BAC Information

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BAC

Clone NameB6Ng01-255I07
Chromosome14 (Build37)
Map Location 44,771,480 - 44,772,623
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik
Downstream geneEG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255I07.bB6Ng01-255I07.g
ACCGA061706GA061707
length8971,145
definitionB6Ng01-255I07.b B6Ng01-255I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaggatggcctttgcttcagtctcagttccacagcttgtctcc
acatttcctcctgtgattcttttgttcacccttctatgacattttttttg
ttattctaaatgaatttgcaaattgcttttctaagtataagaacaattga
tttggaattttgatggggattgctttgaatctgcagatgcatgatgacca
tttttactatattaatcctgccaatccatgagaaggggagatctttctac
cttctgagatgttctttgatttctttcttcagagacttgaagttcttgtc
atacagatatttcacttgcctggttagagtctccttcaaggtattttctt
ttgtttgtgactattgagaaggatgtggtttccctaatttctttctcggg
ctgtttattttttgagtaaaataaggatactaatttgtttgatataattc
atatccagccactgtactgaagttgtatatcaggttgagcagttctctgg
tggacagtgcttctaaccattggttgtgtgctgacccctgtggttgaatt
atggaaagccgctaacccctgttgttggaaagctggataaagctgaggag
ggggcgggggggggcaaccctgttggaggacaagaacactcagtaaacct
ggaccctggagatctctcagacgctgcaattccaaccagggtgcatacaa
ccgctgttatgaggcccccaaaatatatacagcagaggactgccaggtct
ggattcagtcagagaaaattcacataagcctcaagagaatggaggcccta
gagagttcaaaggtctggtgggtgtgggggtggggacatcctgtggacac
aggtggttaggggttgtggtatggaatatggacctcgcgtattacta
gaattcacatgatccttcaggcctgtgtcatggagtagcttcagtgacta
gaagaatgggttagatttatttcctatactcaaagcaggcagaaaaggat
gaaagtcctccatgtaatatcaaatatatctagaggagggtgctagattg
ccatccagtaccaaagacatccagagagcatcttaagatcaaagtcagct
tgtgttgtagccctaggagcaaggaggaggagtctgcatcctgatgccct
cttctgacagtcagaatgaaattaaggaactcttgcagagcagacgcagc
cttgacatttcctgctctctgtcaaacaaactgcttcccagaatctccaa
gctcctgattcccattactggaagtccaagttcaagcccaccttctctag
gaagttccctctttcatgcccaggattcacagtgacttcccccaggacca
ttaattcttgctatttaacactaagaccaaaggccatcttgtggctgcct
ctttctgttctctgtatgttcattgttctctcctccaagaggcctgctca
gttttgtcagcatgtctaagggtgaaccataaaggtagttaatgaatgct
ccaatagcagttggagtcaccacattagtaacatgacagaaaatgccagg
gctctccaggttacaacacaacatctagggaagggacttctgatgtcaca
caggtcagctcttaccttcctgctcagtacctcacccaaatttacctgaa
gtcaaagtgccttttccagagtgtgggatagattgccttttggtactcaa
aatattaaaaggtggctatcaatcaccttccaatgacaaacgtatccaga
agagatcctttggatccccatgcaaatacacatgaaatacccagactcca
gaataagacactaggcaatactcaacacatctagataaagtgtgatagat
cccctttgcagtactgaaactatccagaagaggttaatacacgtccaggc
cagtttctatgctgtgacgactgacctggacagaatgggaaaatgtcaca
ctatgacaaaggtatggttattgttggcaaggtgtctggaagaattttat
ggtggaggaatgcagcccagctgtattgccaggaaacaaaactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44771480_44772623
seq2: B6Ng01-255I07.g_66_1210 (reverse)

seq1  CCAGTTTTTGTTTTCCTGCAATAACAAGCTGGGCTGCAATTCTC--ACAT  48
      |||| |||||||| |  ||||||   |||||||||||| | |||   |||
seq2  CCAG-TTTTGTTTCCTGGCAATA--CAGCTGGGCTGCATTCCTCCACCAT  47

seq1  AAAA-TCTTCCAGAACACCTGGCCAAC-ATAACCATACTTTGGTCATTAG  96
      |||| |||||||| |||||| |||||| |||||||||| || |||| |||
seq2  AAAATTCTTCCAG-ACACCTTGCCAACAATAACCATACCTTTGTCA-TAG  95

seq1  TGGTGACATTTT-CCATTCTGTCCAGGTCAGTCGTCACAGCATAGAAACT  145
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  T-GTGACATTTTCCCATTCTGTCCAGGTCAGTCGTCACAGCATAGAAACT  144

seq1  GG-CTGGACGTGTATTAACCTCTTCTGGATAGTTTCAGTACTGC-AAGGG  193
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGCCTGGACGTGTATTAACCTCTTCTGGATAGTTTCAGTACTGCAAAGGG  194

seq1  GATCTATCACACTTTATCTAGATGTGTTGAGTATTGCCTAGTGTCTTATT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATCACACTTTATCTAGATGTGTTGAGTATTGCCTAGTGTCTTATT  244

seq1  CTGGAGTCTGGGTATTTCATGTGTATTTGCATGGGGATCCAAAGGATCTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCTGGGTATTTCATGTGTATTTGCATGGGGATCCAAAGGATCTC  294

seq1  TTCTGGATACGTTTGTCATTGGAAGGTGATTGATAGCCACCTTTTAATAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATACGTTTGTCATTGGAAGGTGATTGATAGCCACCTTTTAATAT  344

seq1  TTTGAGTACCAAAAGGCAATCTATCCCACACTCTGGAAAAGGCACTTTGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTACCAAAAGGCAATCTATCCCACACTCTGGAAAAGGCACTTTGA  394

seq1  CTTCAGGTAAATTTGGGTGAGGTACTGAGCAGGAAGGTAAGAGCTGACCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGTAAATTTGGGTGAGGTACTGAGCAGGAAGGTAAGAGCTGACCT  444

seq1  GTGTGACATCAGAAGTCCCTTCCCTAGATGTTGTGTTGTAACCTGGAGAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACATCAGAAGTCCCTTCCCTAGATGTTGTGTTGTAACCTGGAGAG  494

seq1  CCCTGGCATTTTCTGTCATGTTACTAATGTGGTGACTCCAACTGCTATTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCATTTTCTGTCATGTTACTAATGTGGTGACTCCAACTGCTATTG  544

seq1  GAGCATTCATTAACTACCTTTATGGTTCACCCTTAGACATGCTGACAAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTCATTAACTACCTTTATGGTTCACCCTTAGACATGCTGACAAAA  594

seq1  CTGAGCAGGCCTCTTGGAGGAGAGAACAATGAACATACAGAGAACAGAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGGCCTCTTGGAGGAGAGAACAATGAACATACAGAGAACAGAAA  644

seq1  GAGGCAGCCACAAGATGGCCTTTGGTCTTAGTGTTAAATAGCAAGAATTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGCCACAAGATGGCCTTTGGTCTTAGTGTTAAATAGCAAGAATTA  694

seq1  ATGGTCCTGGGGGAAGTCACTGTGAATCCTGGGCATGAAAGAGGGAACTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCCTGGGGGAAGTCACTGTGAATCCTGGGCATGAAAGAGGGAACTT  744

seq1  CCTAGAGAAGGTGGGCTTGAACTTGGACTTCCAGTAATGGGAATCAGGAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAGAAGGTGGGCTTGAACTTGGACTTCCAGTAATGGGAATCAGGAG  794

seq1  CTTGGAGATTCTGGGAAGCAGTTTGTTTGACAGAGAGCAGGAAATGTCAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGATTCTGGGAAGCAGTTTGTTTGACAGAGAGCAGGAAATGTCAA  844

seq1  GGCTGCGTCTGCTCTGCAAGAGTTCCTTAATTTCATTCTGACTGTCAGAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCGTCTGCTCTGCAAGAGTTCCTTAATTTCATTCTGACTGTCAGAA  894

seq1  GAGGGCATCAGGATGCAGACTCCTCCTCCTTGCTCCTAGGGCTACAACAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCATCAGGATGCAGACTCCTCCTCCTTGCTCCTAGGGCTACAACAC  944

seq1  AAGCTGACTTTGATCTTAAGATGCTCTCTGGATGTCTTTGGTACTGGATG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACTTTGATCTTAAGATGCTCTCTGGATGTCTTTGGTACTGGATG  994

seq1  GCAATCTAGCACCCTCCTCTAGATATATTTGATATTACATGGAGGACTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTAGCACCCTCCTCTAGATATATTTGATATTACATGGAGGACTTT  1044

seq1  CATCCTTTTCTGCCTGCTTTGAGTATAGGAAATAAATCTAACCCATTCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTTCTGCCTGCTTTGAGTATAGGAAATAAATCTAACCCATTCTT  1094

seq1  CTAGTCACTGAAGCTACTCCATGACACAGGCCTGAAGGATCATGTGAATT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCACTGAAGCTACTCCATGACACAGGCCTGAAGGATCATGTGAATT  1144

seq1  C  1144
      |
seq2  C  1145