BAC Information

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BAC

Clone NameB6Ng01-251O23
Chromosome14 (Build37)
Map Location 52,185,359 - 52,186,467
singlet/doubletsinglet
Overlap geneEG638695, EG434459
Upstream geneOlfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041
Downstream geneLOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251O23.bB6Ng01-251O23.g
ACCGA059067GA059068
length1,1131,178
definitionB6Ng01-251O23.b B6Ng01-251O23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgggcctatgttaaggagtctggggacagggacccatgaaat
cctggacatccagacagtgctgggttgcagggagttcacaggaggtttga
gcttgctggcctgcaagcagaccagggcaaggtgttctcaagaatcttgg
acatgcaggcacttctagaagtctcagaggagctgagcatggaggaggcc
agcaggctgagaactagccctgaaatcagagaatggggaattctggatta
gctcaaaggtgactagcccaggagtactgaggggccttctgttggagact
tagatggcaaggctctgtaggcaaaggctttttctccatgtaacccacag
ttggtttgatgagagagacagtccttggttctaaactgtttattgattgt
atttcatggaaatgaaagcataacacgtcttgaggttagactagaagtta
agtaccttgtgaggaaggaatgtccaggaagggaaacttattgactgaac
cctaccatcttctattacctcattagcagggcaaaccctattcggttcta
aatgaccacaggccatgttcctatgcagagattttggtcccatgaaagaa
gccttgtaggaagcaggtgacacttttgccatctactgtgggtctgggac
ttccaacccacttaactttaccaaattctggacatggtggtctactgtcc
caggtgttagtctgagttttattgatgtgaggagacaccaggacatatgt
ttagtatacgggtctcaaagcctaccctccacactgacacactatttcta
acaaggccacaactcctaaaagtaccactcccatattcaagccaccacac
tcctctgcaatctcccaagacatttacctcactctgtcctactgtttccc
ttttgtccttcacaaattatgtgtcttattattttcttgaaatatcctcc
tacaagccaacactagtgcattatcttctatggttactgcagtttaaata
cacatctctagacattcactgttaccatccttcacaagaccacatcatgt
gtattttgttcttttggtcttgggtatatcactccagaaagggttattca
tgtctccaatcca
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggctttataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactataataactgcttctatttctt
taggggatatgggactgtttagaaggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttattgagtatagccttttgtagaatgatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgattttgttgatt
aggattttgtccctttgccctttagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttcttca
tggaaggcactcagagctatgagtttccctctagaaatgcttcattggtt
tcccaaggtttgggtacggttgtggcctcaatttcattaaactctaaaaa
gtctttaatttctttccttatcttcttgacaaggttatcaattgagaaga
agtgtggtccagttccacggttgaggtgctctgctattcttgctatggaa
gtactgcctacatgtcgcaactgtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_52185359_52186467
seq2: B6Ng01-251O23.b_49_1161

seq1  GAATTCCATGGGCCTATGTTAAGGAGTCTGGGGACAGGGACCCATGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGGCCTATGTTAAGGAGTCTGGGGACAGGGACCCATGAAAT  50

seq1  CCTGGACATCCAGACAGTGCTGGGTTGCAGGGAGTTCACAGGAGGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACATCCAGACAGTGCTGGGTTGCAGGGAGTTCACAGGAGGTTTGA  100

seq1  GCTTGCTGGCCTGCAAGCAGACCAGGGCAAGGTGTTCTCAAGAATCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTGGCCTGCAAGCAGACCAGGGCAAGGTGTTCTCAAGAATCTTGG  150

seq1  ACATGCAGGCACTTCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGGCACTTCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCC  200

seq1  AGCAGGCTGAGAACTAGCCCTGAAATCAGAGAATGGGGAATTCTGGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTGAGAACTAGCCCTGAAATCAGAGAATGGGGAATTCTGGATTA  250

seq1  GCTCAAAGGTGACTAGCCCAGGAGTACTGAGGGGCCTTCTGTTGGAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAGGTGACTAGCCCAGGAGTACTGAGGGGCCTTCTGTTGGAGACT  300

seq1  TAGATGGCAAGGCTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGCAAGGCTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAG  350

seq1  TTGGTTTGATGAGAGAGACAGTCCTTGGTTCTAAACTGTTTATTGATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGATGAGAGAGACAGTCCTTGGTTCTAAACTGTTTATTGATTGT  400

seq1  ATTTCATGGAAATGAAAGCATAACACGTCTTGAGGTTAGACTAGAAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGGAAATGAAAGCATAACACGTCTTGAGGTTAGACTAGAAGTTA  450

seq1  AGTACCTTGTGAGGAAGGAATGTCCAGGAAGGGAAACTTATTGACTGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTGTGAGGAAGGAATGTCCAGGAAGGGAAACTTATTGACTGAAC  500

seq1  CCTACCATCTTCTATTACCTCATTAGCAGGGCAAACCCTATTCGGTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCATCTTCTATTACCTCATTAGCAGGGCAAACCCTATTCGGTTCTA  550

seq1  AATGACCACAGGCCATGTTCCTATGCAGAGATTTTGGTCCCATGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCACAGGCCATGTTCCTATGCAGAGATTTTGGTCCCATGAAAGAA  600

seq1  GCCTTGTAGGAAGCAGGTGACACTTTTGCCATCTACTGTGGGTCTGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTAGGAAGCAGGTGACACTTTTGCCATCTACTGTGGGTCTGGGAC  650

seq1  TTCCAACCCACTTAACTTTACCAAATTCTGGACATGGTGGTCTACTGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACCCACTTAACTTTACCAAATTCTGGACATGGTGGTCTACTGTCC  700

seq1  CAGGTGTTAGTCTGAGTTTTATTGATGTGAGGAGACACCAGGACATATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTAGTCTGAGTTTTATTGATGTGAGGAGACACCAGGACATATGT  750

seq1  TTAGTATACGGGTCTCAAAGCCTACCCTCCACACTGACACACTATTTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATACGGGTCTCAAAGCCTACCCTCCACACTGACACACTATTTCTA  800

seq1  ACAAGGCCACAACTCCTAAAAGTACCACTCCCATATTCAAGCCACCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCACAACTCCTAAAAGTACCACTCCCATATTCAAGCCACCACAC  850

seq1  TCCTCTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTCCC  900

seq1  TTTTGTCCTTCACAAATTATGTGTCTTATTATTTTCTTGAAATATCCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCTTCACAAATTATGTGTCTTATTATTTTCTTGAAATATCCTCC  950

seq1  TACAAGCCAACACTAGTGCATTATCTTCTATGGTTACTGCAGTTTAAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCCAACACTAGTGCATTATCTTCTATGGTTACTGCAGTTTAAATA  1000

seq1  CACATCTCTAGACATTCACTGTTACCATCC-TCACAAGA-CACATCATGT  1048
      |||||||||||||||||||||||||||||| |||||||| ||||||||||
seq2  CACATCTCTAGACATTCACTGTTACCATCCTTCACAAGACCACATCATGT  1050

seq1  GGTATTTGTCCTTTTGGGTCTGGGTTATATCACT-CAGAAA-GTTTATTC  1096
      |   ||||| ||||| ||||| || ||||||||| |||||| | ||||||
seq2  GTATTTTGTTCTTTT-GGTCTTGGGTATATCACTCCAGAAAGGGTTATTC  1099

seq1  ATGTCTCC-ATCCA  1109
      |||||||| |||||
seq2  ATGTCTCCAATCCA  1113