BAC Information

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BAC

Clone NameB6Ng01-249N08
Chromosome14 (Build37)
Map Location 109,297,781 - 109,298,785
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668757, EG668761
Downstream geneSlitrk1, LOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249N08.bB6Ng01-249N08.g
ACCGA057549GA057550
length1,004926
definitionB6Ng01-249N08.b B6Ng01-249N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcccagataccttggcatagaataattttgaataaaataactt
ttaaaatagtcactactgtggccagtcaacattccaaaaaagctgaaaat
ttcgaagagatgttcctttctggattaatagagagaatttgttctttaga
gtgttctatatttctcaaggaatgagcgattctgaaacattcggtcagga
tggagggatgagatcctgtgcttcagcagatggcacagttgaagaaaggc
caaggcattcatgctaaatgacacacaattagactgaggaatgccgagaa
tctataaaaacaggcagcagctccttattattattttgtcacgaattctc
acctttctttctgattcgttactgagctcataattttagtctgctttaag
ttttattgagatgcgattttgatttcttgtaactatatcaggcaataata
ttttcctattctgctgtggctaaacaagtatcctgcgaacagaaatgtca
aggtggtatggaacacaggacagcaatggactgagacgtcaaagatgtgg
gaaataagtgcttctcattgggccggaaacttttctctaggatatagaaa
gttatatttgaaaaatgtatgatgtaagtttttttaaatgtttaagccaa
aatacatgctttaatagaacaattctgatatcttttgagacactgcacaa
tgaaccagacccaacactgtgaacagtgtagtcaatacaagctaagtaaa
tagtaaggtgagaaagagaacattctgacttttcgtcttattaactttca
aaattagtgtgggaagtgttcatggcaagaactatcattagtattttcag
tagtaatattataaaaacatgcatatattatttatgttctacctgggaaa
acttataataggttgtacagcttactcaatcaccagtaattgttctattc
caataggacatatcccattcaatttacataacatgtaatccatgacatgt
tatt
gaattccccttaaagagatagcccctctggctatctatcccttgcttcag
agaagatgagtggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttgtgtttggcacatgtgttaggtgcagagtgtgcgggtccgca
ctttcaccatggtagcataggcttttgctgcagtggaggcgggacagtct
gctcagattcggtttgccactctaaaagaaattatgctgcgttatgccgt
ggggtgcgaggctaagcactgcacagaggatagcttgctgttggcatcct
gtagaaggcacgtctgattgcatgaaggttcagtgtcctagttcccttcc
cccaggaaaaactacatgggagctggccaagacctctctgggtgatgagc
ctaagggatggttttatgtagggcccctatgctagcacactggggatcag
acctctaccttcacccatgaggcttgcttgcagcaattaagatctggcca
tagattatcaacatcctggccttttgatgcacctgccacaagcaaaacac
aatctccccaggtgtggcttggcatgatagagaggtagtcagtgataaga
ctccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgttt
gtcacccaaggacgggtaaggggcatggctgcggggggctatctacagac
attctctctgccagaaaagaaaaaagggggagatgttaggagcgggtgtg
gcggcagccccaaaggcgccagggactgtagctaaatcgtatgacttgca
cctgacttcctcatatagccacaaacatcttgagagcttcgcatgtggac
catgataccggtgaatccagttgatggagatatgccctgcagcctgatta
gctgaagctgcttgcctgtggaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109297781_109298785
seq2: B6Ng01-249N08.b_49_1052

seq1  GAATTCATCCCAGATACCTTGGCATAGAATAATTTTGAATAAAATAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCAGATACCTTGGCATAGAATAATTTTGAATAAAATAACTT  50

seq1  TTAAAATAGTCACTACTGTGGCCAGTCAACATTCCAAAAAAGCTGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAGTCACTACTGTGGCCAGTCAACATTCCAAAAAAGCTGAAAAT  100

seq1  TTCGAAGAGATGTTCCTTTCTGGATTAATAGAGAGAATTTGTTCTTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAGAGATGTTCCTTTCTGGATTAATAGAGAGAATTTGTTCTTTAGA  150

seq1  GTGTTCTATATTTCTCAAGGAATGAGCGATTCTGAAACATTCGGTCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTATATTTCTCAAGGAATGAGCGATTCTGAAACATTCGGTCAGGA  200

seq1  TGGAGGGATGAGATCCTGTGCTTCAGCAGATGGCACAGTTGAAGAAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGATGAGATCCTGTGCTTCAGCAGATGGCACAGTTGAAGAAAGGC  250

seq1  CAAGGCATTCATGCTAAATGACACACAATTAGACTGAGGAATGCCGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCATTCATGCTAAATGACACACAATTAGACTGAGGAATGCCGAGAA  300

seq1  TCTATAAAAACAGGCAGCAGCTCCTTATTATTATTTTGTCACGAATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAAACAGGCAGCAGCTCCTTATTATTATTTTGTCACGAATTCTC  350

seq1  ACCTTTCTTTCTGATTCGTTACTGAGCTCATAATTTTAGTCTGCTTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTTTCTGATTCGTTACTGAGCTCATAATTTTAGTCTGCTTTAAG  400

seq1  TTTTATTGAGATGCGATTTTGATTTCTTGTAACTATATCAGGCAATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGAGATGCGATTTTGATTTCTTGTAACTATATCAGGCAATAATA  450

seq1  TTTTCCTATTCTGCTGTGGCTAAACAAGTATCCTGCGAACAGAAATGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATTCTGCTGTGGCTAAACAAGTATCCTGCGAACAGAAATGTCA  500

seq1  AGGTGGTATGGAACACAGGACAGCAATGGACTGAGACGTCAAAGATGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTATGGAACACAGGACAGCAATGGACTGAGACGTCAAAGATGTGG  550

seq1  GAAATAAGTGCTTCTCATTGGGCCGGAAACTTTTCTCTAGGATATAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGTGCTTCTCATTGGGCCGGAAACTTTTCTCTAGGATATAGAAA  600

seq1  GTTATATTTGAAAAATGTATGATGTAAGTTTTTTTAAATGTTTAAGCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATTTGAAAAATGTATGATGTAAGTTTTTTTAAATGTTTAAGCCAA  650

seq1  AATACATGCTTTAATAGAACAATTCTGATATCTTTTGAGACACTGCACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGCTTTAATAGAACAATTCTGATATCTTTTGAGACACTGCACAA  700

seq1  TGAACCAGACCCAACACTGTGAACAGTGTAGTCAATACAAGCTAAGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGACCCAACACTGTGAACAGTGTAGTCAATACAAGCTAAGTAAA  750

seq1  TAGTAAGGTGAGAAAGAGAACATTCTGACTTTTTCGTCTTATTAACTTTC  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAGTAAGGTGAGAAAGAGAACATTCTGAC-TTTTCGTCTTATTAACTTTC  799

seq1  AAAATTAGTGTGGGAAGTGTTCATGGCAAGAACTATCAATAGTA-TTTCA  849
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  AAAATTAGTGTGGGAAGTGTTCATGGCAAGAACTATCATTAGTATTTTCA  849

seq1  GTAGTAATATTATAAAAACATGCATATA-TATTTATGTTCTACCTGGGAA  898
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTAGTAATATTATAAAAACATGCATATATTATTTATGTTCTACCTGGGAA  899

seq1  AAC-TATAATAGTTTGTACAGCTAAC-CAATCA-CAGTAATTGTTCTAAT  945
      ||| |||||||| |||||||||| || |||||| ||||||||||||| ||
seq2  AACTTATAATAGGTTGTACAGCTTACTCAATCACCAGTAATTGTTCT-AT  948

seq1  TCAAATAGGACATAATCACATTCATATTTACATAACAATGTAATTCAATG  995
      || |||||||||| ||| |||||| ||||||||||| |||||| || |||
seq2  TCCAATAGGACAT-ATCCCATTCA-ATTTACATAAC-ATGTAA-TCCATG  994

seq1  ACATGTTATT  1005
      ||||||||||
seq2  ACATGTTATT  1004