BAC Information

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BAC

Clone NameB6Ng01-245E01
Chromosome14 (Build37)
Map Location 36,985,632 - 36,986,709
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245E01.bB6Ng01-245E01.g
ACCGA054185GA054186
length1,0711,168
definitionB6Ng01-245E01.b B6Ng01-245E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaataacaaagggccaggatatggctggaaggggaggcttca
gagatcggggagaacctaggtatcacacgcctggttactagaggtttgaa
tttgtcctcatcgagactaaaaattattgggaaagtagtttatctccaaa
aagaggcttttgtaggttaccatgcaaagagcaagctgactgaactgttt
ggaaaacaaagctaggagatgacagcatggtttatgtaggatggcaggag
tcttacatagacaacaagcagttgggtgttgagtacatcctgaaaatgta
tgaatgtagacaagaagaatgacggagagaagcaaccaaggaagggaagt
gctaggacccttgcccaggataattgctacaatggggcaaccaataacag
gaggcagttatgcctgaaacaggaagagagagggcattagctactacaac
aatgtgttggtgattggtcagacctttactctgcctgcctcccctctcct
tgggatactctgatgaaaagttattcatcattccaactccagtctgagtt
cctgagatttcatccacaattccaattcagccacagttcatttatgactg
ggtccattgccagtggtctgtccctcctattacttcctctcagcataggt
caagcttcattggctcagtttttcctttcaagcatttgcctgactcatcc
atttctctctgattcctttaggcctgtgcttacctttgaggtgaatgcta
cagagaacaaaagctaccatgaaaattgaaacaagggttctacaaaactt
acctcttgttctggattcctccagtaattacaacatgttgcagttttagg
ggattcctgagtgttcaagtgagtatctttatgtgtctgtatctgtttct
tgtgcttttcttggactcttttcctcctctctgttaattttgtcctattt
tgtgtgctgtattgttttacctattttattatatccctttagagcctgct
tctttctatgagaaacagaaagcagtagttcctgatgggagggatacagg
gaggaactggtgagggataga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggcaaaatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagagaaacactcctccattgttggtgg
gattgcaggcttgtacaaccactctggaaatccgtctggcagttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgcccaaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tcgatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccaaaacct
aggatacccaagatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacactgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggaggagctagagaaagtacccaagagctaaaggatctgcaacctatagg
tggatcacattatgactaaccagtactccgagctctgacctctagctgca
tatgtatcaaagatggctagtcgccatcacctgggtaagaagtccatgga
acacgccaactttaattgccagtacaggaacgctagctaaagggtaagtg
gcggtaataggaagtgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36985632_36986709
seq2: B6Ng01-245E01.b_43_1113 (reverse)

seq1  TCTATCCCTCA-CAGTTCCTCCCTGTATCCCCTCCCATCAGGAACTACTG  49
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  TCTATCCCTCACCAGTTCCTCCCTGTAT-CCCTCCCATCAGGAACTACTG  49

seq1  CCTTTCTGTTTCTCATTAGGAAAGAAGCAGGCTTCTAAAGGATAATAATA  99
       |||||||||||||||   ||||||||||||| ||||||||   ||||||
seq2  -CTTTCTGTTTCTCAT--AGAAAGAAGCAGGC-TCTAAAGGGATATAATA  95

seq1  AAATAGGTAAAACAATAACAAGCACAACAAAATAGGACAAAATTAACAGA  149
      |||||||||||||||||   ||||| ||||||||||||||||||||||||
seq2  AAATAGGTAAAACAATA--CAGCAC-ACAAAATAGGACAAAATTAACAGA  142

seq1  GAGGAGGAAAAGAGTCCAAGAAAAGCACAAGAAACAGATACAGACACATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAAAAGAGTCCAAGAAAAGCACAAGAAACAGATACAGACACATA  192

seq1  AAGATACTCACTTGAACACTCAGGAATCCCCTAAAACTGCAACATGTTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACTCACTTGAACACTCAGGAATCCCCTAAAACTGCAACATGTTGT  242

seq1  AATTACTGGAGGAATCCAGAACAAGAGGTAAGTTTTGTAGAACCCTTGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTGGAGGAATCCAGAACAAGAGGTAAGTTTTGTAGAACCCTTGTT  292

seq1  TCAATTTTCATGGTAGCTTTTGTTCTCTGTAGCATTCACCTCAAAGGTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTCATGGTAGCTTTTGTTCTCTGTAGCATTCACCTCAAAGGTAA  342

seq1  GCACAGGCCTAAAGGAATCAGAGAGAAATGGATGAGTCAGGCAAATGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGCCTAAAGGAATCAGAGAGAAATGGATGAGTCAGGCAAATGCTT  392

seq1  GAAAGGAAAAACTGAGCCAATGAAGCTTGACCTATGCTGAGAGGAAGTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAAAACTGAGCCAATGAAGCTTGACCTATGCTGAGAGGAAGTAA  442

seq1  TAGGAGGGACAGACCACTGGCAATGGACCCAGTCATAAATGAACTGTGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGGACAGACCACTGGCAATGGACCCAGTCATAAATGAACTGTGGC  492

seq1  TGAATTGGAATTGTGGATGAAATCTCAGGAACTCAGACTGGAGTTGGAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGGAATTGTGGATGAAATCTCAGGAACTCAGACTGGAGTTGGAAT  542

seq1  GATGAATAACTTTTCATCAGAGTATCCCAAGGAGAGGGGAGGCAGGCAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAACTTTTCATCAGAGTATCCCAAGGAGAGGGGAGGCAGGCAGA  592

seq1  GTAAAGGTCTGACCAATCACCAACACATTGTTGTAGTAGCTAATGCCCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGTCTGACCAATCACCAACACATTGTTGTAGTAGCTAATGCCCTC  642

seq1  TCTCTTCCTGTTTCAGGCATAACTGCCTCCTGTTATTGGTTGCCCCATTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTGTTTCAGGCATAACTGCCTCCTGTTATTGGTTGCCCCATTG  692

seq1  TAGCAATTATCCTGGGCAAGGGTCCTAGCACTTCCCTTCCTTGGTTGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATTATCCTGGGCAAGGGTCCTAGCACTTCCCTTCCTTGGTTGCTT  742

seq1  CTCTCCGTCATTCTTCTTGTCTACATTCATACATTTTCAGGATGTACTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGTCATTCTTCTTGTCTACATTCATACATTTTCAGGATGTACTCA  792

seq1  ACACCCAACTGCTTGTTGTCTATGTAAGACTCCTGCCATCCTACATAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCAACTGCTTGTTGTCTATGTAAGACTCCTGCCATCCTACATAAAC  842

seq1  CATGCTGTCATCTCCTAGCTTTGTTTTCCAAACAGTTCAGTCAGCTTGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTCATCTCCTAGCTTTGTTTTCCAAACAGTTCAGTCAGCTTGCT  892

seq1  CTTTGCATGGTAACCTACAAAAGCCTCTTTTTGGAGATAAACTACTTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCATGGTAACCTACAAAAGCCTCTTTTTGGAGATAAACTACTTTCC  942

seq1  CAATAATTTTTAGTCTCGATGAGGACAAATTCAAACCTCTAGTAACCAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTTTTAGTCTCGATGAGGACAAATTCAAACCTCTAGTAACCAGG  992

seq1  CGTGTGATACCTAGGTTCTCCCCGATCTCTGAAGCCTCCCCTTCCAGCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGATACCTAGGTTCTCCCCGATCTCTGAAGCCTCCCCTTCCAGCCA  1042

seq1  TATCCTGGCCCTTTGTTATTTCTGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  TATCCTGGCCCTTTGTTATTTCTGAATTC  1071