BAC Information

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BAC

Clone NameB6Ng01-253C14
Chromosome14 (Build37)
Map Location 43,119,220 - 43,120,341
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285
Downstream geneLOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253C14.bB6Ng01-253C14.g
ACCGA059970GA059971
length1,1211,156
definitionB6Ng01-253C14.b B6Ng01-253C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaattttcctaggttacctggcacccatgcaaagctcttgtggg
ttcaagataatgccatagaattgtcaaggttggatcagatctgtcacctc
tcatgtaggataaccatgcagactaggcatgaagtgcctaattgatgaaa
tgcagaattgagaagttcctcagtaggtagggttagaggaagcaataacc
atttaaggccagctaaccagtgttgagatgaaacttcaaactatcctgca
tggatggatcctgaaataaaggtcacatgcctatgttggagagcatgtct
gtgcaaggctaggaagggagagcgatggatgatattgatcttaacacact
agatctcagagtactgaggaagtacttcttccagtggatgcttcattctt
ttgaaggtctcctgtaacaaatctcatttctgagactaaatgtgagtcag
agacttaatttgtgaaagaattaatcccctgaatccccaaactggtgctg
tcaaaccagggcttttaagcagaagcctgagaaggattgggggaaaagtt
cagttgcctactgtctttggtcacattctctttctaagctaactttgaca
cagaaagggacagctgtaaacacacaggaaaccaatcatcatcaagtgat
acggctcttctagtccatctttcaattctctggtagattctgagccttat
ttacttttaggttttcagtgtagtgcttggcttgtcgaatgctttttctg
catctaacgagatgatcatgtggtttttgtctttgagtttgtttatataa
tggattacattgatggattttcgtatattaaaccatccatgcatccctgg
aataaaacctaattggtcaggatggatcattgctttaatgtgttcttgga
ttcggttagcaagaattttattgaggatttttgcatcgatattcataaag
ggaaattggtctgaagttctctatctttgttgggacctttctgtggttta
ggtatcagagtaattgtggcttcatagaatgagttgggtagagttccctc
tacttctattttgtggaatagtttgttgcagaactggatagatcttcttt
gaggtctggtagactctgcac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggattgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacatttacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggccctagcaaa
catagaagtgggatgctcacagtcggctattggatgggatcacatggccc
ccaatgaaggagctagagaaagtaccaaagagctaaccctatagtggaca
cattatgagctaccagtaccccggagctctgactctagctgcatatgcat
caaaggattgctagtcgtcatcactgaagagagcccatgacacgcaacct
taattgccagtacatggaacgcagcatagaggaagttgggtggtgggtta
agggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43119220_43120341
seq2: B6Ng01-253C14.b_45_1165 (reverse)

seq1  GTGCAGAGTTCTACCAGACCTTCAAAGAAGATCTAATCCCAGTTCTGC-A  49
      |||||||| ||||||||||| ||||||||||||||   |||||||||| |
seq2  GTGCAGAG-TCTACCAGACC-TCAAAGAAGATCTA--TCCAGTTCTGCAA  46

seq1  CAAACTATTCCACAAAATAGAAGTAGAGGGAACTCTACCCAACTCATTCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATTCCACAAAATAGAAGTAGAGGGAACTCTACCCAACTCATTCT  96

seq1  ATGAAGCCACAATTACTCTGATACCTAAACCACAGAAAGGT-CCAACAAA  148
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGAAGCCACAATTACTCTGATACCTAAACCACAGAAAGGTCCCAACAAA  146

seq1  GATAGAGAACTTCAGACCAATTTCCC-TTATGAATATCGATGCAAAAATC  197
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GATAGAGAACTTCAGACCAATTTCCCTTTATGAATATCGATGCAAAAATC  196

seq1  CTCAATAAAATTCTTGCTAACCGAATCCAAGAACACATTAAAGCAATGAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAAAATTCTTGCTAACCGAATCCAAGAACACATTAAAGCAATGAT  246

seq1  CCATCCTGACCAATTAGGTTTTATTCCAGGGATGCATGGATGGTTTAATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTGACCAATTAGGTTTTATTCCAGGGATGCATGGATGGTTTAATA  296

seq1  TACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAA  346

seq1  AACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTCGACAAGCCAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTCGACAAGCCAAG  396

seq1  CACTACACTGAAAACCTAAAAGTAAATAAGGCTCAGAATCTACCAGAGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACACTGAAAACCTAAAAGTAAATAAGGCTCAGAATCTACCAGAGAA  446

seq1  TTGAAAGATGGACTAGAAGAGCCGTATCACTTGATGATGATTGGTTTCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGATGGACTAGAAGAGCCGTATCACTTGATGATGATTGGTTTCCT  496

seq1  GTGTGTTTACAGCTGTCCCTTTCTGTGTCAAAGTTAGCTTAGAAAGAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTACAGCTGTCCCTTTCTGTGTCAAAGTTAGCTTAGAAAGAGAA  546

seq1  TGTGACCAAAGACAGTAGGCAACTGAACTTTTCCCCCAATCCTTCTCAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAAAGACAGTAGGCAACTGAACTTTTCCCCCAATCCTTCTCAGG  596

seq1  CTTCTGCTTAAAAGCCCTGGTTTGACAGCACCAGTTTGGGGATTCAGGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTTAAAAGCCCTGGTTTGACAGCACCAGTTTGGGGATTCAGGGG  646

seq1  ATTAATTCTTTCACAAATTAAGTCTCTGACTCACATTTAGTCTCAGAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTTTCACAAATTAAGTCTCTGACTCACATTTAGTCTCAGAAAT  696

seq1  GAGATTTGTTACAGGAGACCTTCAAAAGAATGAAGCATCCACTGGAAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGTTACAGGAGACCTTCAAAAGAATGAAGCATCCACTGGAAGAA  746

seq1  GTACTTCCTCAGTACTCTGAGATCTAGTGTGTTAAGATCAATATCATCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCCTCAGTACTCTGAGATCTAGTGTGTTAAGATCAATATCATCCA  796

seq1  TCGCTCTCCCTTCCTAGCCTTGCACAGACATGCTCTCCAACATAGGCATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCTCCCTTCCTAGCCTTGCACAGACATGCTCTCCAACATAGGCATG  846

seq1  TGACCTTTATTTCAGGATCCATCCATGCAGGATAGTTTGAAGTTTCATCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTATTTCAGGATCCATCCATGCAGGATAGTTTGAAGTTTCATCT  896

seq1  CAACACTGGTTAGCTGGCCTTAAATGGTTATTGCTTCCTCTAACCCTACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTGGTTAGCTGGCCTTAAATGGTTATTGCTTCCTCTAACCCTACC  946

seq1  TACTGAGGAACTTCTCAATTCTGCATTTCATCAATTAGGCACTTCATGCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGAACTTCTCAATTCTGCATTTCATCAATTAGGCACTTCATGCC  996

seq1  TAGTCTGCATGGTTATCCTACATGAGAGGTGACAGATCTGATCCAACCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGCATGGTTATCCTACATGAGAGGTGACAGATCTGATCCAACCTT  1046

seq1  GACAATTCTATGGCATTATCTTGAACCCACAAGAGCTTTGCATGGGTGCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTCTATGGCATTATCTTGAACCCACAAGAGCTTTGCATGGGTGCC  1096

seq1  AGGTAACCTAGGAAAATTAGAATTC  1122
      |||||||||||||||||||||||||
seq2  AGGTAACCTAGGAAAATTAGAATTC  1121