BAC Information

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BAC

Clone NameB6Ng01-253M16
Chromosome14 (Build37)
Map Location 4,420,111 - 4,421,260
singlet/doubletsinglet
Overlap geneLOC100041119
Upstream geneLOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808
Downstream gene2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253M16.bB6Ng01-253M16.g
ACCGA060426GA060427
length1,1891,153
definitionB6Ng01-253M16.b B6Ng01-253M16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtgattggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccggagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccccaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctttatactaagaataaacagactgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatattattc
ggcgtgactctaactaaggaagtgaaagatctgtatgataaaaacttcaa
gtctctgaagaaagaaattaaagaagatctcagaagatggacggatctcc
catgctcatggattggcaggatcaacattgtaaaaatggctatcttgcca
aaagcaatctacagattcaatgcaatccccatcaaaattccaactcaatt
cttcaacgaattagaaggagcaatttgcaaattcatctggaataacaaaa
aacctaggatagcaaaaactcttctcaaggataaaagaacctctggtgga
atcaccatgcctgacctaaagctttactacagagcaattgtgataaaaac
tgcatggtactggtatagagacagacaagtagacaaatggaatagaattg
aagacccagaaatgaacccacacacctatggtcacttgatcttcgacaag
ggagctaaaaccatccagtggaagaaagacagcattttcaacaattggtg
ctggcacaactgggttgttatcatgtagaagatgcaaatcgaatccatac
ttatctccgtggtactaaggtcaaatctaagtggatcaaagaactttcac
ataaaatcagagacactgcaactatagacgaaaaagtggggaaagtcttt
gaagaatatggcacaggtaaagtcctgaacgacgcaatggctgtgctgta
gatcgaagaatggacacaatgggtaaccttaactggcac
gaattctccagctttggaaggagaggtttccaaagaggatcccactggtc
catgagaggctccaggagaggcaccccagaaaaggaccaagttggggaga
actagttagcaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggattaccagcaggaatgttctcctggctgctcaggctatg
tcagaaagagaatggcgatgaaggagagaccagaccaatggagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatcattctggagaagg
cacagtgagtcctgggcagagttggggatcttactggtagaggtaggctt
gagctgggccttccaggagtaggtcttacaagctgaagccttggactttg
ccaatgtcaaagagtcaagaatttctgatgattagtttgacagagccagt
aattgacaaacctgcaactacttttctgggagctatttaatttcattttg
agtggcaaagaatgccaggagtgggcactatgagaataacagtgtgtcct
ttcatggaagggagttgaaacacttcatcttccagattactgtaggtaac
ttgagtctctgatgaaaagaacagagaaggatgctcccctggtcatgtca
tgtggtgaggactcagacactttggatttgaagacacacgattaattagt
gcttgatagtgctaagcactatgaaattcaggatttccctgcaacacatc
tgatatgacctggcaatgttcctcatatctttatgtctgaggcagcttat
agatttcagggcaaagggtcctgtaacaggagtgtggcatatgtctgaca
ttggtgggttaggaagaggacatagcttagcaatcagctggagatagctt
ttctgctcttttagggattcaccctgtctttaccttttctcctcccctca
gtcttcttctgggactctgaatggtcttccccctcccctggcatcaagta
cgcaacctcaattggttattctaatctgcagggtctgcttagaaaatata
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4420111_4421260
seq2: B6Ng01-253M16.g_64_1216

seq1  GAATTCTCCAGCTTTGGAAGGAGAGGTTTCCAAAGAGGATCCCACTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGCTTTGGAAGGAGAGGTTTCCAAAGAGGATCCCACTGGTC  50

seq1  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGTTGGGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGTTGGGGAGA  100

seq1  ACTAGTTAGCAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAGCAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150

seq1  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200

seq1  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250

seq1  TTTGCTCTGGGATTACCAGCAGGAATGTTCTCCTGGCTGCTCAGGCTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTGGGATTACCAGCAGGAATGTTCTCCTGGCTGCTCAGGCTATG  300

seq1  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAATGGAGAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAATGGAGAAGGAAG  350

seq1  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATCATTCTGGAGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATCATTCTGGAGAAGG  400

seq1  CACAGTGAGTCCTGGGCAGAGTTGGGGATCTTACTGGTAGAGGTAGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGTCCTGGGCAGAGTTGGGGATCTTACTGGTAGAGGTAGGCTT  450

seq1  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500

seq1  CCAATGTCAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTCAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGCCAGT  550

seq1  AATTGACAAACCTGCAACTACTTTTCTGGGAGCTATTTAATTTCATTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACAAACCTGCAACTACTTTTCTGGGAGCTATTTAATTTCATTTTG  600

seq1  AGTGGCAAAGAATGCCAGGAGTGGGCACTATGAGAATAACAGTGTGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAAAGAATGCCAGGAGTGGGCACTATGAGAATAACAGTGTGTCCT  650

seq1  TTCATGGAAGGGAGTTGAAACACTTCATCTTCCAGATTACTGTAGGTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAGGGAGTTGAAACACTTCATCTTCCAGATTACTGTAGGTAAC  700

seq1  TTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCATGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCATGTCA  750

seq1  TGTGGTGAGGACTCAGACACTTTGGATTTGAAGACACACGATTAATTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGAGGACTCAGACACTTTGGATTTGAAGACACACGATTAATTAGT  800

seq1  GCTTGATAGTGCTAAGCACTATGAAATTCAGGATTTCCCTGCAACACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATAGTGCTAAGCACTATGAAATTCAGGATTTCCCTGCAACACATC  850

seq1  TGATATGACCTGGCAATGTTCCTCATATCTTTATGTCTGAGGCAGCTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGACCTGGCAATGTTCCTCATATCTTTATGTCTGAGGCAGCTTAT  900

seq1  AGATTTCAGGGCAAGGGGTCCTGTAACAGGGAGTGTGGCATATGTCTGAC  950
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  AGATTTCAGGGCAAAGGGTCCTGTAACA-GGAGTGTGGCATATGTCTGAC  949

seq1  ATTGGT-GGTTAGGAAGAGGACATAGCTTAGCAAACCAGCTGGAAGATAG  999
      |||||| ||||||||||||||||||||||||| || ||||||| ||||||
seq2  ATTGGTGGGTTAGGAAGAGGACATAGCTTAGC-AATCAGCTGG-AGATAG  997

seq1  CTTTTCTGCTCTTTTAGGGATTCACCCTGTCTTTACCTTTTCTC--TCCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  CTTTTCTGCTCTTTTAGGGATTCACCCTGTCTTTACCTTTTCTCCTCCCC  1047

seq1  TCAGTCTTCTTCTTGGGACTCTGAATGGTCT--CCCCTCCCCTGGGCCAT  1095
      |||||||||||| ||||||||||||||||||  ||||||||||||  |||
seq2  TCAGTCTTCTTC-TGGGACTCTGAATGGTCTTCCCCCTCCCCTGG--CAT  1094

seq1  CAAGTACGCAAACTCATTTGTGTTTATCT-ATCTGCAGGGTCTGC-TAGA  1143
      ||||||||||| |||| ||| |||  ||| ||||||||||||||| ||||
seq2  CAAGTACGCAACCTCAATTG-GTTATTCTAATCTGCAGGGTCTGCTTAGA  1143

seq1  A---ATACTT  1150
      |   ||||||
seq2  AAATATACTT  1153