BAC Information

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BAC

Clone NameB6Ng01-240M23
Chromosome14 (Build37)
Map Location 92,651,455 - 92,652,315
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665377
Downstream geneLOC638252, Pcdh9, LOC668566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240M23.bB6Ng01-240M23.g
ACCGA050882GA050883
length8541,182
definitionB6Ng01-240M23.b B6Ng01-240M23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaattataaaaaaaaattgtgtaatctttaaaaatagtgagtc
tgttgaatacattaattttcctcatagattttacagctatccttcttcat
ttattaaggtatttcctgtgaagtattcataaagtatatgaaacaaggca
ttttgctcaattcaatttctaagtaaaggtgatttaaaagtgcttttatt
aaaatggtgaaaaattagactaaaacttatttactttttatttaattatt
tactatttacttcttatatttttgcttgtgaacctagcctgtaaaggctg
agctatctctcctgctctattctttccttcttaaatgggaagtatcacta
cctagcaatccactctttccgggccatagtagaaagtgactcttgtcctt
acatgcaacacaatggctaggtggctagatttataaatttgtgccttttt
gagcatcaattagaaatactctttaactgcgactgtgcagatatatacta
cactcctcccaactcctctctctctctctctctctctctctctctctctc
tctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtatacacgcgcacatgcgaatatgaatgtgtgtaacacccctccac
ttttctgcccccaactctaccattctctattttgtatccctgatattgtc
agtgaccagtggcgggggaagactacagtgcgttcctggggagctcattt
ctctggctctcagactcctagagagatttctcattacttcctttcagcaa
tacctgatgactgaggagataatttactctgggtgattatgattattttt
gtct

gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttt
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttagaagatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagagagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgctgtctactcctcttcggtgaatttgcttccttttttttctagg
gcttttagatgtgttgtcaagctgctagtatgtgctgtcttccagtttct
tcttgggaggcactcaggctatgagtttccctcttagaaatgctttcatt
gtgtcccataggtttgggttacgttgtggcttcaattcatattctctaaa
aagtcttcatttccttctattcgttcttgaccagtatcaatgagaaagga
gggttattcgtttccacggttaattagcctcatataagtgtgcaatgaga
tacgtagctcctagacactgagtggtggcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_92651455_92652315
seq2: B6Ng01-240M23.b_42_895

seq1  GAATTCAAAATTATAAAAAAAAATTGTGTAATCTTTAAAAATAGTGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTATAAAAAAAAATTGTGTAATCTTTAAAAATAGTGAGTC  50

seq1  TGTTGAATACATTAATTTTCCTCATAGATTTTACAGCTATCCTTCTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAATACATTAATTTTCCTCATAGATTTTACAGCTATCCTTCTTCAT  100

seq1  TTATTAAGGTATTTCCTGTGAAGTATTCATAAAGTATATGAAACAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGGTATTTCCTGTGAAGTATTCATAAAGTATATGAAACAAGGCA  150

seq1  TTTTGCTCAATTCAATTTCTAAGTAAAGGTGATTTAAAAGTGCTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCAATTCAATTTCTAAGTAAAGGTGATTTAAAAGTGCTTTTATT  200

seq1  AAAATGGTGAAAAATTAGACTAAAACTTATTTACTTTTTATTTAATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTGAAAAATTAGACTAAAACTTATTTACTTTTTATTTAATTATT  250

seq1  TACTATTTACTTCTTATATTTTTGCTTGTGAACCTAGCCTGTAAAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTACTTCTTATATTTTTGCTTGTGAACCTAGCCTGTAAAGGCTG  300

seq1  AGCTATCTCTCCTGCTCTATTCTTTCCTTCTTAAATGGGAAGTATCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCTCTCCTGCTCTATTCTTTCCTTCTTAAATGGGAAGTATCACTA  350

seq1  CCTAGCAATCCACTCTTTCCGGGCCATAGTAGAAAGTGACTCTTGTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAATCCACTCTTTCCGGGCCATAGTAGAAAGTGACTCTTGTCCTT  400

seq1  ACATGCAACACAATGGCTAGGTGGCTAGATTTATAAATTTGTGCCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAACACAATGGCTAGGTGGCTAGATTTATAAATTTGTGCCTTTTT  450

seq1  GAGCATCAATTAGAAATACTCTTTAACTGCGACTGTGCAGATATATACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCAATTAGAAATACTCTTTAACTGCGACTGTGCAGATATATACTA  500

seq1  CACTCCTCCCAACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTCCCAACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  550

seq1  TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  600

seq1  TGTGTATACACGCGCACATGCGAATATGAATGTGTGTATCTCCCCTCCTC  650
      |||||||||||||||||||||||||||||||||||||| | ||||||| |
seq2  TGTGTATACACGCGCACATGCGAATATGAATGTGTGTAACACCCCTCCAC  650

seq1  TTTTCTGCCCCCAACTCTACCATTCTCTATTTTGTATCCCTGATATTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCCCCCAACTCTACCATTCTCTATTTTGTATCCCTGATATTGTC  700

seq1  AGTGTCCAGCTGC-GGGGAAGACTTCAAGTGCGTTCCTGGGGTGCTTCAT  749
      |||| ||||  || |||||||||| | ||||||||||||||| || ||||
seq2  AGTGACCAGTGGCGGGGGAAGACTAC-AGTGCGTTCCTGGGGAGC-TCAT  748

seq1  TTCCCTGGCCCTCATACTCCTTGAGAGTATTTTCTCATTTAACTTCCTTT  799
      ||| ||||| |||| |||||| |||||   |||||||||  |||||||||
seq2  TTCTCTGGCTCTCAGACTCCTAGAGAG--ATTTCTCATT--ACTTCCTTT  794

seq1  CTGCTAAATTCCTGTTTACTGAAGGAGATAATTAACTCTGGGTGATTATG  849
      | ||  ||| |||| | |||| ||||||||||| ||||||||||||||||
seq2  CAGC--AATACCTGATGACTG-AGGAGATAATTTACTCTGGGTGATTATG  841

seq1  A-TAATTTTGTCT  861
      | || ||||||||
seq2  ATTATTTTTGTCT  854


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