BAC Information

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BAC

Clone NameB6Ng01-246O05
Chromosome14 (Build37)
Map Location 60,298,943 - 60,299,827
singlet/doubletsinglet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246O05.g
ACCGA055378
length885
definitionB6Ng01-246O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgcttccttgctgatgagagggtttggaccctttcccttctca
cttctccaagacttttcttgtcttaaaatctcacctttagagccaggcat
ggtggtgcacgcctttaatcccagcacttggaaggcagaggcaggcggat
ttctgagttcgaggccagcctggtctacagagtaagttccaggacatcca
gggctacacagagaaaccctgtctcaaaaaacaaaaaacaaaaaaaaaaa
aaacaaaaacaaaaaaaccaacagacaaaaaaaatctcacctttaaagta
tatcttcctgtctgtctagtggtaggaagacggacatgtaccactacatt
atacaccgcagccacctttctgtggcaatgaggaacaaccagaaccttgg
gcacacaaggcaagcctctatcctagagcttcctccctaagcctcatgaa
tataagggattttttttaagtgttcctttatttctttacttgtattttat
gtgcattgatgttttacctaccctgtgagctgccatgtaagtgctgggaa
tggaacctgggtcctctggaagagcagccagtgctcttactgctgaaccc
tctttccagcccatgaatataagttttaaacatcctcctgggtagcacca
ctgttgtaaacatttttaatcctcaaaccagataaagaccccacacaacc
tttcctattttatataagctttgagcagcccacgagcagagcagacacct
accctcctattgtttttagaatctgctctcctatgatatgagtattacta
tggtttcatctgctactcctactccattggccaacccctcggggccatgg
ttctagactcctaatccatgggacccttttcttcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60298943_60299827
seq2: B6Ng01-246O05.g_72_956 (reverse)

seq1  GGAAGAAAAGGTCACCATGGATTAGGAGTCTAGAAACCATGGCCCCGA-G  49
      |||||||||||   ||||||||||||||||||| |||||||||||||| |
seq2  GGAAGAAAAGGGTCCCATGGATTAGGAGTCTAG-AACCATGGCCCCGAGG  49

seq1  GGTTGGCCAATTGGAGTTAAGAGTAGCCCAGATGAAA-CATAGTAATAAC  98
      |||||||||| ||||| || ||||||  ||||||||| ||||||||| ||
seq2  GGTTGGCCAA-TGGAG-TAGGAGTAG--CAGATGAAACCATAGTAAT-AC  94

seq1  TCAATTATCAATAGGAGAGCAGATTCTAAAAAC-ATA-GAGGGTAGGTGT  146
      |||  |||| ||||||||||||||||||||||| ||| ||||||||||||
seq2  TCA--TATC-ATAGGAGAGCAGATTCTAAAAACAATAGGAGGGTAGGTGT  141

seq1  CTGCTCTGCTCGTGGGCTGCTC-AAGCTTAATAT-AAATA-GAAAGGTTG  193
      |||||||||||||||||||||| |||||| |||| ||||| |||||||||
seq2  CTGCTCTGCTCGTGGGCTGCTCAAAGCTT-ATATAAAATAGGAAAGGTTG  190

seq1  TGTGTGTCTTTTATCTGGTTTGA-GATTAAAAATGTTTACAACAGT-GTG  241
      |||| |   |||||||||||||| |||||||||||||||||||||| |||
seq2  TGTGGGGTCTTTATCTGGTTTGAGGATTAAAAATGTTTACAACAGTGGTG  240

seq1  CTACCCAGGA-GATGTTTAAAACTTATATTCATGGGCTGGAAAGAGGGTT  290
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAGGAGGATGTTTAAAACTTATATTCATGGGCTGGAAAGAGGGTT  290

seq1  CAGCAGTAAGAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCCATTCCC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAAGAGCACTGGCTGCTCTTCCAGAGGACCCAGGTTCCATTCCC  340

seq1  AGCACTTACATGGCAGCTCACAGGGTAGGTAAAACATCAATGCACATAAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTACATGGCAGCTCACAGGGTAGGTAAAACATCAATGCACATAAA  390

seq1  ATACAAGTAAAGAAATAAAGGAACACTTAAAAAAAATCCCTTATATTCAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGTAAAGAAATAAAGGAACACTTAAAAAAAATCCCTTATATTCAT  440

seq1  GAGGCTTAGGGAGGAAGCTCTAGGATAGAGGCTTGCCTTGTGTGCCCAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTAGGGAGGAAGCTCTAGGATAGAGGCTTGCCTTGTGTGCCCAAG  490

seq1  GTTCTGGTTGTTCCTCATTGCCACAGAAAGGTGGCTGCGGTGTATAATGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTTGTTCCTCATTGCCACAGAAAGGTGGCTGCGGTGTATAATGT  540

seq1  AGTGGTACATGTCCGTCTTCCTACCACTAGACAGACAGGAAGATATACTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTACATGTCCGTCTTCCTACCACTAGACAGACAGGAAGATATACTT  590

seq1  TAAAGGTGAGATTTTTTTTGTCTGTTGGTTTTTTTGTTTTTGTTTTTTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGAGATTTTTTTTGTCTGTTGGTTTTTTTGTTTTTGTTTTTTTT  640

seq1  TTTTTTGTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGAT  690

seq1  GTCCTGGAACTTACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTTACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCG  740

seq1  CCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAGGCGTGCACCACCATGCC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAGGCGTGCACCACCATGCC  790

seq1  TGGCTCTAAAGGTGAGATTTTAAGACAAGAAAAGTCTTGGAGAAGTGAGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTAAAGGTGAGATTTTAAGACAAGAAAAGTCTTGGAGAAGTGAGA  840

seq1  AGGGAAAGGGTCCAAACCCTCTCATCAGCAAGGAAGCAAGAATTC  885
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGGGTCCAAACCCTCTCATCAGCAAGGAAGCAAGAATTC  885