BAC Information

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BAC

Clone NameB6Ng01-248N08
Chromosome14 (Build37)
Map Location 61,789,679 - 61,790,801
singlet/doubletsinglet
Overlap geneSacs
Upstream geneNupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19
Downstream geneSgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248N08.bB6Ng01-248N08.g
ACCGA056809GA056810
length1,1211,161
definitionB6Ng01-248N08.b B6Ng01-248N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggccagccagggatacatggtgagactctgtctcaaacaaac
aaacaaaaataataagtcccttgtgcatacaaaaagtagaccaactcccc
cccccccaacacacacactgatagactaatgactatcctgttgctatttt
gctactttgtcctagtcatctgctagctgttcaagtttacctttgcagtc
ttttgaatcttattgctgcctgccagtcaatatgtaacaggaaatgtatc
attgtgatatgacatgtggtcactgccctgctgcctgcctttcatgtctc
tggctccaaaccttgacagctgttcttatcaacttctttagagtttctgt
gctacctaaaaatattgaacaagaaaggggaaaaacagctgaatacatga
ccatgtagcctatcctagcacttaaggaggcagaggcagaaaaatcctga
cacttcagaaccgccttgtgctttgtctcagcaaacaaaatggagaacat
attttaatacggtggtacacataggataagatttaccttcagagtccttt
tgaatcgtgcagttccatggcatcacagtcatgatattgtgcaaccacca
gcaagtacatgtccagaactctagctggtaaaattgcaaccaggcctacc
caaacagttgcttaggatacgttgtctcactctttgggtgtccttgtcat
tcaggggtgtatccagttgggatacagtagcttcagtagattttatgact
attatctgaagaagctagtgactcctcggcctaggatgccactagctctg
gcatctctcctgagttctgatctgcatttcccatgagtaatgacattgtg
tgatgtatcccaaaggcattctgctctagaggttcaaagctgcctctgat
cagcctccttgtgggctgactctgcttctcttgtggcatgcctgatggct
gaggtcagtccttcctgtcagggcttccactccatgcctagggttctatt
gttacaacatcctgctggtgcccagaagaaagaattcttattagggagga
cgagagagggatgcaatttctgacttctgagacttaactgagatttgtct
tgagtctggatgtaacatgtc
gaattccaggttggcttccagcctaggtttatgaaggaatccatctttcc
gcgtttctgatcatcattagatgggtgctgtgtccttacacaattcgaat
tatcttcccccgagtgaaggtaaaagcaggaagaaagaatggtggctgtc
ctctcctgtcactgtgtgtgtgttcacacattttgttactgttactcgct
ggccagagcaagaaatgtcttctcttatcttggctcatgttctctaagaa
cattgttccggtctctcagtatctgaataaaacagtgccactctttgcaa
gaagaaagcagggacggtgtcaggtagaaaataccattgctgcatgtgaa
ggcctaggtaactgttgcctgtctggccagccagtttgtgctgttactaa
tgtcataaagaaaatttttcatgtgctgtcataggaaactttctcatgcc
tgagttgattgcgtattctgttatgttctgtgctttagtgttcttggaaa
caaatcacaacagaagtcagttagaactgctttgaatagttagccacagt
aagcttggacccgaaccaactagccagcagcacttcctgtacctatgtat
gagcttttatggtttcttgcttttataatttgcccctggtgtggacccca
gcataagaaagacacctgcaccaatgtaagaagttgtttggattaaaact
tccattttgagtagggggtcaaataaagtttacgtttctaagacctccat
gggaaatgacatcctacttgacagaaggagacatgtgcatcctggtgggc
aagttaagacatgaacgttaggcaagacaagtcccctgccacagctgctt
acccccaaccaatgagaacaggataaaaggaataacaagacatgctccta
aagaaaccccatatcctaaatcttgattggtgaaaataacttgtcacaga
atgtttgtgaatttcagacttaaaagctctataggaggttaggctggact
tacagctcagctcccaaatctgggactgcatcctgatcagtcaggtgtta
gggagccacatccacatcaatcccttgtttggcttgaagatgatgttctg
actattgggtgatgtccgcaccaaccattacatcgtccccctcataacaa
aggtgtttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_61789679_61790801
seq2: B6Ng01-248N08.b_47_1167

seq1  GAATTCTAGGCCAGCCAGGGATACATGGTGAGACTCTGTCTCAAACAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGCCAGGGATACATGGTGAGACTCTGTCTCAAACAAAC  50

seq1  AAACAAAAATAATAAGTCCCTTGTGCATACAAAAAGTAGACCAACTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATAATAAGTCCCTTGTGCATACAAAAAGTAGACCAACTCCCC  100

seq1  CCCCCCCAACACACACACTGATAGACTAATGACTATCCTGTTGCTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCAACACACACACTGATAGACTAATGACTATCCTGTTGCTATTTT  150

seq1  GCTACTTTGTCCTAGTCATCTGCTAGCTGTTCAAGTTTACCTTTGCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTGTCCTAGTCATCTGCTAGCTGTTCAAGTTTACCTTTGCAGTC  200

seq1  TTTTGAATCTTATTGCTGCCTGCCAGTCAATATGTAACAGGAAATGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATCTTATTGCTGCCTGCCAGTCAATATGTAACAGGAAATGTATC  250

seq1  ATTGTGATATGACATGTGGTCACTGCCCTGCTGCCTGCCTTTCATGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATATGACATGTGGTCACTGCCCTGCTGCCTGCCTTTCATGTCTC  300

seq1  TGGCTCCAAACCTTGACAGCTGTTCTTATCAACTTCTTTAGAGTTTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCAAACCTTGACAGCTGTTCTTATCAACTTCTTTAGAGTTTCTGT  350

seq1  GCTACCTAAAAATATTGAACAAGAAAGGGGAAAAACAGCTGAATACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTAAAAATATTGAACAAGAAAGGGGAAAAACAGCTGAATACATGA  400

seq1  CCATGTAGCCTATCCTAGCACTTAAGGAGGCAGAGGCAGAAAAATCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGCCTATCCTAGCACTTAAGGAGGCAGAGGCAGAAAAATCCTGA  450

seq1  CACTTCAGAACCGCCTTGTGCTTTGTCTCAGCAAACAAAATGGAGAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGAACCGCCTTGTGCTTTGTCTCAGCAAACAAAATGGAGAACAT  500

seq1  ATTTTAATACGGTGGTACACATAGGATAAGATTTACCTTCAGAGTCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATACGGTGGTACACATAGGATAAGATTTACCTTCAGAGTCCTTT  550

seq1  TGAATCGTGCAGTTCCATGGCATCACAGTCATGATATTGTGCAACCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCGTGCAGTTCCATGGCATCACAGTCATGATATTGTGCAACCACCA  600

seq1  GCAAGTACATGTCCAGAACTCTAGCTGGTAAAATTGCAACCAGGCCTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTACATGTCCAGAACTCTAGCTGGTAAAATTGCAACCAGGCCTACC  650

seq1  CAAACAGTTGCTTAGGATACGTTGTCTCACTCTTTGGGTGTCCTTGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTTGCTTAGGATACGTTGTCTCACTCTTTGGGTGTCCTTGTCAT  700

seq1  TCAGGGGTGTATCCAGTTGGGATACAGTAGCTTCAGTAGATTTTATGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGTGTATCCAGTTGGGATACAGTAGCTTCAGTAGATTTTATGACT  750

seq1  ATTATCTGAAGAAGCTAGTGACTCCTCGGCCTAGGATGCCACTAGCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTGAAGAAGCTAGTGACTCCTCGGCCTAGGATGCCACTAGCTCTG  800

seq1  GCATCTCTCCTGAGTTCTGATCTGCATTTCCCATGAGTAATGACATTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTCCTGAGTTCTGATCTGCATTTCCCATGAGTAATGACATTGTG  850

seq1  TGATGTATCCCAAAGGCATTCTGCTCTAGAGGTTCAAAGCTGCCTCTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATCCCAAAGGCATTCTGCTCTAGAGGTTCAAAGCTGCCTCTGAT  900

seq1  CAGCCTCCTTGTGGGCTGACTCTGCTTCTCTTGTGGCATGCCTGATGGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTTGTGGGCTGACTCTGCTTCTCTTGTGGCATGCCTGATGGCT  950

seq1  GAGGTCAGTCCTTCCTGTCAGGGCTTCCACTCCATGCCTA-GGTTCTATT  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGGTCAGTCCTTCCTGTCAGGGCTTCCACTCCATGCCTAGGGTTCTATT  1000

seq1  GTTACAACATCCTGCTTGGTGCCCAG-AGAAAGA--TCTTA-TAGGAAGA  1045
      ||||||||||||||| |||||||||| |||||||  ||||| |||| || 
seq2  GTTACAACATCCTGC-TGGTGCCCAGAAGAAAGAATTCTTATTAGGGAGG  1049

seq1  CAGAGGAAGAGGGATGCA--TTCTGAACTCTGAAGACATTTAACCTGAAG  1093
        |||  |||||||||||  ||||||  |||| ||||  |||| ||| ||
seq2  ACGAG--AGAGGGATGCAATTTCTGACTTCTG-AGAC--TTAA-CTG-AG  1092

seq1  ATTTGTCTTGGGGTCTGGGTGGTACATGTC  1123
      ||||||||| | |||||| ||  |||||||
seq2  ATTTGTCTT-GAGTCTGGATGTAACATGTC  1121