BAC Information

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BAC

Clone NameB6Ng01-245G13
Chromosome14 (Build37)
Map Location 9,008,718 - 9,172,247
singlet/doubletdoublet
Overlap geneKctd6, Acox2, BC055107
Upstream geneLOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb
Downstream geneOit1, LOC667005, 4930452B06Rik, LOC100041948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245G13.bB6Ng01-245G13.g
ACCGA054301GA054302
length1,0281,082
definitionB6Ng01-245G13.b B6Ng01-245G13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,171,213 - 9,172,247)(9,008,718 - 9,009,810)
sequence
gaattcactccaataccctccagccctggtttaaaaaaaaaaaaaaaaaa
gcaaagcaaagaaactcctactatcctccaggactagatggctacctttc
tgggccttccccctggaggtcacagagaatggtcaggccattggcctcgt
tgctgttcccaaatggactccatgcggagggcttcttgtccaaaatttac
caagatcctcagtggaggatcagtcaactggccacccacccttgccatgg
acgcagcagggcctgtgcagctctgcaggtgacatacccagagagaaagc
tagctgagtgccagccaggaagacatcacatttgagaaccaggccctagg
ctagggagtgagcaggacccttcagactctggactttgccatctatccca
ggatgctctgccactacatctgctcagtctctggatctggcggcccctag
atgtttttctccttggcctgagcacactagtcaacgttttattgtctctt
cactgcaagcgatcttcccatcatgttaactcccaccttcagaatggccc
taaactctaactcagaaaacataaatgttccttagggaagcctggggtca
gaggcaagtggctcttgcagtcactaaaaggctcatttgaaagcagacgg
gagataagaaaactgaacagtttgctctcaaggcttctcagtggggcttt
tcttatcttctgtccctacctttctccaacctggagtcacaagttgaaat
tcccaagcctgcttcaaacgaagtaaaggttgggcactgtgtaagacatc
cagttgatggctcacatgctggttttggaaatccagctgctctctgctgt
cagaggccgaggccccatgccggctttggctgttgggaggaagaaatact
gcctcataattgctcagtgctatcacacacaccttgtgatgatctatgag
accaaatttctctgatatccttatggatgccccacccagtaaactctctc
tcaaacacgcacatgcacacgtgtacac
gaattccagttacacttttggttcatttcagggacacccagtgcttacca
gcatcccccatgaagccccttgatttcagatgttagtccccatggactct
tttttttcctttgtagtagtgagtttttgtcaatttgagacaaactaaag
tcacctagaggaagagggaatcgcagttgaggatgagaatttgcccatca
gactggcctgtgggcgtgcctgtgggcgtgcctgtgggcgtgtctgtggt
gtgatttttctggactggtgtgggagggcccagcccattgtagactgtgc
catccctggactagaataggaaagcaattggagcaaaccatgaaggcaag
cccgtaagcagtgttctagtgtagctcctgcctctgctccaactttcctc
agtgatgcactgggacatggaagtataagtcaaatgaaccttttcctcgt
ccaagttggttttggtcatcatttttatcacaggaacagaaaacaaatta
ggacagttctgttcatagtaaaatatgatttaattgtcttccgcccagca
tttgggatctgaattacaaagccaaaggagacatcaagatgaataaaacc
tagagcctagatgtgttcttgggccttatatttacaaaaaaaattgtcag
tgactcccccaagtcagttgagttagttggggaaggcattgggtttcatg
ggcctcagagagttttcttttaaataacaatctggtcatttagatacaaa
ttaattggtagagttgctttcctttcaaaccggccgatttagaaagactg
agcaaaatttcctattttaaaaacacaaacaaaaatactgaactttaaag
tcataagttctgaaaaggaactttatacgctcaccagattatatagaaag
gctctgagaagcagaattggccaaatcacgtctttgcagagtaagagaaa
cattgggctcaaatgctggggtcttttcctctgtttgaaaatttctttat
caagttctttctctttggtttggccatacctgtgtgcagtttgataaaga
ggagcctcaatttgtacacagcccagaacttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9171213_9172247
seq2: B6Ng01-245G13.b_51_1078 (reverse)

seq1  GTGTGCACGTGTGCATGTGCGTGTGTGAGAGAGAGTTTTACTGGGGTTGG  50
      |||| ||||||||||||||||||| |||||||||| |||||||||    |
seq2  GTGTACACGTGTGCATGTGCGTGTTTGAGAGAGAG-TTTACTGGG---TG  46

seq1  GGGCATCCATAAGGATATCCAGGAGAAATTTTGGTCTCAATAGATCATCA  100
      |||||||||||||||||||   |||||| ||||||||| |||||||||||
seq2  GGGCATCCATAAGGATATC--AGAGAAA-TTTGGTCTC-ATAGATCATCA  92

seq1  CAAGGTTGTGTGTGATAGCACTGAGCAATTATGAGGCAGTATTTCTTCCT  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGG-TGTGTGTGATAGCACTGAGCAATTATGAGGCAGTATTTCTTCCT  141

seq1  -CCAACAGCCAAAGCCGGCATGGGGCCTCGGCCTCTGACAGCAGAGAGCA  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGCCAAAGCCGGCATGGGGCCTCGGCCTCTGACAGCAGAGAGCA  191

seq1  GCTGGATTTCCAAAACCAGCATGTGAGCCATCAACTGGATGTCTTACACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATTTCCAAAACCAGCATGTGAGCCATCAACTGGATGTCTTACACA  241

seq1  GTGCCCAACCTTTACTTCGTTTGAAGCAGGCTTGGGAA-TTCAACTTGTG  298
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGCCCAACCTTTACTTCGTTTGAAGCAGGCTTGGGAATTTCAACTTGTG  291

seq1  ACTCCAGGTTGGAGAAAGGTAGGGACAGAAGATAAGAAAAGCCCCACTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGGTTGGAGAAAGGTAGGGACAGAAGATAAGAAAAGCCCCACTGA  341

seq1  GAAGCCTTGAGAGCAAACTGTTCAGTTTTCTTATCTCCCGTCTGCTTTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTGAGAGCAAACTGTTCAGTTTTCTTATCTCCCGTCTGCTTTCA  391

seq1  AATGAGCCTTTTAGTGACTGCAAGAGCCACTTGCCTCTGACCCCAGGCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCCTTTTAGTGACTGCAAGAGCCACTTGCCTCTGACCCCAGGCTT  441

seq1  CCCTAAGGAACATTTATGTTTTCTGAGTTAGAGTTTAGGGCCATTCTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGGAACATTTATGTTTTCTGAGTTAGAGTTTAGGGCCATTCTGAA  491

seq1  GGTGGGAGTTAACATGATGGGAAGATCGCTTGCAGTGAAGAGACAATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGTTAACATGATGGGAAGATCGCTTGCAGTGAAGAGACAATAAA  541

seq1  ACGTTGACTAGTGTGCTCAGGCCAAGGAGAAAAACATCTAGGGGCCGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGACTAGTGTGCTCAGGCCAAGGAGAAAAACATCTAGGGGCCGCCA  591

seq1  GATCCAGAGACTGAGCAGATGTAGTGGCAGAGCATCCTGGGATAGATGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGAGACTGAGCAGATGTAGTGGCAGAGCATCCTGGGATAGATGGC  641

seq1  AAAGTCCAGAGTCTGAAGGGTCCTGCTCACTCCCTAGCCTAGGGCCTGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCAGAGTCTGAAGGGTCCTGCTCACTCCCTAGCCTAGGGCCTGGT  691

seq1  TCTCAAATGTGATGTCTTCCTGGCTGGCACTCAGCTAGCTTTCTCTCTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATGTGATGTCTTCCTGGCTGGCACTCAGCTAGCTTTCTCTCTGG  741

seq1  GTATGTCACCTGCAGAGCTGCACAGGCCCTGCTGCGTCCATGGCAAGGGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCACCTGCAGAGCTGCACAGGCCCTGCTGCGTCCATGGCAAGGGT  791

seq1  GGGTGGCCAGTTGACTGATCCTCCACTGAGGATCTTGGTAAATTTTGGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCCAGTTGACTGATCCTCCACTGAGGATCTTGGTAAATTTTGGAC  841

seq1  AAGAAGCCCTCCGCATGGAGTCCATTTGGGAACAGCAACGAGGCCAATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCCTCCGCATGGAGTCCATTTGGGAACAGCAACGAGGCCAATGG  891

seq1  CCTGACCATTCTCTGTGACCTCCAGGGGGAAGGCCCAGAAAGGTAGCCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCATTCTCTGTGACCTCCAGGGGGAAGGCCCAGAAAGGTAGCCAT  941

seq1  CTAGTCCTGGAGGATAGTAGGAGTTTCTTTGCTTTGCTTTTTTTTTTTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCTGGAGGATAGTAGGAGTTTCTTTGCTTTGCTTTTTTTTTTTTT  991

seq1  TTTTTAAACCAGGGCTGGAGGGTATTGGAGTGAATTC  1035
      |||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAACCAGGGCTGGAGGGTATTGGAGTGAATTC  1028

seq1: chr14_9008718_9009810
seq2: B6Ng01-245G13.g_67_1148

seq1  GAATTCCAGTTACACTTTTGGTTCATTTCAGGGACACCCAGTGCTTACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTACACTTTTGGTTCATTTCAGGGACACCCAGTGCTTACCA  50

seq1  GCATCCCCCATGAAGCCCCTTGATTTCAGATGTTAGTCCCCATGGACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCCCATGAAGCCCCTTGATTTCAGATGTTAGTCCCCATGGACTCT  100

seq1  TTTTTTTCCTTTGTAGTAGTGAGTTTTTGTCAATTTGAGACAAACTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCTTTGTAGTAGTGAGTTTTTGTCAATTTGAGACAAACTAAAG  150

seq1  TCACCTAGAGGAAGAGGGAATCGCAGTTGAGGATGAGAATTTGCCCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAGAGGAAGAGGGAATCGCAGTTGAGGATGAGAATTTGCCCATCA  200

seq1  GACTGGCCTGTGGGCGTGCCTGTGGGCGTGCCTGTGGGCGTGTCTGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCCTGTGGGCGTGCCTGTGGGCGTGCCTGTGGGCGTGTCTGTGGT  250

seq1  GTGATTTTTCTGGACTGGTGTGGGAGGGCCCAGCCCATTGTAGACTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTTCTGGACTGGTGTGGGAGGGCCCAGCCCATTGTAGACTGTGC  300

seq1  CATCCCTGGACTAGAATAGGAAAGCAATTGGAGCAAACCATGAAGGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGGACTAGAATAGGAAAGCAATTGGAGCAAACCATGAAGGCAAG  350

seq1  CCCGTAAGCAGTGTTCTAGTGTAGCTCCTGCCTCTGCTCCAACTTTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTAAGCAGTGTTCTAGTGTAGCTCCTGCCTCTGCTCCAACTTTCCTC  400

seq1  AGTGATGCACTGGGACATGGAAGTATAAGTCAAATGAACCTTTTCCTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGCACTGGGACATGGAAGTATAAGTCAAATGAACCTTTTCCTCGT  450

seq1  CCAAGTTGGTTTTGGTCATCATTTTTATCACAGGAACAGAAAACAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTGGTTTTGGTCATCATTTTTATCACAGGAACAGAAAACAAATTA  500

seq1  GGACAGTTCTGTTCATAGTAAAATATGATTTAATTGTCTTCCGCCCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGTTCTGTTCATAGTAAAATATGATTTAATTGTCTTCCGCCCAGCA  550

seq1  TTTGGGATCTGAATTACAAAGCCAAAGGAGACATCAAGATGAATAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGATCTGAATTACAAAGCCAAAGGAGACATCAAGATGAATAAAACC  600

seq1  TAGAGCCTAGATGTGTTCTTGGGCCTTATATTTACAAAAAAAATTGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTAGATGTGTTCTTGGGCCTTATATTTACAAAAAAAATTGTCAG  650

seq1  TGACTCCCCCAAGTCAGTTGAGTTAGTTGGGGAAGGCATTGGGTTTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCCCCAAGTCAGTTGAGTTAGTTGGGGAAGGCATTGGGTTTCATG  700

seq1  GGCCTCAGAGAGTTTTCTTTTAAATAACAATCTGGTCATTTAGATACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAGAGAGTTTTCTTTTAAATAACAATCTGGTCATTTAGATACAAA  750

seq1  TTAATTGGTAGAGTTGCTTTCCTTTCAAACCGGCCGATTTAGAAAGACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGTAGAGTTGCTTTCCTTTCAAACCGGCCGATTTAGAAAGACTG  800

seq1  AGCAAAATTTCCTATTTTAAAAACACAAACAAAAATACTGAACTTTAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATTTCCTATTTTAAAAACACAAACAAAAATACTGAACTTTAAAG  850

seq1  TCATAAGTTCTGAAAAGGAACTTTATACGCTCACCAGATTATATAGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGTTCTGAAAAGGAACTTTATACGCTCACCAGATTATATAGAAAG  900

seq1  GCTCTGAGAAGCAGAAATTGGCCAAAATCACGTCTTTGCAGAGTAAGAAG  950
      |||||||||||||| |||||||| ||||||||||||||||||||||| ||
seq2  GCTCTGAGAAGCAG-AATTGGCC-AAATCACGTCTTTGCAGAGTAAG-AG  947

seq1  AAACATTTGGCCTCAAATGCTTGGGGTCTTTT-CTCTGTTTTGAAAAATT  999
      ||||| |||| ||||||||| ||||||||||| ||||||||   ||||||
seq2  AAACA-TTGGGCTCAAATGC-TGGGGTCTTTTCCTCTGTTT--GAAAATT  993

seq1  TCTTTATCCAAGGTTCTTTCTCTATGGGTTTGGCCATACTTGTGTGCAGT  1049
      ||||||||  | ||||||||||| | ||||||||||||| ||||||||||
seq2  TCTTTATC--AAGTTCTTTCTCT-TTGGTTTGGCCATACCTGTGTGCAGT  1040

seq1  TTTGGATTAAAGAGGAGCCTCATTTTGTACACAGCCCAG-ACTTG  1093
      ||  || ||||||||||||||| |||||||||||||||| |||||
seq2  TT--GA-TAAAGAGGAGCCTCAATTTGTACACAGCCCAGAACTTG  1082