BAC Information

Click to search

BAC

Clone NameB6Ng01-255M22
Chromosome14 (Build37)
Map Location 83,992,797 - 83,993,405
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773
Downstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255M22.bB6Ng01-255M22.g
ACCGA061924GA061925
length287611
definitionB6Ng01-255M22.b B6Ng01-255M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agggaacccttttggaagacttaggggatggaatgaaggagatgaaggag
attgagactccataggaagaacaacagtatgaactaacacttcagagatt
ccagggactaaactaccaatcaaagaatatacatgggctggtccgtggct
ctgactacacatggagcagaggactgcctagtctgtccagtgggagcaga
catacttggtcctgtggaagcttgatgaaccaacgaaggggatgtaagag
gggtgaggtatgagtgggtgggtgagcccctcgcgat

gaattctctgccacagaaatattttagaaaacttcagggaattactggta
acatatttttttgactataggatttattagtatttttatttctgaatagt
ccaattattttcatcctctacccctatgttaccatttcatttaggccttt
gatctggagtgtgataatctttataataagtttatagagaaataataaga
ctaactaaattcagaaatacaacaaacagcatttaatgttgcactgaaaa
aaaaaatcccaccagcccaacacattaaaaaaaatacatgttttgtgaag
cttttggagaaatttgcatgtaaactttaacatgtgctaaaataccatgt
gtttaattcaaaaattaaatttcaattttgagatgggtggttgggcccaa
ccctcagctgggggccatgtctatctactggaggtggtcccttcagcttc
tatcttcctacttgaatggtaaaaaatttactcctgataaaattagcata
ttctatatgtaaatagacagaaaaccaaaatgacagacttcatatgcact
cactgataactgaatattacgtaaagaatttcagaatacccatcattatg
gaaccccaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83992797_83993405
seq2: B6Ng01-255M22.g_66_676

seq1  GAATTCTCTGCCACAGAAATATTTTAGAAAACTTCAGGGAATTACTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCACAGAAATATTTTAGAAAACTTCAGGGAATTACTGGTA  50

seq1  ACATATTTTTTTGACTATAGGATTTATTAGTATTTTTATTTCTGAATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTTTTGACTATAGGATTTATTAGTATTTTTATTTCTGAATAGT  100

seq1  CCAATTATTTTCATCCTCTACCCCTATGTTACCATTTCATTTAGGCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTATTTTCATCCTCTACCCCTATGTTACCATTTCATTTAGGCCTTT  150

seq1  GATCTGGAGTGTGATAATCTTTATAATAAGTTTATAGAGAAATAATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGAGTGTGATAATCTTTATAATAAGTTTATAGAGAAATAATAAGA  200

seq1  CTAACTAAATTCAGAAATACAACAAACAGCATTTAATGTTGCACTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAAATTCAGAAATACAACAAACAGCATTTAATGTTGCACTGAAAA  250

seq1  AAAAAATCCCACCAGCCCAACACATTAAAAAAAATACATGTTTTGTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCCCACCAGCCCAACACATTAAAAAAAATACATGTTTTGTGAAG  300

seq1  CTTTTGGAGAAATTTGCATGTAAACTTTAACATGTGCTAAAATACCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGAGAAATTTGCATGTAAACTTTAACATGTGCTAAAATACCATGT  350

seq1  GTTTAATTCAAAAATTAAATTTCAATTTTGAGATGGGTGGTTGGGCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTTTAATTCAAAAATTAAATTTCAATTTTGAGATGGGTGGTTGGGCCCAA  400

seq1  CCCTCAGCTGGGGGCCATGTCTATCTACTGGAGGTGGTCCCTTCAGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGCTGGGGGCCATGTCTATCTACTGGAGGTGGTCCCTTCAGCTTC  450

seq1  TATCTTCCTACTTGAATGGTAAAAAATTTAGTCCTGATAAAATTAGCATA  500
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATCTTCCTACTTGAATGGTAAAAAATTTACTCCTGATAAAATTAGCATA  500

seq1  TTCTATATGTAAATAGACAGAAAACCAAAATGACAGACATAATATGCACT  550
      |||||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TTCTATATGTAAATAGACAGAAAACCAAAATGACAGACTTCATATGCACT  550

seq1  CACTGATAAGTGAATATTAGGTAAAG-ACTTCAGAATACCCATC-TTATG  598
      ||||||||| ||||||||| |||||| | ||||||||||||||| |||||
seq2  CACTGATAACTGAATATTACGTAAAGAATTTCAGAATACCCATCATTATG  600

seq1  GTACCCCAACC  609
      | |||||||||
seq2  GAACCCCAACC  611


| Home | SequenceCutter | Blast | Download |