BAC Information

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BAC

Clone NameB6Ng01-254O23
Chromosome14 (Build37)
Map Location 89,581,960 - 89,582,537
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668624, LOC668625, Pcdh20
Downstream geneEG328451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254O23.bB6Ng01-254O23.g
ACCGA061270GA061271
length1,233578
definitionB6Ng01-254O23.b B6Ng01-254O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcttcagctgttttcttggtttttatttttattaattaatttat
ttttttatattccatattttatttcccctgatccacctgccaaagctcct
ttcccctacctgtcaccacatggatgtccctacccccaactccacctgac
ctctaaactccctggggactgcagtttcttaagggttaggtgcctcatct
atgaatgaacactggcccagcagtcgtctactgtatgtgtgttgggggcc
tcctatcagcaagtgtatgctgcctgtttggtggtccaatgtctgagata
tctcaggggtccagattaattgagactgctgttcctcctacaggatcacc
cttctcttcaggttcttccagtcttccctaattcaacagcaggagtcagc
tgcttctgtccattggttgtgtgcaaatatctgcatcctatctcctgagg
ttgcctatttccattgtttctgtttccctctgggtttccgtccttttccc
tcacccaataccagaccaggttcccctcccctcttccttccctgtccaat
ttccctcccaggtccctccctccctcccacttgagattgttttcttctct
ccccaaagtgaaactgaggtgtccttacttgggtccttcagctttttgaa
atttttgattctgtactttcttttttggctaatatctacttattagtgag
gacataccatgcatgtccttttaggtgtgagttacgtcactcaggatgac
atttttctagttttgtacattttcctgcaaaactcaggatgccctcattc
gtaacagctgagtactattccaatgtgtaaatgaaccaaattttctgtat
ccactcttttgtcatgggacatctcagttgtttctagcttctggctacca
caaataaaggccactaagaaaatagtggtacagttgcccctgtggcatgg
ttgtggcatctttttgggtatatttcccaagagtggtaatagcttggtct
ttcaagtagatcttatttccaattttcagaaggaacttcttatttcttga
tgtccagagtggctggtattgtttgcataccacaagcaatggaggactgt
ttccttcttttttccacattctctctccaccatgttgtttgttcactgag
gaatttgatcctagttatctctgactggtataggttaatctcagtcgttt
ggaatgcattctctagtatcctctgaaggacgt

gaattccattgaaaaattaagaacatatagctcaaaatttgctaagtcca
ataagcctttattctttctctaatgcaacttcccctaccgagtcctattc
tcagactgaccctgtaggaaagggttgagggaagttagaattcgtcacgt
tcccttccttcttcctgtgctaacctccagtgataggcaagaatcaatag
gggtttcagcagtttctttgtagacactgaccagctttagaacatccagt
attctgactttcacgtaaaaacatcctgacgctgtgttaaaaagattaaa
cggagatgacacagaagctccgtctgcacacaggctgtactgaaaagctt
tccatagctacattttcttccaacctttctatcccttgagcagttaaaag
tacagaggatttttactttggagtaacacaggactcaacagcaggttgat
ttttctacagagttggtttggctagtgaatttcagaataagattttccag
gtttgggtgaatcatcagactaagtgcagccaacagatcacaacataggg
aagaatgggtgggtgggtggatggcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89581960_89582537
seq2: B6Ng01-254O23.g_69_646

seq1  GAATTCCATTGAAAAATTAAGAACATATAGCTCAAAATTTGCTAAGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGAAAAATTAAGAACATATAGCTCAAAATTTGCTAAGTCCA  50

seq1  ATAAGCCTTTATTCTTTCTCTAATGCAACTTCCCCTACCGAGTCCTATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCTTTATTCTTTCTCTAATGCAACTTCCCCTACCGAGTCCTATTC  100

seq1  TCAGACTGACCCTGTAGGAAAGGGTTGAGGGAAGTTAGAATTCGTCACGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGACCCTGTAGGAAAGGGTTGAGGGAAGTTAGAATTCGTCACGT  150

seq1  TCCCTTCCTTCTTCCTGTGCTAACCTCCAGTGATAGGCAAGAATCAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCCTTCTTCCTGTGCTAACCTCCAGTGATAGGCAAGAATCAATAG  200

seq1  GGGTTTCAGCAGTTTCTTTGTAGACACTGACCAGCTTTAGAACATCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCAGCAGTTTCTTTGTAGACACTGACCAGCTTTAGAACATCCAGT  250

seq1  ATTCTGACTTTCACGTAAAAACATCCTGACGCTGTGTTAAAAAGATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGACTTTCACGTAAAAACATCCTGACGCTGTGTTAAAAAGATTAAA  300

seq1  CGGAGATGACACAGAAGCTCCGTCTGCACACAGGCTGTACTGAAAAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGATGACACAGAAGCTCCGTCTGCACACAGGCTGTACTGAAAAGCTT  350

seq1  TCCATAGCTACATTTTCTTCCAACCTTTCTATCCCTTGAGCAGTTAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGCTACATTTTCTTCCAACCTTTCTATCCCTTGAGCAGTTAAAAG  400

seq1  TACAGAGGATTTTTACTTTGGAGTAACACAGGACTCAACAGCAGGTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGATTTTTACTTTGGAGTAACACAGGACTCAACAGCAGGTTGAT  450

seq1  TTTTCTACAGAGTTGGTTTGGCTAGTGAATTTCAGAATAAGATTTTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACAGAGTTGGTTTGGCTAGTGAATTTCAGAATAAGATTTTCCAG  500

seq1  GTTTGGGTGAATCATCAGACTAAGTGCAGCCAACAGATCACAACATAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTGAATCATCAGACTAAGTGCAGCCAACAGATCACAACATAGGG  550

seq1  AAGAATGGGTGGGTGGGTGGATGGCAGG  578
      ||||||||||||||||||||||||||||
seq2  AAGAATGGGTGGGTGGGTGGATGGCAGG  578


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