BAC Information

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BAC

Clone NameB6Ng01-248I07
Chromosome14 (Build37)
Map Location 46,160,779 - 46,161,891
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1
Downstream geneEG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963, LOC100041724, Bmp4, LOC100041732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248I07.bB6Ng01-248I07.g
ACCGA056574GA056575
length1,1531,116
definitionB6Ng01-248I07.b B6Ng01-248I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagattgtaaaagctaagtcactcccttacacaggaattta
ccatcactaaggaagaaggaagtttcagaccaaaggagaaaccagaatag
attctatagcagagttacacccatacacacgtatttacaatggcctaagg
ggaaggtggactatacaagagactaaaataggaactatggcaaggacagg
aagcccttgaccctggcttctaagattagtgaattttaggtggagccctt
gttgatcccagctgttatcaatgtattctatcctgggtggttcctgttag
accttttgtgtttgcattcctctgttttatgtaagattccggttacctca
attgtaccttgcgaatatgtcacccaacttccttattgtcctctgcataa
aaagtctgatgctcaagttgtaaaattacactcagattgattccacatga
actctcctgtgtgtgtgtctgtttgtcgttcatccacgctttgcccaccc
gcgtcgagagaccccgttccacgcagacacagggacccagaaggtctgca
gcagctggcgcccgaacagggacaccagagcgagttagtctttagttctt
cttctttcttttttctttttcttctttattttctcaggcaaagacaggat
ctcatcggactgtgctgcagacaggctgattcgtagatcagttaaaggac
gagtaagtttttatcatggggcagtcagaatctaaagagaagaggctgtt
tctctcggttttcaagcacatgttgtctggaagaggcctaaaagtctcgg
ataaatttttacaagaattttatgatttcgtgcaaaaatcagtccctggt
ttccagaggagggaagcttaacattagaagattgggacgtgtgtaggtaa
ggatatgagaaagttctataagaaattaaaccgtacaggcagaaagggag
aagggtagaggaaagtgaatcagagactactgacagtgaggtgatgttga
atgggatattactgaggaatggaagtgtgattacgggagaagagatcatt
tcgcagctaccagacgcagtgagaaggaagtcttgctagagaactctcca
cctcactaaccctgtatggcaagggagtgagtcgtgatgacgttgcagta
taa
gaattctagtatctacaaagtggctcataactgtcttaactccagtctta
gggtacccgatgccctcttttggctttcatgggcactagttacacacaca
gtgcacagatatacatgcaggtaaaacacacacaaaatagaatgagggct
gggaatatgtctcggtggtagaacaccattgagtagaatgctactgttca
ggacacctggttcaatctccagcacctgccaaaaagaaacagcagagaca
tggaatcacagaggagaacaattctaggctccaagggtctgaaatggtgg
gaagaaaatgaatgaataaaatgtattttcacacccttctgtttccaatg
tagagctgtcacctggccgggagaatttgtatccctttgtgtcctgtctc
aggagaaagggggagcagatggagcctttcttctgcttgctgtttctcca
ttgccttcagctcaacagcaaactttaaattgaaggtgatacgttttggt
ttcttcacagccaatttggggccgaaatgtaaacagtaacagaactgtag
ggcccctgccacagctcagcagataaaggcacttgttaccacgcctgaca
acctgggttccatccctgggactcacatctcagaaagagagaatgacccc
tgccagatttcctctgatggaagtatagagggcatgctcgcgcatacaga
ggttgggagggggataaaatgtaatataaatatgctttaaagaactgaga
aagtagagatgccgcattccagcatgccatccaaatggtttcatgcttac
aggaccattatctgtgaaggagtactggaagcatgcatgtgatcaaaaca
tactttctctctctgcttttcagctacagatgacagaatctgcacacata
gcaacggggatgatcagaagcagcaaacgcagtcatggtggggggtaggt
catccaaaagggaacgacatcacagggaaaagctcatcttttttccagtc
tttgttatggttaatacatatatacatatacactagccagctccatcttc
tctgccttttatattaattaattatggaatttggcttagacatggggggg
agggtggtaagggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_46160779_46161891
seq2: B6Ng01-248I07.g_65_1180 (reverse)

seq1  ACCCCCTT-CCAC---CTCCCCCATGTCTAAAGCCCAAATACATAAATAA  46
      |||||||| ||||   | ||||||||||| ||||| || | ||||| |||
seq2  ACCCCCTTACCACCCTCCCCCCCATGTCT-AAGCCAAATTCCATAATTAA  49

seq1  TAAATAATAAAAAGCAGAGAAGATGGAGCT-GCTAGTGTTATATGTATTA  95
      | ||| |||||| ||||||||||||||||| ||||||| |||||||| ||
seq2  TTAAT-ATAAAAGGCAGAGAAGATGGAGCTGGCTAGTG-TATATGTA-TA  96

seq1  TATGTATTTTACCATAACAAAGACTGG-GAAAAGATGAGCTTTTCCCTGT  144
      |||||| || |||||||||||||||||  |||||||||||||||||||||
seq2  TATGTA-TTAACCATAACAAAGACTGGAAAAAAGATGAGCTTTTCCCTGT  145

seq1  GATGTCGTTCCCTTTTGGATGACCTACCCCC--ACATGACTGCGTTTGCT  192
      |||||||||||||||||||||||||||||||   ||||||||||||||||
seq2  GATGTCGTTCCCTTTTGGATGACCTACCCCCCACCATGACTGCGTTTGCT  195

seq1  GCTTCTGATCATCCCCGTTGCTATGTGTGCAGATTCTGTCATCTGTAGCT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGATCATCCCCGTTGCTATGTGTGCAGATTCTGTCATCTGTAGCT  245

seq1  GAAAAGCAGAGAGAGAAAGTATGTTTTGATCACATGCATGCTTCCAGTAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGAGAGAGAAAGTATGTTTTGATCACATGCATGCTTCCAGTAC  295

seq1  TCCTTCACAGATAATGGTCCTGTAAGCATGAAACCATTTGGATGGCATGC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACAGATAATGGTCCTGTAAGCATGAAACCATTTGGATGGCATGC  345

seq1  TGGAATGCGGCATCTCTACTTTCTCAGTTCTTTAAAGCATATTTATATTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCGGCATCTCTACTTTCTCAGTTCTTTAAAGCATATTTATATTA  395

seq1  CATTTTATCCCCCTCCCAACCTCTGTATGCGCGAGCATGCCCTCTATACT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATCCCCCTCCCAACCTCTGTATGCGCGAGCATGCCCTCTATACT  445

seq1  TCCATCAGAGGAAATCTGGCAGGGGTCATTCTCTCTTTCTGAGATGTGAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAGAGGAAATCTGGCAGGGGTCATTCTCTCTTTCTGAGATGTGAG  495

seq1  TCCCAGGGATGGAACCCAGGTTGTCAGGCGTGGTAACAAGTGCCTTTATC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGATGGAACCCAGGTTGTCAGGCGTGGTAACAAGTGCCTTTATC  545

seq1  TGCTGAGCTGTGGCAGGGGCCCTACAGTTCTGTTACTGTTTACATTTCGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCTGTGGCAGGGGCCCTACAGTTCTGTTACTGTTTACATTTCGG  595

seq1  CCCCAAATTGGCTGTGAAGAAACCAAAACGTATCACCTTCAATTTAAAGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATTGGCTGTGAAGAAACCAAAACGTATCACCTTCAATTTAAAGT  645

seq1  TTGCTGTTGAGCTGAAGGCAATGGAGAAACAGCAAGCAGAAGAAAGGCTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTGAGCTGAAGGCAATGGAGAAACAGCAAGCAGAAGAAAGGCTC  695

seq1  CATCTGCTCCCCCTTTCTCCTGAGACAGGACACAAAGGGATACAAATTCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCTCCCCCTTTCTCCTGAGACAGGACACAAAGGGATACAAATTCT  745

seq1  CCCGGCCAGGTGACAGCTCTACATTGGAAACAGAAGGGTGTGAAAATACA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCCAGGTGACAGCTCTACATTGGAAACAGAAGGGTGTGAAAATACA  795

seq1  TTTTATTCATTCATTTTCTTCCCACCATTTCAGACCCTTGGAGCCTAGAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCATTCATTTTCTTCCCACCATTTCAGACCCTTGGAGCCTAGAA  845

seq1  TTGTTCTCCTCTGTGATTCCATGTCTCTGCTGTTTCTTTTTGGCAGGTGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCCTCTGTGATTCCATGTCTCTGCTGTTTCTTTTTGGCAGGTGC  895

seq1  TGGAGATTGAACCAGGTGTCCTGAACAGTAGCATTCTACTCAATGGTGTT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTGAACCAGGTGTCCTGAACAGTAGCATTCTACTCAATGGTGTT  945

seq1  CTACCACCGAGACATATTCCCAGCCCTCATTCTATTTTGTGTGTGTTTTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCGAGACATATTCCCAGCCCTCATTCTATTTTGTGTGTGTTTTA  995

seq1  CCTGCATGTATATCTGTGCACTGTGTGTGTAACTAGTGCCCATGAAAGCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGTATATCTGTGCACTGTGTGTGTAACTAGTGCCCATGAAAGCC  1045

seq1  AAAAGAGGGCATCGGGTACCCTAAGACTGGAGTTAAGACAGTTATGAGCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGGCATCGGGTACCCTAAGACTGGAGTTAAGACAGTTATGAGCC  1095

seq1  ACTTTGTAGATACTAGAATTC  1113
      |||||||||||||||||||||
seq2  ACTTTGTAGATACTAGAATTC  1116