BAC Information

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BAC

Clone NameB6Ng01-254O15
Chromosome14 (Build37)
Map Location 116,655,206 - 116,656,363
singlet/doubletsinglet
Overlap geneGpc5
Upstream genenone
Downstream geneGpc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254O15.bB6Ng01-254O15.g
ACCGA061256GA061257
length1,2091,154
definitionB6Ng01-254O15.b B6Ng01-254O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtaacctatttactagttgagttatttgggttgctggtgtc
ctaaatatcttgagttctttgtaaatttttgatattaggcctctgccaga
tgtagggttggtaaagatccttttccaatctgtaggctgctgattagtcc
tattgacaatgttctttgccttatggaagctttacagtttcatgaggttg
tagagctgtgataggcagcctattttggttgaaagaggcttgctccagtg
acccagtagaaaactctacgagggacagaacaccgaggcacgttcccaga
gacaagtgcctgaaaccacagagcccccaactccataattctgtgactgt
aagtcacatagacaatgttccaagcttttggcattgtggctagattctac
ctccatagtaacatgactatagccaggtatgctcctccccacagttacct
gatagcctagtccactataaaaggagttgcttatccccttcttgctctct
ttagctctcaccttttttctctctagccttccttctctctctctcccttc
ccccctatctccacatggccatggacagactctctccctctttctacctt
ctctctttctctctacctttctacaataaagctctaaagccatagactgg
ctctgttcatcaagcaggcccaccatgcttgaatgatgggataggctttt
tcctaatgagccctgtctaacctctggccagaaggccttcctgcacttaa
gccactgattggaccaaaagctctcgcctgtgtgggaaccacccagcgct
cccctctcctcctgcactctcctcccttcaggcccagggctgactgagct
gcccccctggggttcccattgtttctcagctcttctgaggtgtccagcag
tgtctgggatgctcgagctgagatctggtacctaggactgcccttgtcca
ccatctgcaacggggtccatggcttccaacagccagacaccccacatggg
ctgcatgaaaagtgtgctgcagtccttctgtgtcatatttgctgctcaga
gcacctgaacctctggtgggacatggttttctcccactccctttattcca
acacccactaccctcttgagttccaatttacctaatgctgatctggaagc
gagcactcggtccgtaggaatgctcgtcaatgcatcagtattcacgttct
ttcctagga

gaattctttgtgtgttatgggctcctctgcaagtatcttcttgaatagta
aacttagctctttccataacaaatatggaagtcttacacttaatatattt
tctctgattctacctgctatttctgcatgtggtaccttccccatttcata
taggcttttatgaactaggacttgaaccactcatggatgagcccgatgcc
cttagtcctgccactgtgagaagggtctgctttccttaatcatttggaaa
ggaaatcaaaccacacgagaactcctaccccagagggctctagacatctg
tcagtctggaaatcttctgagcagacatagcagaagcaaaagtttggaaa
ggtatctgttaaaagggtggctttttttgaaccaatgatctttctcactg
gctttaaattgtgttattagcattaaacttcctgaggcaaatgactaaaa
ctaattgcattcgtgagaagaacttcagtagtattcccaaatgtgtaatt
tcatttttcatgcttacagttacattcatccgtgatggaatactccattg
tacttttcacagtatttagaattatgtatgatatttgaatttaaatgagt
taattgacttagtttacttgaaatgaccgagtacatgatagctttgccaa
aaagttgttattctaaaaataacctatgaactatttcactaagttacaca
aaacaaatatttacactttaagtgtgtccttcttcaaataatacatgcat
tttagtaagtataaagcctttaacaatttcaataaagttattagtgttac
gaggtaattcagatcacatacaaatggactacaccactttaaaaataaat
aaacagcacattgctagtgattattatgttcgaagtaaattggacccaca
gttctcagtttcattatctgtttttgcataaatgatattgtgcattattg
atatattaaagaattaatcacaacaaacaaaccatggagtccattatgta
tttacctttacattttcaaatataatgatgttttaattttaaggaattta
catctaaggaattattttatatcattttcaagtaaaccatacaattataa
aatagtttctactataccaaatattgttttcatacaatatgggtctgaat
caca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_116655206_116656363
seq2: B6Ng01-254O15.g_70_1223 (reverse)

seq1  TGTGA-TCAGA-CCATATTGTATGAAAAACATATATTTGTATAGTAGAAA  48
      ||||| ||||| ||||||||||||||||  |||| || ||||||||| ||
seq2  TGTGATTCAGACCCATATTGTATGAAAACAATAT-TTGGTATAGTAG-AA  48

seq1  ATTATTTTATTAAATTGTATGTTTTACTTTGAAAATGAATTATTAAAATA  98
      | ||||||||  ||||||||| ||||| ||||||||||  || |||||||
seq2  ACTATTTTAT--AATTGTATGGTTTAC-TTGAAAATGA--TA-TAAAATA  92

seq1  ATTCCTTAAGATGTTAAATTCCTTAAAATTAAAACAATCATTATTATTTG  148
      ||||||| ||||| ||||||||||||||||||||| ||||||| ||||||
seq2  ATTCCTT-AGATG-TAAATTCCTTAAAATTAAAAC-ATCATTA-TATTTG  138

seq1  AAAATGTAAA-GTAAATACATAATGGACTCCAT-GTTTGTTTGTTGTGAT  196
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  AAAATGTAAAGGTAAATACATAATGGACTCCATGGTTTGTTTGTTGTGAT  188

seq1  TAATTCTTT-ATATATCAAT-ATGCACATTATCATTTATGC-AAAACAGA  243
      ||||||||| |||||||||| ||||||| |||||||||||| ||||||||
seq2  TAATTCTTTAATATATCAATAATGCACAATATCATTTATGCAAAAACAGA  238

seq1  TAATG-AACTGAGAACTGTGGGTCCAATTTACTTCGAACATAATAATCAC  292
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAACTGAGAACTGTGGGTCCAATTTACTTCGAACATAATAATCAC  288

seq1  TAGCAATGTGCTGTTTATTTATTTTTAAAGTGGTGTAGTCCATTTGTATG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGTGCTGTTTATTTATTTTTAAAGTGGTGTAGTCCATTTGTATG  338

seq1  TGATCTGAATTACCTCGTAACACTAATAACTTTATTGAAATTGTTAAAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGAATTACCTCGTAACACTAATAACTTTATTGAAATTGTTAAAGG  388

seq1  CTTTATACTTACTAAAATGCATGTATTATTTGAAGAAGGACACACTTAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACTTACTAAAATGCATGTATTATTTGAAGAAGGACACACTTAAA  438

seq1  GTGTAAATATTTGTTTTGTGTAACTTAGTGAAATAGTTCATAGGTTATTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAATATTTGTTTTGTGTAACTTAGTGAAATAGTTCATAGGTTATTT  488

seq1  TTAGAATAACAACTTTTTGGCAAAGCTATCATGTACTCGGTCATTTCAAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATAACAACTTTTTGGCAAAGCTATCATGTACTCGGTCATTTCAAG  538

seq1  TAAACTAAGTCAATTAACTCATTTAAATTCAAATATCATACATAATTCTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTAAGTCAATTAACTCATTTAAATTCAAATATCATACATAATTCTA  588

seq1  AATACTGTGAAAAGTACAATGGAGTATTCCATCACGGATGAATGTAACTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGTGAAAAGTACAATGGAGTATTCCATCACGGATGAATGTAACTG  638

seq1  TAAGCATGAAAAATGAAATTACACATTTGGGAATACTACTGAAGTTCTTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGAAAAATGAAATTACACATTTGGGAATACTACTGAAGTTCTTC  688

seq1  TCACGAATGCAATTAGTTTTAGTCATTTGCCTCAGGAAGTTTAATGCTAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAATGCAATTAGTTTTAGTCATTTGCCTCAGGAAGTTTAATGCTAA  738

seq1  TAACACAATTTAAAGCCAGTGAGAAAGATCATTGGTTCAAAAAAAGCCAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAATTTAAAGCCAGTGAGAAAGATCATTGGTTCAAAAAAAGCCAC  788

seq1  CCTTTTAACAGATACCTTTCCAAACTTTTGCTTCTGCTATGTCTGCTCAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAACAGATACCTTTCCAAACTTTTGCTTCTGCTATGTCTGCTCAG  838

seq1  AAGATTTCCAGACTGACAGATGTCTAGAGCCCTCTGGGGTAGGAGTTCTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCCAGACTGACAGATGTCTAGAGCCCTCTGGGGTAGGAGTTCTC  888

seq1  GTGTGGTTTGATTTCCTTTCCAAATGATTAAGGAAAGCAGACCCTTCTCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTTTGATTTCCTTTCCAAATGATTAAGGAAAGCAGACCCTTCTCA  938

seq1  CAGTGGCAGGACTAAGGGCATCGGGCTCATCCATGAGTGGTTCAAGTCCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCAGGACTAAGGGCATCGGGCTCATCCATGAGTGGTTCAAGTCCT  988

seq1  AGTTCATAAAAGCCTATATGAAATGGGGAAGGTACCACATGCAGAAATAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAAAAGCCTATATGAAATGGGGAAGGTACCACATGCAGAAATAG  1038

seq1  CAGGTAGAATCAGAGAAAATATATTAAGTGTAAGACTTCCATATTTGTTA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGAATCAGAGAAAATATATTAAGTGTAAGACTTCCATATTTGTTA  1088

seq1  TGGAAAGAGCTAAGTTTACTATTCAAGAAGATACTTGCAGAGGAGCCCAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAGCTAAGTTTACTATTCAAGAAGATACTTGCAGAGGAGCCCAT  1138

seq1  AACACACAAAGAATTC  1158
      ||||||||||||||||
seq2  AACACACAAAGAATTC  1154


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