BAC Information

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BAC

Clone NameB6Ng01-247E09
Chromosome14 (Build37)
Map Location 101,397,442 - 101,398,599
singlet/doubletsinglet
Overlap genenone
Upstream geneKlf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247E09.bB6Ng01-247E09.g
ACCGA055651GA055652
length1,2211,162
definitionB6Ng01-247E09.b B6Ng01-247E09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacttgaggaatactgaatggctgagaagcacctgaaaaattg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggcgagaatgtggagaaagaggaacacttctccattgctggtg
ggattgcaagcctgtacaaccactctggaaatcagtctagtggtttctca
gaaaattgggcatagcactaccggaggatccagcaatacctctcctgggc
atatatccagatgtcccaaccggtaagaaggacacatgctccactatgtt
catagcagccttatatataatagccagaagctggaaagaacccagatgcc
cctcaacagaggaatggatacagaaaatgtggtacatttacacaatggag
tactactcagctattaaaacgaatgaatttatgaaattcctaagcaaatg
gatggacctggagggcatcatcctgagtgaggtaacacaatcacaaagga
actcacacaatatgtactcactgataagtggatattagcccagaaactta
ggatacccaagttataagatacaatttgctaaacgcatgaaactcaagaa
gaatgaagaccaaagtgtggacactgtgccccttcttagaaatgggaaca
aaacacccatggaaggagttacagagacaaaatttggagctgtgacgaaa
ggatggaccatctactgatttccatatccagggattcatcccataatctg
attccaaacgctgacaccattgcatacactagcaagattttgctaaaatg
acccagatatagctgtctcttgtgagactatgctggggcctagcaaacac
agaagtggatgctcacagtcagatattggatgggtcacacggcccccaat
ggaggagctagagaaagtacccaagtagctaaagggaactgcaaccatat
agtggaacacatttatgaactaaccagtaccccggagctcttgttctcta
gctgcatatgtatcaaagaatggcctagttcagaacattcactgttaaag
aagaggtcctttgggaacttgctaactttatatgcccagtaccaggaaat
tgccaaggcaaatgggggaatgaggtggtatagggtactactggcctctc
tgatcgctgtgcgggtcagta
gaattccacacaaccatataatctatgggctctaggatattgttttattt
atgggaccaggacggggctcgcttctttcttataagtagatcagatttct
gtgctatctgattagcatttgttttcctctctttttttttttttgcttat
gttttgtttccttatgaaagaaatattcctataacatgtatctggtttac
aaaatgaaaccagatgctactctaaagaattatccagaagaactactggt
aaatttttatttattcaccatccaagatatgattcaggtatccttgttta
tgcatttatgaaatatggataaaaggtcaattattgaaaaggatgctaag
aacctaaatttaatgctataaatacatcttcatagttctttaaactcatt
ggatttctaacctgcttggtgcaagtaccaataactaaagtgatagcttt
tgattttctattagcttgtcaaagtagtatttgtgccccatgtaatactt
catctctaccttgataaactctacctttcaaagcaagtgaaactcactaa
agtagactgaaagggacgctgtgatgtgattccccaggtctgaactttgt
tattctgctgattttacaagtggtaagcttaccaagggcgtgctcttggg
atgtgacatctccctgtatagtcactctatgtctcttgagtaaaataaat
ggatagataagtaagtaaaattgtcatctactggaggaggaaaggaaaag
cccctgctctgacttggcactactgttcgttcttgagcttgttataggga
gcaatgacaagcagagattgtccagaaggaaaggcgtttcagaggaacaa
aagtcatgacatcatgtattgtaagatgaagaacactcacttttacatgc
ttatgattatagaataaatcttcatgagttgcataagacttgcccattgg
ttggtggtcatctaatgcatgttaacttttataacatggacatttatcaa
ggcaaaggcaattgactcttcttgaataggttagaatatctacctagtcc
ctcctcagattctatctatggatataagtatctttctgcctctagattta
cctatgttccaaattctcttcgatttcttcactttcctggtgtaaatcgc
aatattgataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101397442_101398599
seq2: B6Ng01-247E09.g_67_1228

seq1  GAATTCCACACAACCATATAATCTATGGGCTCTAGGATATTGTTTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACAACCATATAATCTATGGGCTCTAGGATATTGTTTTATTT  50

seq1  ATGGGACCAGGACGGGGCTCGCTTCTTTCTTATAAGTAGATCAGATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACCAGGACGGGGCTCGCTTCTTTCTTATAAGTAGATCAGATTTCT  100

seq1  GTGCTATCTGATTAGCATTTGTTTTCCTCTCTTTTTTTTTTTTTGCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATCTGATTAGCATTTGTTTTCCTCTCTTTTTTTTTTTTTGCTTAT  150

seq1  GTTTTGTTTCCTTATGAAAGAAATATTCCTATAACATGTATCTGGTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTCCTTATGAAAGAAATATTCCTATAACATGTATCTGGTTTAC  200

seq1  AAAATGAAACCAGATGCTACTCTAAAGAATTATCCAGAAGAACTACTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAACCAGATGCTACTCTAAAGAATTATCCAGAAGAACTACTGGT  250

seq1  AAATTTTTATTTATTCACCATCCAAGATATGATTCAGGTATCCTTGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTATTTATTCACCATCCAAGATATGATTCAGGTATCCTTGTTTA  300

seq1  TGCATTTATGAAATATGGATAAAAGGTCAATTATTGAAAAGGATGCTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTATGAAATATGGATAAAAGGTCAATTATTGAAAAGGATGCTAAG  350

seq1  AACCTAAATTTAATGCTATAAATACATCTTCATAGTTCTTTAAACTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAATTTAATGCTATAAATACATCTTCATAGTTCTTTAAACTCATT  400

seq1  GGATTTCTAACCTGCTTGGTGCAAGTACCAATAACTAAAGTGATAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTAACCTGCTTGGTGCAAGTACCAATAACTAAAGTGATAGCTTT  450

seq1  TGATTTTCTATTAGCTTGTCAAAGTAGTATTTGTGCCCCATGTAATACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCTATTAGCTTGTCAAAGTAGTATTTGTGCCCCATGTAATACTT  500

seq1  CATCTCTACCTTGATAAACTCTACCTTTCAAAGCAAGTGAAACTCACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTACCTTGATAAACTCTACCTTTCAAAGCAAGTGAAACTCACTAA  550

seq1  AGTAGACTGAAAGGGACGCTGTGATGTGATTCCCCAGGTCTGAACTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACTGAAAGGGACGCTGTGATGTGATTCCCCAGGTCTGAACTTTGT  600

seq1  TATTCTGCTGATTTTACAAGTGGTAAGCTTACCAAGGGCGTGCTCTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGCTGATTTTACAAGTGGTAAGCTTACCAAGGGCGTGCTCTTGGG  650

seq1  ATGTGACATCTCCCTGTATAGTCACTCTATGTCTCTTGAGTAAAATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACATCTCCCTGTATAGTCACTCTATGTCTCTTGAGTAAAATAAAT  700

seq1  GGATAGATAAGTAAGTAAAATTGTCATCTACTGGAGGAGGAAAGGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATAAGTAAGTAAAATTGTCATCTACTGGAGGAGGAAAGGAAAAG  750

seq1  CCCCTGCTCTGACTTGGCACTACTGTTCG-TCTTGAGCTTGTTATA-GGA  798
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  CCCCTGCTCTGACTTGGCACTACTGTTCGTTCTTGAGCTTGTTATAGGGA  800

seq1  GCAATGACAAGCAGAGATTGTCCAGAAGGAAAGGCGTTTCAGAGGAACAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACAAGCAGAGATTGTCCAGAAGGAAAGGCGTTTCAGAGGAACAA  850

seq1  AAGTCATGACATCATGTA-TGTAAGATGAAGAACACTCACTTTTACATGC  897
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGTCATGACATCATGTATTGTAAGATGAAGAACACTCACTTTTACATGC  900

seq1  TTATGATTATAGAATAAATCTTCATGAGTTGCATAAGACTTGCCCATTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTATAGAATAAATCTTCATGAGTTGCATAAGACTTGCCCATTGG  950

seq1  -TGGT-GTCATCTAATGCATGTTAACTTTATTAACAT-GACATTAATCAA  994
       |||| |||||||||||||||||||||||  |||||| |||||| |||||
seq2  TTGGTGGTCATCTAATGCATGTTAACTTTTATAACATGGACATTTATCAA  1000

seq1  GGCAAAAGCAA-TGACTCTTCT--GATAGGGTAGAATATCTTACCCTAGT  1041
      |||||| |||| ||||||||||   ||||| ||||||||||   ||||||
seq2  GGCAAAGGCAATTGACTCTTCTTGAATAGGTTAGAATATCT--ACCTAGT  1048

seq1  CCCTCCTCAGA-TCTATCTATGAATATTAAAGTATC-TTCTG-CTCTAGT  1088
      ||||||||||| |||||||||| ||||  ||||||| ||||| |||||| 
seq2  CCCTCCTCAGATTCTATCTATGGATAT--AAGTATCTTTCTGCCTCTAGA  1096

seq1  TTTTAAACTATGTTTCAAAAATCTCTTCAGATTTTCTTCCTCTTTTCCTG  1138
      |||  | ||||| ||| ||| ||||||| || |||||| | |||| |  |
seq2  TTT--ACCTATG-TTCCAAATTCTCTTC-GA-TTTCTT-CACTTTCCTGG  1140

seq1  TGT-AATCGC-ATATTAATAAA  1158
      ||| |||||| ||||| |||||
seq2  TGTAAATCGCAATATTGATAAA  1162