BAC Information

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BAC

Clone NameB6Ng01-244F12
Chromosome14 (Build37)
Map Location 11,953,097 - 12,047,912
singlet/doubletdoublet
Overlap geneFhit, LOC667030
Upstream geneLOC100041974
Downstream geneEG382843, LOC100042427, LOC667059, LOC100041996, Ptprg, LOC100042441
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244F12.bB6Ng01-244F12.g
ACCGA053502GA053503
length308810
definitionB6Ng01-244F12.b B6Ng01-244F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,047,604 - 12,047,912)(11,953,097 - 11,953,926)
sequence
gaattctgggaactggtgagtggctcatttgaaatagtgagcccaggaac
agagaaggaccatgtctccacccaaatagaaataaggtaaaaaatgaaag
acggcatctgaagtcaacctctggaagggaagtagggatagatggaagaa
tgtagggatggagagaagcatgaagcatggaagaagagagggagggagag
aggaaggggtaaaggaaagcatacaaggaagtagggaaggaagaaagagt
gcaggtaaattgagaaagatttcaacaaagattattttaaaaaggaaatg
gaaaaaca
gaattcaatgatgaccttgagcatgcaacacaagcacgctcttgatttcc
atatcagacctactgattagcataacaaccagagtgagagtgttcatcac
aactgtcctgattaaggctactatctctacagagatctgatagtagttgt
gtctggacaaactacttgatttaagccttacttccatttcaataaaatgg
aaacatctgtctgatgcgcctactgccatcttcttcacatggtattagta
gacactggggaaaatagtatttgaaaccacatattaattatagagtacat
caaaatttacatactaaaagaaataactaggctataccttctggctcaat
gtggaaacaattacatcattgtaataatgtgataattacctgtaggttta
ggctatattacatgatatgactatattagaaggttgtgggaaatagaaga
ggtaggaataggaaatgttagagtcaggacaattgcccagagtcacaaag
cttacaagctgcagaagcaaccttgaaggcattctttcttcctaacattt
tagctgaagctctccccagcatacagtgcaaccatgttacttagacacat
aggagagggatcaaatgtaatgtctctaggacagccattaaacaccttgt
tctaggacctgcacagaacaggagtcaatacagaaggcataaaaggaaat
ttgcttgttccattctcagcatattgaccatacacagctaaaaaggccca
tttccctgatatccggacctgtttttggtttaatttgggttggtttggtt
tggggttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12047604_12047912
seq2: B6Ng01-244F12.b_43_350 (reverse)

seq1  TGTTTTTCCATTTCCTTTTTAAAATAATCTTGTTTTGTTTTCTTTCTCCT  50
      ||||||||||||||||||||||||||||||| | |||   ||||||||  
seq2  TGTTTTTCCATTTCCTTTTTAAAATAATCTT-TGTTGAAATCTTTCTCAA  49

seq1  TTTACCTGCACTCTTTCTTCCTTCCCTACTTCCTTCTCTGCTTTCCTTTA  100
      ||||||||||||||||||||||||||||||||||| | ||||||||||||
seq2  TTTACCTGCACTCTTTCTTCCTTCCCTACTTCCTTGTATGCTTTCCTTTA  99

seq1  CCCCTTCCTCTCTCCCTCCCTCTCTTCTTCCATGCTTCATGCTTCTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCTCTCTCCCTCCCTCTCTTCTTCCATGCTTCATGCTTCTCTCC  149

seq1  ATCCCTACATTCTTCCATCTATCCCTACTTCCCTTCCAGAGGTTGACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTACATTCTTCCATCTATCCCTACTTCCCTTCCAGAGGTTGACTTC  199

seq1  AGATGCCGTCTTTCATTTTTTACCTTATTTCTATTTGGGTGGAGACATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCGTCTTTCATTTTTTACCTTATTTCTATTTGGGTGGAGACATGG  249

seq1  TCCTTCTCTGTTCCTGGGCTCACTATTTCAAATGAGCCACTCACCAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCTGTTCCTGGGCTCACTATTTCAAATGAGCCACTCACCAGTTC  299

seq1  CCAGAATTC  309
      |||||||||
seq2  CCAGAATTC  308

seq1: chr14_11953097_11953926
seq2: B6Ng01-244F12.g_67_876

seq1  GAATTCAATGATGACCTTGAGCATGCAACACAAGCACGCTCTTGATTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGATGACCTTGAGCATGCAACACAAGCACGCTCTTGATTTCC  50

seq1  ATATCAGACCTACTGATTAGCATAACAACCAGAGTGAGAGTGTTCATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGACCTACTGATTAGCATAACAACCAGAGTGAGAGTGTTCATCAC  100

seq1  AACTGTCCTGATTAAGGCTACTATCTCTACAGAGATCTGATAGTAGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCCTGATTAAGGCTACTATCTCTACAGAGATCTGATAGTAGTTGT  150

seq1  GTCTGGACAAACTACTTGATTTAAGCCTTACTTCCATTTCAATAAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGACAAACTACTTGATTTAAGCCTTACTTCCATTTCAATAAAATGG  200

seq1  AAACATCTGTCTGATGCGCCTACTGCCATCTTCTTCACATGGTATTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTGTCTGATGCGCCTACTGCCATCTTCTTCACATGGTATTAGTA  250

seq1  GACACTGGGGAAAATAGTATTTGAAACCACATATTAATTATAGAGTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGGGAAAATAGTATTTGAAACCACATATTAATTATAGAGTACAT  300

seq1  CAAAATTTACATACTAAAAGAAATAACTAGGCTATACCTTCTGGCTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTACATACTAAAAGAAATAACTAGGCTATACCTTCTGGCTCAAT  350

seq1  GTGGAAACAATTACATCATTGTAATAATGTGATAATTACCTGTAGGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAACAATTACATCATTGTAATAATGTGATAATTACCTGTAGGTTTA  400

seq1  GGCTATATTACATGATATGACTATATTAGAAGGTTGTGGGAAATAGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATATTACATGATATGACTATATTAGAAGGTTGTGGGAAATAGAAGA  450

seq1  GGTAGGAATAGGAAATGTTAGAGTCAGGACAATTGCCCAGAGTCACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAATAGGAAATGTTAGAGTCAGGACAATTGCCCAGAGTCACAAAG  500

seq1  CTTACAAGCTGCAGAAGCAACCTTGAAGGCATTCTTTCTTCCTAACATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAGCTGCAGAAGCAACCTTGAAGGCATTCTTTCTTCCTAACATTT  550

seq1  TAGCTGAAGCTCTCCCCAGCATACAGTGCAACCATGTTACTTAGACACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAGCTCTCCCCAGCATACAGTGCAACCATGTTACTTAGACACAT  600

seq1  AGGAGAGGGATCAAATGTAATGTCTCTAGGACAGCCATTAAACACCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGGATCAAATGTAATGTCTCTAGGACAGCCATTAAACACCTTGT  650

seq1  TCTAGGACCTGCACAGAACAGGAGTCAATACAGAAGGCATAAAAGGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACCTGCACAGAACAGGAGTCAATACAGAAGGCATAAAAGGAAAT  700

seq1  TTGCTTGTTCCATTCTCAGCATATTGACCATACACAGCTAAAAAGGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGTTCCATTCTCAGCATATTGACCATACACAGCTAAAAAGGCCCA  750

seq1  TTTCCCTGATATCCGGACCTGTTTTTGGTTTAATTTGGGTTGGTTTGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGATATCCGGACCTGTTTTTGGTTTAATTTGGGTTGGTTTGGTT  800

seq1  T-GGGTTTTGTTATTGTTGTTGTTTGTTTTG  830
      | ||||||||                     
seq2  TGGGGTTTTG---------------------  810