BAC Information

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BAC

Clone NameB6Ng01-255I01
Chromosome14 (Build37)
Map Location 20,744,277 - 20,890,070
singlet/doubletdoublet
Overlap geneGng2
Upstream geneLOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534
Downstream gene1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255I01.bB6Ng01-255I01.g
ACCGA061694GA061695
length1,1051,014
definitionB6Ng01-255I01.b B6Ng01-255I01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,888,972 - 20,890,070)(20,744,277 - 20,745,291)
sequence
gaattccatggagcatgttgccaccaaggggcagcatggagctgctgcag
cctgccctatatcccttcacctcacacttgatatttatattaagagaaaa
ccctctggactgcttcttgggaccacttttgctgttctgttttgtttttc
acttcaagattcatagaataaaggcctcctcactggccctggaaaagact
ctgaaagccctcagcagtgatttattatatacatattttaagataaagta
gccccttcctagggttagcaggcagtcttgtaggtctctgtccacttctg
agcttcaagagggttggggcacaatggctaggaacttaaattgctaacaa
aaattggtcgccaaattaaagaaggtaaaaatttgaactcaagtttttga
tttctgttgtgcttttttgaaacagcatttaggctgaagatttagacctc
gttctcaaaaagctgagtgcacagagaaccaggtcataggggacaggtat
tttgggggaggtgtctcagagacagaaatcaatctctgtctctgtctctg
tctctctctctctttgtgtgcgtgtgtgtgaatttctgacatgtacacat
ggatgccagtgtacatgaatgtatatgcttgtggaaggaagccaaaggtt
catatggggtgttgacctcatatttcttgaaacaaagtctcttattgaac
ttggagctcattaattaagctgaccagccagccagctctgggaattcact
gacttagcctccctagctctggagttacaaacacaagcagccttttatgt
ggtgctgaggtctgaactcaggtcctcacctttgtatagcaagcacttta
ccaccgagacatttttccaagccaccagatcactttcaattgtgaatttg
atatattacccgactctcaaatccacaggaagaaatctcaaatacacatg
taactacaatgctgtcctaagactttaggatttgggcctaggaaagcaat
tgaagtcggactttatgagcccatccctagtagagcatggaagccagcag
tgctgtagggttgttggaattgtgaagcccagcctcatttatgttttttc
agagg
gaattctaatcaagtcggcccaggcagaggttctgacactaatcctccag
agggcggtgatctctcaggaagattacagaggctactgcaaaatgaactc
aatccatcctgtcactgcccttagaaaaatggaatgccatttttcagtag
tttcttttctcctggaggtcagtggtgcaacgagtaaaaaagtgtttctt
attcgctcttcttctggcaatatctggggcttcagagaagtggggcacac
tgtctacttactgccctgttcgccacacggcttcggaacactgcacttct
gaaggcctccgttgccccaccccaccatcctgcagctgtctctctcctgc
agcagcttcaaccaactcaaagcctgttctcccagaatatgttctgttgg
atctacttctctttcccccagaattatttcagaggagaaagtttcccact
tgtggataatctcatactggtagagtgaaatatgaactaactcagcatta
aacaggttctcctgggaggccagcatgcagggcagcctttcccggttgtc
tttggagggtcctactctggtaactcttccatctgtctttggagggcaca
ggatggctgggttttagcacccactctgtttcagtgttttcttctggcta
aatgataagagttctaaaatacggttttctccctaaattagccctgttta
gagaatatcagctgttactgataccaagacattttatgcaaaagaaaata
acttagggagaccaggggctggatttcattcattcaccccattaatgctg
ttcaggaaagatgaagaaaaacacataggctcctattctcaagggcaaag
ctcttgagaaaaacacataggctcctattctcaagggcaaaactactaca
gtagtcctatggtattgtccttcaaacgcctcccctctaaaaaaagaccc
accataggtttatcttcagaaaccttatgagctgtgtaatacctccaaca
gtgttcccaaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20888972_20890070
seq2: B6Ng01-255I01.b_46_1150 (reverse)

seq1  CCTCTG---AAACAT-AATGA-GCTGGGCCTCCACAATTCCAAC-ACCCT  44
      ||||||   |||||| ||||| |||||| || |||||||||||| |||||
seq2  CCTCTGAAAAAACATAAATGAGGCTGGG-CTTCACAATTCCAACAACCCT  49

seq1  -CAGCACTGCTGCCTTCCATGCTCCTACTA-GGAT-GGCTCATTAAGTCC  91
       ||||||||||| |||||||||| |||||| |||| ||||||| ||||||
seq2  ACAGCACTGCTGGCTTCCATGCT-CTACTAGGGATGGGCTCATAAAGTCC  98

seq1  GACTTCAATTGCTTTCCTAGGCCAAAATCCTAAAGTCTTAGGACAGCATT  141
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GACTTCAATTGCTTTCCTAGGCCCAAATCCTAAAGTCTTAGGACAGCATT  148

seq1  GTAGTTACATGTGTATTTGAGATTTCTTTCCTGTGGATTTGAGAGTCGGG  191
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTAGTTACATGTGTATTTGAGATTTC-TTCCTGTGGATTTGAGAGTCGGG  197

seq1  TAATATATCAAATTCACAATTGAAAGTGATCTGGTGGCTTGGAAAAATGT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATCAAATTCACAATTGAAAGTGATCTGGTGGCTTGGAAAAATGT  247

seq1  CTCGGTGGTAAAGTGCTTGCTATACAAAGGTGAGGACCTGAGTTCAGACC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTGGTAAAGTGCTTGCTATACAAAGGTGAGGACCTGAGTTCAGACC  297

seq1  TCAGCACCACATAAAAGGCTGCTTGTGTTTGTAACTCCAGAGCTAGGGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACCACATAAAAGGCTGCTTGTGTTTGTAACTCCAGAGCTAGGGAG  347

seq1  GCTAAGTCAGTGAATTCCCAGAGCTGGCTGGCTGGTCAGCTTAATTAATG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTCAGTGAATTCCCAGAGCTGGCTGGCTGGTCAGCTTAATTAATG  397

seq1  AGCTCCAAGTTCAATAAGAGACTTTGTTTCAAGAAATATGAGGTCAACAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAAGTTCAATAAGAGACTTTGTTTCAAGAAATATGAGGTCAACAC  447

seq1  CCCATATGAACCTTTGGCTTCCTTCCACAAGCATATACATTCATGTACAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATGAACCTTTGGCTTCCTTCCACAAGCATATACATTCATGTACAC  497

seq1  TGGCATCCATGTGTACATGTCAGAAATTCACACACACGCACACAAAGAGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCATGTGTACATGTCAGAAATTCACACACACGCACACAAAGAGA  547

seq1  GAGAGAGACAGAGACAGAGACAGAGATTGATTTCTGTCTCTGAGACACCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACAGAGACAGAGACAGAGATTGATTTCTGTCTCTGAGACACCT  597

seq1  CCCCCAAAATACCTGTCCCCTATGACCTGGTTCTCTGTGCACTCAGCTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAAATACCTGTCCCCTATGACCTGGTTCTCTGTGCACTCAGCTTT  647

seq1  TTGAGAACGAGGTCTAAATCTTCAGCCTAAATGCTGTTTCAAAAAAGCAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACGAGGTCTAAATCTTCAGCCTAAATGCTGTTTCAAAAAAGCAC  697

seq1  AACAGAAATCAAAAACTTGAGTTCAAATTTTTACCTTCTTTAATTTGGCG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAATCAAAAACTTGAGTTCAAATTTTTACCTTCTTTAATTTGGCG  747

seq1  ACCAATTTTTGTTAGCAATTTAAGTTCCTAGCCATTGTGCCCCAACCCTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTTTTGTTAGCAATTTAAGTTCCTAGCCATTGTGCCCCAACCCTC  797

seq1  TTGAAGCTCAGAAGTGGACAGAGACCTACAAGACTGCCTGCTAACCCTAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTCAGAAGTGGACAGAGACCTACAAGACTGCCTGCTAACCCTAG  847

seq1  GAAGGGGCTACTTTATCTTAAAATATGTATATAATAAATCACTGCTGAGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGCTACTTTATCTTAAAATATGTATATAATAAATCACTGCTGAGG  897

seq1  GCTTTCAGAGTCTTTTCCAGGGCCAGTGAGGAGGCCTTTATTCTATGAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGAGTCTTTTCCAGGGCCAGTGAGGAGGCCTTTATTCTATGAAT  947

seq1  CTTGAAGTGAAAAACAAAACAGAACAGCAAAAGTGGTCCCAAGAAGCAGT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTGAAAAACAAAACAGAACAGCAAAAGTGGTCCCAAGAAGCAGT  997

seq1  CCAGAGGGTTTTCTCTTAATATAAATATCAAGTGTGAGGTGAAGGGATAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGGTTTTCTCTTAATATAAATATCAAGTGTGAGGTGAAGGGATAT  1047

seq1  AGGGCAGGCTGCAGCAGCTCCATGCTGCCCCTTGGTGGCAACATGCTCCA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGGCTGCAGCAGCTCCATGCTGCCCCTTGGTGGCAACATGCTCCA  1097

seq1  TGGAATTC  1099
      ||||||||
seq2  TGGAATTC  1105

seq1: chr14_20744277_20745291
seq2: B6Ng01-255I01.g_65_1078

seq1  GAATTCTAATCAAGTCGGCCCAGGCAGAGGTTCTGACACTAATCCTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCAAGTCGGCCCAGGCAGAGGTTCTGACACTAATCCTCCAG  50

seq1  AGGGCGGTGATCTCTCAGGAAGATTACAGAGGCTACTGCAAAATGAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGGTGATCTCTCAGGAAGATTACAGAGGCTACTGCAAAATGAACTC  100

seq1  AATCCATCCTGTCACTGCCCTTAGAAAAATGGAATGCCATTTTTCAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATCCTGTCACTGCCCTTAGAAAAATGGAATGCCATTTTTCAGTAG  150

seq1  TTTCTTTTCTCCTGGAGGTCAGTGGTGCAACGAGTAAAAAAGTGTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTCCTGGAGGTCAGTGGTGCAACGAGTAAAAAAGTGTTTCTT  200

seq1  ATTCGCTCTTCTTCTGGCAATATCTGGGGCTTCAGAGAAGTGGGGCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCTCTTCTTCTGGCAATATCTGGGGCTTCAGAGAAGTGGGGCACAC  250

seq1  TGTCTACTTACTGCCCTGTTCGCCACACGGCTTCGGAACACTGCACTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACTTACTGCCCTGTTCGCCACACGGCTTCGGAACACTGCACTTCT  300

seq1  GAAGGCCTCCGTTGCCCCACCCCACCATCCTGCAGCTGTCTCTCTCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTCCGTTGCCCCACCCCACCATCCTGCAGCTGTCTCTCTCCTGC  350

seq1  AGCAGCTTCAACCAACTCAAAGCCTGTTCTCCCAGAATATGTTCTGTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTTCAACCAACTCAAAGCCTGTTCTCCCAGAATATGTTCTGTTGG  400

seq1  ATCTACTTCTCTTTCCCCCAGAATTATTTCAGAGGAGAAAGTTTCCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTCTCTTTCCCCCAGAATTATTTCAGAGGAGAAAGTTTCCCACT  450

seq1  TGTGGATAATCTCATACTGGTAGAGTGAAATATGAACTAACTCAGCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATAATCTCATACTGGTAGAGTGAAATATGAACTAACTCAGCATTA  500

seq1  AACAGGTTCTCCTGGGAGGCCAGCATGCAGGGCAGCCTTTCCCGGTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTTCTCCTGGGAGGCCAGCATGCAGGGCAGCCTTTCCCGGTTGTC  550

seq1  TTTGGAGGGTCCTACTCTGGTAACTCTTCCATCTGTCTTTGGAGGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGGTCCTACTCTGGTAACTCTTCCATCTGTCTTTGGAGGGCACA  600

seq1  GGATGGCTGGGTTTTAGCACCCACTCTGTTTCAGTGTTTTCTTCTGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTGGGTTTTAGCACCCACTCTGTTTCAGTGTTTTCTTCTGGCTA  650

seq1  AATGATAAGAGTTCTAAAATACGGTTTTCTCCCTAAATTAGCCCTGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAGAGTTCTAAAATACGGTTTTCTCCCTAAATTAGCCCTGTTTA  700

seq1  GAGAATATCAGCTGTTACTGATACCAAGACATTTTATGCAAAAGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATCAGCTGTTACTGATACCAAGACATTTTATGCAAAAGAAAATA  750

seq1  ACTTAGGGAGACCAGGGGCTGGATTTCATTCATTCACCCCATTAATGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGGAGACCAGGGGCTGGATTTCATTCATTCACCCCATTAATGCTG  800

seq1  TTCAGGAAAGATGAAGAAAAACACATAGGCTCCTATTCTCAAGGGCAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAAAGATGAAGAAAAACACATAGGCTCCTATTCTCAAGGGCAAAG  850

seq1  CTCTTGAGAAAAACACATAGGCTCCTATTCTCAAGGGCAAAACTACTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGAAAAACACATAGGCTCCTATTCTCAAGGGCAAAACTACTACA  900

seq1  GTAGTCCTATGGTATTGTCCTTCAAACGCCTCCCCCTCTAAAAAAAGACC  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTAGTCCTATGGTATTGTCCTTCAAACGCCT-CCCCTCTAAAAAAAGACC  949

seq1  CACCATAGGTTTATCTTTCAAGAAACCTTATGAGCTGTTGTATACCTCC-  999
      |||||||||||||||||   ||||||||||||||||||   |||||||| 
seq2  CACCATAGGTTTATCTT--CAGAAACCTTATGAGCTGTGTAATACCTCCA  997

seq1  ACAGTG-TCCCAACCCT  1015
      |||||| ||||||||||
seq2  ACAGTGTTCCCAACCCT  1014