BAC Information

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BAC

Clone NameB6Ng01-247E15
Chromosome14 (Build37)
Map Location 42,039,739 - 42,040,826
singlet/doubletsinglet
Overlap geneLOC666093
Upstream geneLOC218945, LOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd
Downstream geneEG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247E15.bB6Ng01-247E15.g
ACCGA055661GA055662
length1,0871,181
definitionB6Ng01-247E15.b B6Ng01-247E15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggagaagctgcagtgcagccagatttggaggagtcccaaaat
tctcctgggacaactagtcatggagtttgttcagcagccatccatctgca
gcagttagggtgttcttcagagtcacatctcttctctaaagctttgaaaa
accacctgtctgagggccagaagctcttgtgggtatctgctgatgcaaag
ttagaaacagctctactaagtactcagcctgatgcacagagtcctaagga
gaaacacagcaaatacagcggtctgaaggaaatgataaagtaaccaaaat
ctgagtatccaaggctgtatcctcagattagaaaagttaaaagaaaaaat
ggagagggaacccagtaagtagcaatggggagaagggaggccaggtgtcc
ctggtgctcatgaactctgcacagagttcacagcaaatttcaatgtggat
tatgaaagtagaaaatgttcactgtgttttatgaaattcaccttgtttgg
gcagataatccatgcaggaagtctgagaaagggctaagaaacaaatttga
tctcagagaaacaggaggactggggttctctagtgtagtatactgtagtt
tggtgtggtgcggtgtgtttttggtgaagtgtagtgtattctcgtgtagt
gtttgctgcttggtatgcatgaggccctgggctccctctccagtttagac
cagttagagaagctgaaattagaatatcagttgcccaatcttaagacaga
ttttaggagggtgatggcagactgggaattgcaatctcagctaccaaggg
attacctcttctatagaaatttagtgggttgcaatgagccaaatatctcc
aagtaactgctaaagagtaatagatatgttctcaacacacaaaaataatg
agatagatgtctgaattgttggctctgccagataccatctttcagcaatg
tggtcttaccattgacttccttaaaggaggagagcaatggcagcagtctt
taatgattggggagtgtgtatgatgactccatgatgagcaaccctaaaca
gggtacccaaactttggttcctgggcttttcattggg
gaattcaatgtggatgccttacaggttaagaggatcagtcaagtaccaac
aaggtggccacatggacgcatccagaaaggcatggtacaggagaagctga
gagtcctacatgttcatgtgaaggctgctaatagaacattaatgtccagg
cagctagggtgagggttttgaccacacacacagtgtccaatatactctaa
cttggccactccttcttatgttgccactcagtgggttgagcataaaaaaa
ccataaaaaatattgatgcaaaaatactcaataacgtcttggaatctgtt
tctaataacacatgcaaatgatcactcaccatgatccaatatgcatcatg
tataggatgtaagaatgattcaatgttttggaattcatcaaagtaatata
ctatgtaataaatttaagaaattattatttgatcatttcattagatactg
tatcatcccagggatgcaggaatgattcaatatatggacatccattaatg
taatccactatataaaataacttaaaatatattggataatctcatcagat
gctgaaaaagtgtttgacaaaatacaacataacttcaagataaatgcatt
ggaggaatcagaaagtcacgtttcagaaagaaacgagcaaaatagaaccc
agttgccaacatcaaaatatatggagaaaaatttgaagccatcccattaa
aattagagacaaggaaagactttgccctcttcccctatattcaacatagt
ctttgacattttagccagagcaatcaggcaaaaatgccgaacaaagtgat
acaaattggaagggaggaattcaagacactacatacaatttgaggagtat
ggaatattacacataagtgagctcaaaaaatccaggagagaactcctaca
gctgataaccacttcagcaaagtcaatggatacaaaattaactcgaacaa
tccaggaacttttcctctactcaaaggatattatactgaggaagagattt
ttaaactacatacttcacaatagtcacaaataatatcttgtgtgactcga
acaaagcaagaaaggatctggatgacagaaacatttagtctctgacaaga
aatcaagaagacggtagagatggagatctcattgtcattgatgagccagc
attaaatataggttaaaaaaagggtttcgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42039739_42040826
seq2: B6Ng01-247E15.b_45_1131

seq1  GAATTCTAGGAGAAGCTGCAGTGCAGCCAGATTTGGAGGAGTCCCAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAGAAGCTGCAGTGCAGCCAGATTTGGAGGAGTCCCAAAAT  50

seq1  TCTCCTGGGACAACTAGTCATGGAGTTTGTTCAGCAGCCATCCATCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGGACAACTAGTCATGGAGTTTGTTCAGCAGCCATCCATCTGCA  100

seq1  GCAGTTAGGGTGTTCTTCAGAGTCACATCTCTTCTCTAAAGCTTTGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAGGGTGTTCTTCAGAGTCACATCTCTTCTCTAAAGCTTTGAAAA  150

seq1  ACCACCTGTCTGAGGGCCAGAAGCTCTTGTGGGTATCTGCTGATGCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTGTCTGAGGGCCAGAAGCTCTTGTGGGTATCTGCTGATGCAAAG  200

seq1  TTAGAAACAGCTCTACTAAGTACTCAGCCTGATGCACAGAGTCCTAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAACAGCTCTACTAAGTACTCAGCCTGATGCACAGAGTCCTAAGGA  250

seq1  GAAACACAGCAAATACAGCGGTCTGAAGGAAATGATAAAGTAACCAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACAGCAAATACAGCGGTCTGAAGGAAATGATAAAGTAACCAAAAT  300

seq1  CTGAGTATCCAAGGCTGTATCCTCAGATTAGAAAAGTTAAAAGAAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTATCCAAGGCTGTATCCTCAGATTAGAAAAGTTAAAAGAAAAAAT  350

seq1  GGAGAGGGAACCCAGTAAGTAGCAATGGGGAGAAGGGAGGCCAGGTGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGAACCCAGTAAGTAGCAATGGGGAGAAGGGAGGCCAGGTGTCC  400

seq1  CTGGTGCTCATGAACTCTGCACAGAGTTCACAGCAAATTTCAATGTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTCATGAACTCTGCACAGAGTTCACAGCAAATTTCAATGTGGAT  450

seq1  TATGAAAGTAGAAAATGTTCACTGTGTTTTATGAAATTCACCTTGTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGTAGAAAATGTTCACTGTGTTTTATGAAATTCACCTTGTTTGG  500

seq1  GCAGATAATCCATGCAGGAAGTCTGAGAAAGGGCTAAGAAACAAATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAATCCATGCAGGAAGTCTGAGAAAGGGCTAAGAAACAAATTTGA  550

seq1  TCTCAGAGAAACAGGAGGACTGGGGTTCTCTAGTGTAGTATACTGTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGAAACAGGAGGACTGGGGTTCTCTAGTGTAGTATACTGTAGTT  600

seq1  TGGTGTGGTGCGGTGTGTTTTTGGTGAAGTGTAGTGTATTCTCGTGTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGGTGCGGTGTGTTTTTGGTGAAGTGTAGTGTATTCTCGTGTAGT  650

seq1  GTTTGCTGCTTGGTATGCATGAGGCCCTGGGCTCCCTCTCCAGTTTAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTGCTTGGTATGCATGAGGCCCTGGGCTCCCTCTCCAGTTTAGAC  700

seq1  CAGTTAGAGAAGCTGAAATTAGAATATCAGTTGCCCAATCTTAAGACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGAGAAGCTGAAATTAGAATATCAGTTGCCCAATCTTAAGACAGA  750

seq1  TTTTAGGAGGGTGATGGCAGACTGGGAATTGCAATCTCAGCTACCAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAGGGTGATGGCAGACTGGGAATTGCAATCTCAGCTACCAAGGG  800

seq1  ATTACCTCTTCTATAGAAATTTAGTGGGTTGCAATGAGCCAAATATCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTCTTCTATAGAAATTTAGTGGGTTGCAATGAGCCAAATATCTCC  850

seq1  AAGTAACTGCTAAAGAGTAATAGATATGTTCTCAACACACAAAAATAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACTGCTAAAGAGTAATAGATATGTTCTCAACACACAAAAATAATG  900

seq1  AGATAGATGTCTGAATTGTTGGCTCTGCCAGATACCATCTTTTCAGCAAT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGATAGATGTCTGAATTGTTGGCTCTGCCAGATACCATC-TTTCAGCAAT  949

seq1  GTGGTCTTACCATTGACTTCCTTAAAGGAAGGAAGAGCAATGGCAGCAGT  1000
      |||||||||||||||||||||||||||||  | |||||||||||||||||
seq2  GTGGTCTTACCATTGACTTCCTTAAAGGA--GGAGAGCAATGGCAGCAGT  997

seq1  CTTTAATGATTGGGGAGTGTGTATGA-GACTCAATGATGAGCAACCCCAA  1049
      |||||||||||||||||||||||||| ||||| |||||||||||||| ||
seq2  CTTTAATGATTGGGGAGTGTGTATGATGACTCCATGATGAGCAACCCTAA  1047

seq1  ACAAGGTAACCCAAACTT--GGTCCTGGGCTTTTCATTGGG  1088
      ||| ||| ||||||||||  | |||||||||||||||||||
seq2  ACAGGGT-ACCCAAACTTTGGTTCCTGGGCTTTTCATTGGG  1087