BAC Information

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BAC

Clone NameB6Ng01-243B11
Chromosome14 (Build37)
Map Location 103,075,784 - 103,223,173
singlet/doubletdoublet
Overlap genenone
Upstream geneUchl3, Lmo7, LOC100043795, LOC545567, LOC669278
Downstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel, LOC100043448, Slain1, Ednrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243B11.bB6Ng01-243B11.g
ACCGA052569GA052570
length1,0701,003
definitionB6Ng01-243B11.b B6Ng01-243B11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,075,784 - 103,076,873)(103,222,162 - 103,223,173)
sequence
gaattccctatttccatcactgcagagaatgaaagcctgccttggtgttg
tttttaattccctgcaagtccttccacaatgcaaatgtcacgttgaaaaa
tctggcacttgctttaaggaaaggtaagttgcccagatccccggaaaatg
ttttgacattttggtgacccttgcattctgttttataatagacgctccaa
ttaagctcagggctttcatcgtatttactacactggccctgggaacgaag
gctggcaaaccctgtgctgtccttgctctgagagcagaaccaagtattct
ccaagaaggagcagggactctcagccacctcccaagatgacagagtcaga
aaaaaactgctgtcaagaggcttacagttttcccatagcacagcctttta
ttttttctcttttcttttcttttttttttttttttacctggatgaatccc
aacacagatgttcactctggctatcagtacacagggaagagctgaataca
gaaaagttctggtccttcgattctgagtcctaggtaaaccccaagcctct
tcgcccttcgaacctgctttctctgttgaggggctgaagtcaacgatgct
cggggtctcttcaacctttttgtttcgggttgtgcacgtctattgtttac
gggcaggaagcagaaggcagacaagtgcctgtttcacaatgtgatttttg
cagcatagtcaactgccttctgtttccagtggaacttcaagtgtgaggac
aaggacagaatcgctctgacgtttgaggggcagatctccttttacttagt
tccagagaccttggcaggctccaggtgccccagtgacatgtatattttgt
ttacgaatttgcttcaaatgatactgaactaactaagaaagtctggtccc
ctctttaagttagtccggaatcttactttgagctgccgtcatcatcaagt
agcttagagaaagcgccatgtggtcaacaacgtgtgtgtcttgtgacttc
aagtaccagcagtcatttgtctctgtcctccagtttctcttatgtcctct
atctctttagtctgtgcctt
gaattctatagcaaatgacaagacaccaaggcgctagagagctttcaaag
acagtagaaaggatgacgtcagatatatgagacaataaacgttgttccca
gtaaataatagcaagagtagcatcagtctgaggcatagctgacagctgct
gggattatgtcctttcagacatagcatgggcagcagcctgtgctagtttg
tgactctggtagtttttgtgatcattactaaccaggcaatcatggagaag
atgctttcttcttagaaccttctggctttatttatgtttttgtgttctga
gttaaggttcagacactagtgtcagcaaatactttattttaaacctattc
cacagctgaagagttttctctaccctatacccattttctgtatgtgcaga
atgtggtccaccagacaggactgctagtcggtgttcaccaggctctagaa
atagacattttataagtttcttatagagtgctgtccaggtagatgggatg
ggccatggtgaggcagggatggactatttattcaacactgttatattctt
aaccccattctacagaaccaattggatgagaaagttggtcacatacaagg
cagattggacagtgactctcaagatcttgtcagcttctctctcctggttt
tggagcttggccttcatatctcggagcacctacagctctctggtgaaagg
atggaggttgggctgcagagaagcagccttttcctctccacctctttgga
cttagcttccaactcctgaagcacagagctcacacccagagatgtgtgcc
ttttctagtcaagaattcaagaattctttgggttctttctgtgtggctca
gtctcctatgcctgtgctggtgctttcatgggtctccaccatcattcatc
cacatgtcatgacaccctagcatcaattgcaacagtagttatgacatcac
cctgatctcttgaactcgtcttcaagttgctcttacctgcgtgacgccta
caa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103075784_103076873
seq2: B6Ng01-243B11.b_47_1116

seq1  GAATTCCCTATTTCCATCACTGCAGAGAATGAAAGCCTGCCTTGGTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATTTCCATCACTGCAGAGAATGAAAGCCTGCCTTGGTGTTG  50

seq1  TTTTTAATTCCCTGCAAGTCCTTCCACAATGCAAATGTCACGTTGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTCCCTGCAAGTCCTTCCACAATGCAAATGTCACGTTGAAAAA  100

seq1  TCTGGCACTTGCTTTAAGGAAAGGTAAGTTGCCCAGATCCCCGGAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACTTGCTTTAAGGAAAGGTAAGTTGCCCAGATCCCCGGAAAATG  150

seq1  TTTTGACATTTTGGTGACCCTTGCATTCTGTTTTATAATAGACGCTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATTTTGGTGACCCTTGCATTCTGTTTTATAATAGACGCTCCAA  200

seq1  TTAAGCTCAGGGCTTTCATCGTATTTACTACACTGGCCCTGGGAACGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCAGGGCTTTCATCGTATTTACTACACTGGCCCTGGGAACGAAG  250

seq1  GCTGGCAAACCCTGTGCTGTCCTTGCTCTGAGAGCAGAACCAAGTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAACCCTGTGCTGTCCTTGCTCTGAGAGCAGAACCAAGTATTCT  300

seq1  CCAAGAAGGAGCAGGGACTCTCAGCCACCTCCCAAGATGACAGAGTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGGAGCAGGGACTCTCAGCCACCTCCCAAGATGACAGAGTCAGA  350

seq1  AAAAAACTGCTGTCAAGAGGCTTACAGTTTTCCCATAGCACAGCCTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTGCTGTCAAGAGGCTTACAGTTTTCCCATAGCACAGCCTTTTA  400

seq1  TTTTTTCTCTTTTCTTTTCTTTTTTTTTTTTTTTTACCTGGATGAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCTTTTCTTTTCTTTTTTTTTTTTTTTTACCTGGATGAATCCC  450

seq1  AACACAGATGTTCACTCTGGCTATCAGTACACAGGGAAGAGCTGAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGATGTTCACTCTGGCTATCAGTACACAGGGAAGAGCTGAATACA  500

seq1  GAAAAGTTCTGGTCCTTCGATTCTGAGTCCTAGGTAAACCCCAAGCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTCTGGTCCTTCGATTCTGAGTCCTAGGTAAACCCCAAGCCTCT  550

seq1  TCGCCCTTCGAACCTGCTTTCTCTGTTGAGGGGCTGAAGTCAACGATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTTCGAACCTGCTTTCTCTGTTGAGGGGCTGAAGTCAACGATGCT  600

seq1  CGGGGTCTCTTCAACCTTTTTGTTTCGGGTTGTGCACGTCTATTGTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTCTCTTCAACCTTTTTGTTTCGGGTTGTGCACGTCTATTGTTTAC  650

seq1  GGGCAGGAAGCAGAAGGCAGACAAGTGCCTGTTTCACAATGTGATTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGAAGCAGAAGGCAGACAAGTGCCTGTTTCACAATGTGATTTTTG  700

seq1  CAGCATAGTCAACTGCCTTCTGTTTCCAGTGGAACTTCAAGTGTGAGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAGTCAACTGCCTTCTGTTTCCAGTGGAACTTCAAGTGTGAGGAC  750

seq1  AAGGACAGAATCGCTCTGACGTTTGAGGGGCAGATCTCCTTTTACTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGAATCGCTCTGACGTTTGAGGGGCAGATCTCCTTTTACTTAGT  800

seq1  TCCAGAGACCTTGGCAGGCTCCAGGTGCCCCAGTGACATGTATATTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGACCTTGGCAGGCTCCAGGTGCCCCAGTGACATGTATATTTTGT  850

seq1  TTACGAATTTGCTTCAAATGATACTGAACTAACTAAGAAAGTCTGGTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAATTTGCTTCAAATGATACTGAACTAACTAAGAAAGTCTGGTCCC  900

seq1  CTCTTTTAAGTTAGTCCGGAATCTTACTTTGAGCTGCCCGTCATCATCAA  950
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTC-TTTAAGTTAGTCCGGAATCTTACTTTGAGCTG-CCGTCATCATCAA  948

seq1  GGTAGCTTAAGAGAAAGCGCCAATGTGGTCAAACAAACGTGTGTGGTCTT  1000
       ||||||| |||||||||||| ||||||||||   ||||||||| |||||
seq2  -GTAGCTT-AGAGAAAGCGCC-ATGTGGTCAA--CAACGTGTGT-GTCTT  992

seq1  GTGAACCTTTCAAGTACCCAAGCAGTCCATTTTGTCTCTGTTCTTCCCAG  1050
      ||||    ||||||||||  |||||||   ||||||||||| ||  ||||
seq2  GTGA---CTTCAAGTACC--AGCAGTC--ATTTGTCTCTGTCCT--CCAG  1033

seq1  TTTCTCTTATGTCTTCTAATCTCCTTTAGTCTTGTGCCTT  1090
      ||||||||||||| ||| |||| |||||||| ||||||||
seq2  TTTCTCTTATGTCCTCT-ATCT-CTTTAGTC-TGTGCCTT  1070

seq1: chr14_103222162_103223173
seq2: B6Ng01-243B11.g_69_1071 (reverse)

seq1  TTGTAGGCAGACAACGCAAGGTAAGAGCACCCTGTGAAGACGAGT--CAG  48
      |||||||| | | |||| ||||||||||| |   |||||||||||   ||
seq2  TTGTAGGC-GTC-ACGC-AGGTAAGAGCAAC--TTGAAGACGAGTTCAAG  45

seq1  AGATCAGGGTGATGTCATTACTTACTGTTGCAATGGTTGCTAGGGTGTCA  98
      |||||||||||||||||| || |||||||||||| | |||||||||||||
seq2  AGATCAGGGTGATGTCATAAC-TACTGTTGCAATTGATGCTAGGGTGTCA  94

seq1  TGACCATGTGATGGAATGAATGGTGGAGACCCATGAAAGCACCAAGCAAC  148
      ||| ||||||   ||||| |||||||||||||||||||||||| ||| ||
seq2  TGA-CATGTGGATGAATG-ATGGTGGAGACCCATGAAAGCACC-AGC-AC  140

seq1  AGGCATAGGAGACCTGAGCCACACAGAAAGAACCCAAAGAATTCTTGAAT  198
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGCATAGGAGA-CTGAGCCACACAGAAAGAACCCAAAGAATTCTTGAAT  189

seq1  TCTTGACTAGAAAAGGCACACATCTCTGGGTGTGAGCTCTGTGCTTCAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACTAGAAAAGGCACACATCTCTGGGTGTGAGCTCTGTGCTTCAGG  239

seq1  AGTTGGAAGCTAAGTCCAAAGAGGTGGAGAGGAAAAGGCTGCTTCTCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAAGCTAAGTCCAAAGAGGTGGAGAGGAAAAGGCTGCTTCTCTGC  289

seq1  AGCCCAACCTCCATCCTTTCACCAGAGAGCTGTAGGTGCTCCGAGATATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAACCTCCATCCTTTCACCAGAGAGCTGTAGGTGCTCCGAGATATG  339

seq1  AAGGCCAAGCTCCAAAACCAGGAGAGAGAAGCTGACAAGATCTTGAGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAGCTCCAAAACCAGGAGAGAGAAGCTGACAAGATCTTGAGAGT  389

seq1  CACTGTCCAATCTGCCTTGTATGTGACCAACTTTCTCATCCAATTGGTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCCAATCTGCCTTGTATGTGACCAACTTTCTCATCCAATTGGTTC  439

seq1  TGTAGAATGGGGTTAAGAATATAACAGTGTTGAATAAATAGTCCATCCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATGGGGTTAAGAATATAACAGTGTTGAATAAATAGTCCATCCCT  489

seq1  GCCTCACCATGGCCCATCCCATCTACCTGGACAGCACTCTATAAGAAACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACCATGGCCCATCCCATCTACCTGGACAGCACTCTATAAGAAACT  539

seq1  TATAAAATGTCTATTTCTAGAGCCTGGTGAACACCGACTAGCAGTCCTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGTCTATTTCTAGAGCCTGGTGAACACCGACTAGCAGTCCTGT  589

seq1  CTGGTGGACCACATTCTGCACATACAGAAAATGGGTATAGGGTAGAGAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGACCACATTCTGCACATACAGAAAATGGGTATAGGGTAGAGAAA  639

seq1  ACTCTTCAGCTGTGGAATAGGTTTAAAATAAAGTATTTGCTGACACTAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCAGCTGTGGAATAGGTTTAAAATAAAGTATTTGCTGACACTAGT  689

seq1  GTCTGAACCTTAACTCAGAACACAAAAACATAAATAAAGCCAGAAGGTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAACCTTAACTCAGAACACAAAAACATAAATAAAGCCAGAAGGTTC  739

seq1  TAAGAAGAAAGCATCTTCTCCATGATTGCCTGGTTAGTAATGATCACAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAAAGCATCTTCTCCATGATTGCCTGGTTAGTAATGATCACAAA  789

seq1  AACTACCAGAGTCACAAACTAGCACAGGCTGCTGCCCATGCTATGTCTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACCAGAGTCACAAACTAGCACAGGCTGCTGCCCATGCTATGTCTGA  839

seq1  AAGGACATAATCCCAGCAGCTGTCAGCTATGCCTCAGACTGATGCTACTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATAATCCCAGCAGCTGTCAGCTATGCCTCAGACTGATGCTACTC  889

seq1  TTGCTATTATTTACTGGGAACAACGTTTATTGTCTCATATATCTGACGTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTATTTACTGGGAACAACGTTTATTGTCTCATATATCTGACGTC  939

seq1  ATCCTTTCTACTGTCTTTGAAAGCTCTCTAGCGCCTTGGTGTCTTGTCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCTACTGTCTTTGAAAGCTCTCTAGCGCCTTGGTGTCTTGTCAT  989

seq1  TTGCTATAGAATTC  1012
      ||||||||||||||
seq2  TTGCTATAGAATTC  1003