BAC Information

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BAC

Clone NameB6Ng01-252F01
Chromosome14 (Build37)
Map Location 109,574,604 - 109,575,712
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668761, Slitrk1
Downstream geneLOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252F01.bB6Ng01-252F01.g
ACCGA059345GA059346
length1,1121,022
definitionB6Ng01-252F01.b B6Ng01-252F01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactaaccaagtgaaaagaccaaactgaaaacattttcttcagct
ttctttcgtgaattattttaatagctttatactttcattatttgcatgat
attgctctcaacatatatctgacatagtaatttaaaccctttttattctc
tgaactgtttaaagaagaaacagtggtttaacatactagtatactcatgt
tttatcgtagcatattcttaccaaggcctgccttttataggttcttaaaa
ttttgataaagagttatgttttccatttagtatatatccccttgcagctt
tcagtaaattccataatccatactgtttaacataagtaaattaactactt
gtaatgaagaatgttctgggataatgtaaaagaaaaaaaatatattctga
ctgctacttgctttatgggtgccttatatatgttatttcatctctctgat
ctacagttttatttttatatgtatatataaaaccttcaccttttatgtat
atataaagcttgtgtgaattatgaaaccctgtaataatacagaggtggat
taggtaacatcagtggtaaccaatgataggaactgattatctaagtctcc
gaaacactcgggtattatctgaataggaaataagtgcctcagaagagcca
ctgcaagagaaaaacagtaatgttaaaaaaaaaaaacccaaatgggacat
caggtaggacagatataatttatatagtttctcagccaaggaaaccagtt
gtttctctttctgtaaaatgtctgcatcttgtagaacaatattcatataa
gtctgtatatacagacataattacgtatgcatttatgttcactgggatgg
tgttggaaatatatgttcaataaaattaaatgaaacaagtactttttgaa
ttaaataagtttataaggacccaatgtgattatacatttatgataccata
atgttcaaaataattgtgtttaatctttcttctcctgaaactacactgcc
tagaaaagtgaaattgaacccaggttcacaggccatggtatgttgctata
gaaagcacttcaggagtctacttactgttaatcaattctcgtgactcact
atttgccttatt

gaattcacagaattgtgactacacaaagataatccttcgacaggcccact
ttagtggctgaaaagaattttgaagatcaggtataaaaaagatattaaac
ttaagtcttattcaactatttgagttgtggacatgaaaatgagaatcctt
ggacgcggggagggggggtgacagaaaaatgtaatccaagaacgataatc
tcaaaaagaataacacataaagagaaatccatgatcggagagtgagggtc
agcctgaattattaagctaaatattaactagtaaacatttacaatggagc
tcattaagacagaagatgcaacaaagcattatttaagtttctgaaacaaa
attttaactcagcaaaaggaaaagaagtgcagtatattgaagtggaaatt
taagggttttttttttaaagtcagttttgttgggtgattgttttgctggg
caaaagacttgatgggatgttttcctgaagtggacacaggtgtgaaaggc
taagtgtgaaggagcatttcatggaagcagacacagatgaagggatgttc
tgataaagtgtgaggggatgcctgtaagaagcatgaaggattcttgctac
cagtatgcatgcattggcctgccttacaatgcataactgagctggatttg
tctggattccatagagagaagtgcaccaaaaaacttctggtggtatagtg
cggtttcttgctgcttcagtcaagggctcagactgactagcagagtaatt
tacagctgagacagatgcatgtgctgaggcaagttaccccttgcagggca
cgtgatattttagagggtgataagttaagactcaaattgaaaaattgacc
agaagcttgagcttgtgcttgctgggtacagcaacatttgtgggtcctgg
caatcttcactgattttcagttccctggagagagggcacaggtcaaaatg
gccttgacattccttctgggttcctcctgctgcttagagttgaaggctgg
aggcattgaattcttctgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109574604_109575712
seq2: B6Ng01-252F01.b_46_1157

seq1  GAATTCACTAACCAAGTGAAAAGACCAAACTGAAAACATTTTCTTCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAACCAAGTGAAAAGACCAAACTGAAAACATTTTCTTCAGCT  50

seq1  TTCTTTCGTGAATTATTTTAATAGCTTTATACTTTCATTATTTGCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCGTGAATTATTTTAATAGCTTTATACTTTCATTATTTGCATGAT  100

seq1  ATTGCTCTCAACATATATCTGACATAGTAATTTAAACCCTTTTTATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTCAACATATATCTGACATAGTAATTTAAACCCTTTTTATTCTC  150

seq1  TGAACTGTTTAAAGAAGAAACAGTGGTTTAACATACTAGTATACTCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGTTTAAAGAAGAAACAGTGGTTTAACATACTAGTATACTCATGT  200

seq1  TTTATCGTAGCATATTCTTACCAAGGCCTGCCTTTTATAGGTTCTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCGTAGCATATTCTTACCAAGGCCTGCCTTTTATAGGTTCTTAAAA  250

seq1  TTTTGATAAAGAGTTATGTTTTCCATTTAGTATATATCCCCTTGCAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAAAGAGTTATGTTTTCCATTTAGTATATATCCCCTTGCAGCTT  300

seq1  TCAGTAAATTCCATAATCCATACTGTTTAACATAAGTAAATTAACTACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAATTCCATAATCCATACTGTTTAACATAAGTAAATTAACTACTT  350

seq1  GTAATGAAGAATGTTCTGGGATAATGTAAAAGAAAAAAAATATATTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAAGAATGTTCTGGGATAATGTAAAAGAAAAAAAATATATTCTGA  400

seq1  CTGCTACTTGCTTTATGGGTGCCTTATATATGTTATTTCATCTCTCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACTTGCTTTATGGGTGCCTTATATATGTTATTTCATCTCTCTGAT  450

seq1  CTACAGTTTTATTTTTATATGTATATATAAAACCTTCACCTTTTATGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTTTTATTTTTATATGTATATATAAAACCTTCACCTTTTATGTAT  500

seq1  ATATAAAGCTTGTGTGAATTATGAAACCCTGTAATAATACAGAGGTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGCTTGTGTGAATTATGAAACCCTGTAATAATACAGAGGTGGAT  550

seq1  TAGGTAACATCAGTGGTAACCAATGATAGGAACTGATTATCTAAGTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAACATCAGTGGTAACCAATGATAGGAACTGATTATCTAAGTCTCC  600

seq1  GAAACACTCGGGTATTATCTGAATAGGAAATAAGTGCCTCAGAAGAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTCGGGTATTATCTGAATAGGAAATAAGTGCCTCAGAAGAGCCA  650

seq1  CTGCAAGAGAAAAACAGTAATGTTAAAAAAAAAAAACCCAAATGGGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGAGAAAAACAGTAATGTTAAAAAAAAAAAACCCAAATGGGACAT  700

seq1  CAGGTAGGACAGATATAATTTATATAGTTTCTCAGCCAAGGAAACCAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGGACAGATATAATTTATATAGTTTCTCAGCCAAGGAAACCAGTT  750

seq1  GTTTCTCTTTCTGTAAAATGTCTGCATCTTGTAGAACAATATTCATATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTTCTGTAAAATGTCTGCATCTTGTAGAACAATATTCATATAA  800

seq1  GTCTGTATATACAGACATAATTACGTATGCATTTATGTTCACTGGGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTATATACAGACATAATTACGTATGCATTTATGTTCACTGGGATGG  850

seq1  TGTTGGAAATATATGTTCAATAAAAATTAAATGAAACAAGTACTTTTTGA  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTTGGAAATATATGTTCAAT-AAAATTAAATGAAACAAGTACTTTTTGA  899

seq1  ATTAAATAAG-TTATAAGGACCCAAATGTGA-TATACATTTATGATACCA  948
      |||||||||| |||||||||||| ||||||| ||||||||||||||||| 
seq2  ATTAAATAAGTTTATAAGGACCC-AATGTGATTATACATTTATGATACC-  947

seq1  ATAATGTTC-AAATAATTGTGTTT-ATCTTTCCTTCTCCTGAAAACTACA  996
      ||||||||| |||||||||||||| |||||| ||||||||| ||||||||
seq2  ATAATGTTCAAAATAATTGTGTTTAATCTTT-CTTCTCCTG-AAACTACA  995

seq1  CTG-CTAGAAAAGTGAAA-TGAA-CCAAGTTCACA-GCCATGG-ATG-TG  1040
      ||| |||||||||||||| |||| ||| ||||||| ||||||| ||| ||
seq2  CTGCCTAGAAAAGTGAAATTGAACCCAGGTTCACAGGCCATGGTATGTTG  1045

seq1  GTATAGAAAAGCAC-TCAGGAGTCTACTTACTGTTATTCAATTCTCCGTG  1089
       ||||| ||||||| ||||||||||||||||||||| |||||||| ||||
seq2  CTATAG-AAAGCACTTCAGGAGTCTACTTACTGTTAATCAATTCT-CGTG  1093

seq1  TACTCACTATTTGCTTTATT  1109
       ||||||||||||| |||||
seq2  -ACTCACTATTTGCCTTATT  1112


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