BAC Information

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BAC

Clone NameB6Ng01-245C08
Chromosome14 (Build37)
Map Location 7,189,298 - 7,337,273
singlet/doubletdoublet
Overlap geneEG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964
Upstream geneEG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000
Downstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245C08.bB6Ng01-245C08.g
ACCGA054106GA054107
length2881,136
definitionB6Ng01-245C08.b B6Ng01-245C08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,336,986 - 7,337,273)(7,189,298 - 7,190,416)
sequence
caggtgagtgacactgcaccttgtttctatgcaatactgggaactaaatc
cagagcttcatgcatgctagcaaagcagtctaccagtgagctgcctcccc
agcccaaactgttctgcactgttcactgcctgccaaacaggggcatgacc
ccggggatcttcaatgggaactaaagtgagtgggcttgttccaatgataa
tattcacattgcaagtatttaataactatgcagtcattcatggaaagata
tttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctttgtttagttttgagacccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatgttggatattagtcccc
tgtctgatttaggataggtaaagattcttttccaatctgttggtggcctt
tttgtcttattgagagcctgccgttctttattacaccttggtggtacaca
cctctgcttactagaatctttaggaaattaagtgataggactaatataat
gacattgacaaggtacaccatctggcagtcacaggaaactcactaataca
ggactcatgcaggcaatttcaactgctccaaaagcttgactggtaggttg
cctttgcaatacaccagctgggtactatcctgtaaccctctatccttcta
ttctcttttgagcaaaatagagtgacaaagacaatagtagcagactagcg
ctcaagctaagatggatgctattgatagactttctctgagagataaactt
cacagaatcagctggaaactgaaggaaagagattattattattattatta
ttattattattattattattattttctttatttacatttcaaatgttgtc
ccctttcctagtttcctctctgtaaatagaggcatagaggaagaaagagt
tttatttagctggttttcaggtaataagtgtggggataggaactctccac
cttaatctctaccctgtcatccaaacactgtccctttaactatgtaagaa
aacccatgtgtagacctcaagaaatcagaaatcaggggtttgtggtgtgg
ggtacatgttatataccaatagatctttttaaatggcccaacaaacattt
gaggggaaataataaaaatgttaccattttgtggggtagtggggctgtgc
acagacagcctggtctccagtcgaacaaggtctggaaccccagagactag
atggatggtgatttccaacctacatggggacggaagggtgttccatcatg
tcctcctggcctttcctggctcctggccaaagtaccatcccccacagctc
cccaacaggaggaggtgtgtggactatcagtcaacgataggaacagcacc
aagcattcctcacaaattagaaggtacctgcctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7336986_7337273
seq2: B6Ng01-245C08.b_53_340 (reverse)

seq1  CACACACACACACACACACACACACACACACACACAAATATCTTTCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAAATATCTTTCCATG  50

seq1  AATGACTGCATAGTTATTAAATACTTGCAATGTGAATATTATCATTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGCATAGTTATTAAATACTTGCAATGTGAATATTATCATTGGAA  100

seq1  CAAGCCCACTCACTTTAGTTCCCATTGAAGATCCCCGGGGTCATGCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCACTCACTTTAGTTCCCATTGAAGATCCCCGGGGTCATGCCCCT  150

seq1  GTTTGGCAGGCAGTGAACAGTGCAGAACAGTTTGGGCTGGGGAGGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCAGGCAGTGAACAGTGCAGAACAGTTTGGGCTGGGGAGGCAGCT  200

seq1  CACTGGTAGACTGCTTTGCTAGCATGCATGAAGCTCTGGATTTAGTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTAGACTGCTTTGCTAGCATGCATGAAGCTCTGGATTTAGTTCCC  250

seq1  AGTATTGCATAGAAACAAGGTGCAGTGTCACTCACCTG  288
      ||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGCATAGAAACAAGGTGCAGTGTCACTCACCTG  288

seq1: chr14_7189298_7190416
seq2: B6Ng01-245C08.g_66_1201

seq1  GAATTCTTTGTTTAGTTTTGAGACCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGTTTTGAGACCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGGAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC  100

seq1  TGTCTGATTTAGGATAGGTAAAGATTCTTTTCCAATCTGTTGGTGGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATTTAGGATAGGTAAAGATTCTTTTCCAATCTGTTGGTGGCCTT  150

seq1  TTTGTCTTATTGAGAGCCTGCCGTTCTTTATTACACCTTGGTGGTACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTGAGAGCCTGCCGTTCTTTATTACACCTTGGTGGTACACA  200

seq1  CCTCTGCTTACTAGAATCTTTAGGAAATTAAGTGATAGGACTAATATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTTACTAGAATCTTTAGGAAATTAAGTGATAGGACTAATATAAT  250

seq1  GACATTGACAAGGTACACCATCTGGCAGTCACAGGAAACTCACTAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGACAAGGTACACCATCTGGCAGTCACAGGAAACTCACTAATACA  300

seq1  GGACTCATGCAGGCAATTTCAACTGCTCCAAAAGCTTGACTGGTAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCATGCAGGCAATTTCAACTGCTCCAAAAGCTTGACTGGTAGGTTG  350

seq1  CCTTTGCAATACACCAGCTGGGTACTATCCTGTAACCCTCTATCCTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAATACACCAGCTGGGTACTATCCTGTAACCCTCTATCCTTCTA  400

seq1  TTCTCTTTTGAGCAAAATAGAGTGACAAAGACAATAGTAGCAGACTAGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTGAGCAAAATAGAGTGACAAAGACAATAGTAGCAGACTAGCG  450

seq1  CTCAAGCTAAGATGGATGCTATTGATAGACTTTCTCTGAGAGATAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTAAGATGGATGCTATTGATAGACTTTCTCTGAGAGATAAACTT  500

seq1  CACAGAATCAGCTGGAAACTGAAGGAAAGAGATTATTATTATTATTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATCAGCTGGAAACTGAAGGAAAGAGATTATTATTATTATTATTA  550

seq1  TTATTATTATTATTATTATTATTTTCTTTATTTACATTTCAAATGTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTATTATTATTTTCTTTATTTACATTTCAAATGTTGTC  600

seq1  CCCTTTCCTAGTTTCCTCTCTGTAAATAGAGGCATAGAGGAAGAAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCTAGTTTCCTCTCTGTAAATAGAGGCATAGAGGAAGAAAGAGT  650

seq1  TTTATTTAGCTGGTTTTCAGGTAATAAGTGTGGGGATAGGAACTCTCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGCTGGTTTTCAGGTAATAAGTGTGGGGATAGGAACTCTCCAC  700

seq1  CTTAATCTCTACCCTGTCATCCAAACACTGTCCCTTTAACTATGTAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCTCTACCCTGTCATCCAAACACTGTCCCTTTAACTATGTAAGAA  750

seq1  AACCCATGTGTAGACCTCAAGAAATCAGAAATCAGGGGTTTGTGGTGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATGTGTAGACCTCAAGAAATCAGAAATCAGGGGTTTGTGGTGTGG  800

seq1  GGTACATGTTATATACCAATAGATCTTTTTAAATGGCCCAACAAACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATGTTATATACCAATAGATCTTTTTAAATGGCCCAACAAACATTT  850

seq1  GA-GGGAAATAATAAAAATGTTACCATTTTGTGGGGTAGT-GGGCTGTGC  898
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGGGGAAATAATAAAAATGTTACCATTTTGTGGGGTAGTGGGGCTGTGC  900

seq1  ACAGACAGCCTGGTCTCCAGTCGAACAAAGGTCTGGAACCCCAGAGACTA  948
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACAGACAGCCTGGTCTCCAGTCGAAC-AAGGTCTGGAACCCCAGAGACTA  949

seq1  GATGGATGGTGATTTCC-ACCTACAT-GGGACGGAA-GGTGTTCCATCAT  995
      ||||||||||||||||| |||||||| ||||||||| |||||||||||||
seq2  GATGGATGGTGATTTCCAACCTACATGGGGACGGAAGGGTGTTCCATCAT  999

seq1  GT-CTCCTGGCCTT--CTGGCTCCTGTCAAAGTTACCAT-CCCCACAG--  1039
      || |||||||||||  |||||||||| | ||  |||||| ||||||||  
seq2  GTCCTCCTGGCCTTTCCTGGCTCCTGGCCAAAGTACCATCCCCCACAGCT  1049

seq1  CCCCCACAGGA-GAGGTGTGTGG-CTATCAGTC-ACG-TAGGAGCAGCAC  1085
      |||| |||||| ||||||||||| ||||||||| ||| ||||| ||||||
seq2  CCCCAACAGGAGGAGGTGTGTGGACTATCAGTCAACGATAGGAACAGCAC  1099

seq1  CAAGCCTTCC-CACAAATGAG-AGGTACCTG-CTGTC  1119
      ||||| |||| ||||||| || ||||||||| |||||
seq2  CAAGCATTCCTCACAAATTAGAAGGTACCTGCCTGTC  1136