaaagaaacag
gaacagaatggagacacaacagagaaatatacagtaaatttattatgttg
agaatcacagccgtcagacactgaggttaccactacgttggttttcatca
ggcagagtagaatcaggagaggataagtagcaaagagtattgaaagatgt
gccaattaaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68883726_68884783
seq2: B6Ng01-240K08.g_65_1128

seq1  GAATTCCCCATTCAGGGATGTGGTGGCTGTGACCATGTGTTTCCAGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCATTCAGGGATGTGGTGGCTGTGACCATGTGTTTCCAGATTG  50

seq1  TGCCCTGAGCCTGATGAACATGGAGATCACCCTTGTTTTCTGCCTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGAGCCTGATGAACATGGAGATCACCCTTGTTTTCTGCCTGAGAA  100

seq1  CACCTTTTCCCCCAGTGTGATAAAGGGAATGGAATTTAGTGGGTGGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTCCCCCAGTGTGATAAAGGGAATGGAATTTAGTGGGTGGAAGA  150

seq1  TGACAGTTAAGAGTTGTGAAGTCAGAGATGTGTTTGGGAATTATGGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTAAGAGTTGTGAAGTCAGAGATGTGTTTGGGAATTATGGTCCA  200

seq1  GGGGCAATATGGGGAGGGATATTGAAGACATCAAACTATGCAAAGGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAATATGGGGAGGGATATTGAAGACATCAAACTATGCAAAGGCACA  250

seq1  AAACCAACCAAACAAAAACTGACAAGAACAAAGAGCACAATAAAGACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACCAAACAAAAACTGACAAGAACAAAGAGCACAATAAAGACACC  300

seq1  AGGAAAATTAATTTAGGGTATCTGTCTAATTGTCCTGCTGTGAGTGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATTAATTTAGGGTATCTGTCTAATTGTCCTGCTGTGAGTGACTG  350

seq1  AGTGCTGAGGTACACATGTGCAGTACAAGTTCACAGTGAGATAAAGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGAGGTACACATGTGCAGTACAAGTTCACAGTGAGATAAAGCATG  400

seq1  CTTATATTACGGTGAACCACACTGAAGATATCTTATGGAATATACCATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTACGGTGAACCACACTGAAGATATCTTATGGAATATACCATTG  450

seq1  TGCAAAACAAAATAAAGCAAAACAAAACAAAAAAACCCAAACAACAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACAAAATAAAGCAAAACAAAACAAAAAAACCCAAACAACAACAA  500

seq1  CCCCTTCCAAACCAAACAATAAAACCAATGAGAACTAGGAGTTTTTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCAAACCAAACAATAAAACCAATGAGAACTAGGAGTTTTTCAAG  550

seq1  GATGACCAAAGTGAATTATTCCCTCTAACAGAGCCAAGCTCATTAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCAAAGTGAATTATTCCCTCTAACAGAGCCAAGCTCATTAAACTG  600

seq1  CAGAGTCAGGTTAGCAAGCTATCAAAAAGGAGTCTTGAAAAGATAGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCAGGTTAGCAAGCTATCAAAAAGGAGTCTTGAAAAGATAGAGCA  650

seq1  TGCCCACAAATCTGTCTCTATTAAGTGTGGACAACAAGATTCAGAGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACAAATCTGTCTCTATTAAGTGTGGACAACAAGATTCAGAGACTT  700

seq1  GATTAAGTAATTTTTACAATTGCCACTTCCCCCCACCTCCCAAAAAGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGTAATTTTTACAATTGCCACTTCCCCCCACCTCCCAAAAAGGAT  750

seq1  GCTTTATATGCAAAGGAGCAAGAATTGTGTCCAATATCCAGCTAATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATATGCAAAGGAGCAAGAATTGTGTCCAATATCCAGCTAATGAAA  800

seq1  GCAACAAAAATAGATTAAAAGTGATATAAATGACAGAA-TTGGTAAGCCC  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAACAAAAATAGATTAAAAGTGATATAAATGACAGAATTTGGTAAGCCC  850

seq1  TTAGGCAACTCTGAAACAACAATAGATATGTGCATGGATTTAAAGAAAAC  899
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  TTAGGCAACTCTG-AACAACAATAGATATGTGCATGGATTTAAAG-AAAC  898

seq1  AGGAACAGAATGGAGACACAACAGAGAAATATACAGTAAA-TTATTATGT  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGAACAGAATGGAGACACAACAGAGAAATATACAGTAAATTTATTATGT  948

seq1  TGAGAATCACAG-CGTCAGACACTGAGG-TACCACTACGTTGG-TTTCAT  995
      |||||||||||| ||||||||||||||| |||||||||||||| ||||||
seq2  TGAGAATCACAGCCGTCAGACACTGAGGTTACCACTACGTTGGTTTTCAT  998

seq1  CA-GCAGAGTAGGAATCAAGAGAGGATAAGTAGCAAAGAGTA-TGAAAGA  1043
      || |||||||| |||||| ||||||||||||||||||||||| |||||||
seq2  CAGGCAGAGTA-GAATCAGGAGAGGATAAGTAGCAAAGAGTATTGAAAGA  1047

seq1  TGTGC--AATAAAAATT  1058
      |||||  | ||||||||
seq2  TGTGCCAATTAAAAATT  1064