BAC Information

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BAC

Clone NameB6Ng01-247C06
Chromosome14 (Build37)
Map Location 110,964,658 - 110,965,788
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247C06.bB6Ng01-247C06.g
ACCGA055561GA055562
length1,1981,138
definitionB6Ng01-247C06.b B6Ng01-247C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccacaatacctctcctgggc
atatatccagaagatgtcctaaccggtaagaagaacacatgctccactgt
gttcatagcagccttgtttataatagccagaagttggaaagaacccagat
gccactcaacagataatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaaatgaatttatgaaattcctaggcaaatg
gatggacctggagggtatcatcctgagtgaagtaacccaatcacaaagga
actcgcacaatatgtactcactgataagtggatattagcccagaaactta
ggatacccaagatataagatacaacttgccaaacgcatgaaacttaagaa
gaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaaca
aaacacccatggaaggaattacagagacaaaatttgaagttgtggcgaaa
ggatggaccatctagtgattgccatatgcagggatccatcccataatcag
cttccaaatgctgacaccattgcatacactagcaaaattttgctgaaagg
acccagatatagctctctcttgtgagactatgctggggcctagcaaacac
agaagtggatgatcacagtcagctattggatgggtcatacgggccccaat
ggaagagctagagaaattacccaaggagctaaagggaactgcaaccctat
agtggaacaacaatatgaactaaccagtacccggagctcttgtctttagc
tgcatatgtatcaaagatggcctagtcgcatcactgcaaagagaaggcca
ttgaactggcaaactttatggtggggaacgtcaatgccaaaaggggatgg
gttggctaggtaatggtcggtcgtgtattagcataaacgaactggatc

gaattcattagcttttaccacctaggatccaaaattattaggaaaaaaag
gcatttatgtcattgcaaattaattcagttatgcttaaataaaaatgaga
gtataaaatggggtcttcttcctccttattttgatgtatctgagctgaac
agtcaggagaccactactccagagacaactctatctatgcagccccagtt
tactacagctgacaccctgctgcagcgatctaaatttaaagcagggacag
ttaggtaataagccaccacctacctaccctgacccatccctttttgagtt
ttgtatccttacaagatttgaaattctttgaaatgatttcattgtaagct
attcctttctgcttcatgtctccctgtagaattgcatgcaaaacaagtac
agaggctgctctgttcttgtttatatgaagtcggccatgtcacagcctca
catattcagtaataactttctagcgcttgtcactcagtcgaatgtttgca
gtaacaaatgcagtgacgaatcttaagctggctttatttggtagttgatg
aaggccagcagtctggatcattttctatactgagagtgtctaaggataac
ttacacatggtaagttttgcttaactcacttaatactgcttttcttggaa
attgtatgtctattcttatttttctttcatttgtttcttttcctgatatc
tggaagtcccatgaagattcaagtcaaccattcgagttctggcaaagatt
gagtcagataagtgaatcccatgcttcaaacaagtactctattatttatt
cataaaattgggtgacgatgtatttacttgagtctagacagagtaattac
tcagttttgacttactgattttttttttttgccagagtgtcacaaagtat
aattttatttgagtgcagaggggacagcaaatattatataatgtgaaacc
ctaatattctttaacaaacacattaaccttagcagcccaatttatttgag
ttactgtttacgaaggaaaatataaaacacttaaggacacattttttcat
gtttgtgccatgttttatgtgatcccaaggattccctttcaaggagtcaa
agattcttttgtaataagaagcagcaggtcacctccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110964658_110965788
seq2: B6Ng01-247C06.g_67_1204

seq1  GAATTCATTAGCTTTTACCACCTAGGATCCAAAATTATTAGGAAAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGCTTTTACCACCTAGGATCCAAAATTATTAGGAAAAAAAG  50

seq1  GCATTTATGTCATTGCAAATTAATTCAGTTATGCTTAAATAAAAATGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTATGTCATTGCAAATTAATTCAGTTATGCTTAAATAAAAATGAGA  100

seq1  GTATAAAATGGGGTCTTCTTCCTCCTTATTTTGATGTATCTGAGCTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAATGGGGTCTTCTTCCTCCTTATTTTGATGTATCTGAGCTGAAC  150

seq1  AGTCAGGAGACCACTACTCCAGAGACAACTCTATCTATGCAGCCCCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAGACCACTACTCCAGAGACAACTCTATCTATGCAGCCCCAGTT  200

seq1  TACTACAGCTGACACCCTGCTGCAGCGATCTAAATTTAAAGCAGGGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAGCTGACACCCTGCTGCAGCGATCTAAATTTAAAGCAGGGACAG  250

seq1  TTAGGTAATAAGCCACCACCTACCTACCCTGACCCATCCCTTTTTGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTAATAAGCCACCACCTACCTACCCTGACCCATCCCTTTTTGAGTT  300

seq1  TTGTATCCTTACAAGATTTGAAATTCTTTGAAATGATTTCATTGTAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCTTACAAGATTTGAAATTCTTTGAAATGATTTCATTGTAAGCT  350

seq1  ATTCCTTTCTGCTTCATGTCTCCCTGTAGAATTGCATGCAAAACAAGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCTGCTTCATGTCTCCCTGTAGAATTGCATGCAAAACAAGTAC  400

seq1  AGAGGCTGCTCTGTTCTTGTTTATATGAAGTCGGCCATGTCACAGCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGCTCTGTTCTTGTTTATATGAAGTCGGCCATGTCACAGCCTCA  450

seq1  CATATTCAGTAATAACTTTCTAGCGCTTGTCACTCAGTCGAATGTTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCAGTAATAACTTTCTAGCGCTTGTCACTCAGTCGAATGTTTGCA  500

seq1  GTAACAAATGCAGTGACGAATCTTAAGCTGGCTTTATTTGGTAGTTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAATGCAGTGACGAATCTTAAGCTGGCTTTATTTGGTAGTTGATG  550

seq1  AAGGCCAGCAGTCTGGATCATTTTCTATACTGAGAGTGTCTAAGGATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGCAGTCTGGATCATTTTCTATACTGAGAGTGTCTAAGGATAAC  600

seq1  TTACACATGGTAAGTTTTGCTTAACTCACTTAATACTGCTTTTCTTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATGGTAAGTTTTGCTTAACTCACTTAATACTGCTTTTCTTGGAA  650

seq1  ATTGTATGTCTATTCTTATTTTTCTTTCATTTGTTTCTTTTCCTGATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATGTCTATTCTTATTTTTCTTTCATTTGTTTCTTTTCCTGATATC  700

seq1  TGGAAGTCCCATGAAGATTCAAGTCAACCATTCGAGTTCTGGCAAAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCCCATGAAGATTCAAGTCAACCATTCGAGTTCTGGCAAAGATT  750

seq1  GAGTCAGATAAGTGAATCCCATGCTTCAAACAAGTACTCTATTATTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGATAAGTGAATCCCATGCTTCAAACAAGTACTCTATTATTTATT  800

seq1  CATAAAATTGGGTGACGATGTATTTACTTGAGTCTAGACAGAGTAATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTGGGTGACGATGTATTTACTTGAGTCTAGACAGAGTAATTAC  850

seq1  TCAGTTTTGACTTACTGA--TTTTTTTTTTGCCAGAGTGTCACAAAGTAT  898
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  TCAGTTTTGACTTACTGATTTTTTTTTTTTGCCAGAGTGTCACAAAGTAT  900

seq1  AATTTTATTTGAGTGCAGA-GGGACAGCAAATATTATATAATGTGAAACC  947
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATTTTATTTGAGTGCAGAGGGGACAGCAAATATTATATAATGTGAAACC  950

seq1  CTAATATTC-TTAACAAACACATTAACCTTAGCAG-CCAATTTATTTGAG  995
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  CTAATATTCTTTAACAAACACATTAACCTTAGCAGCCCAATTTATTTGAG  1000

seq1  TTACTGTTTACGAA-GAAAATATAAAACACTTAAGGACACAATTTTTCAT  1044
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  TTACTGTTTACGAAGGAAAATATAAAACACTTAAGGACACATTTTTTCAT  1050

seq1  G-TTGTGCCATG-TTTATGTGATCCCCAAAGAATCCCCTTTCAAAGAGTC  1092
      | |||||||||| |||||||||||||  ||| || ||||||||| |||||
seq2  GTTTGTGCCATGTTTTATGTGATCCC--AAGGATTCCCTTTCAAGGAGTC  1098

seq1  AAAGGATTC-TTTGTAAT-AGAGGCAGGCAGGTCA-CTCCAT  1131
      ||| ||||| |||||||| ||| ||| |||||||| ||||||
seq2  AAA-GATTCTTTTGTAATAAGAAGCA-GCAGGTCACCTCCAT  1138


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