BAC Information

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BAC

Clone NameB6Ng01-255O08
Chromosome14 (Build37)
Map Location 53,343,986 - 53,344,538
singlet/doubletsinglet
Overlap genenone
Upstream geneEar-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612
Downstream geneLOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255O08.bB6Ng01-255O08.g
ACCGA061992GA061993
length9921,041
definitionB6Ng01-255O08.b B6Ng01-255O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttggtttggggggtctaacttctagagactttattttat
gtacattacatcaatctaaagaacttaagcaatggttaaaacataagaat
tgactgtcatcattcttatgattctacctgacatgaaagagttgtagcag
agcaactgatggatattctggtttgggatttaccatatgataaactgaat
ggcaagatataggttttaccaatttattttcactgatccaaactagtagt
aggatactatatggccttggactgatggcttagcacttaaaagcacttgt
tgctctctcagaggactgagttttggtttgcagaaccaaactcagtggtt
caaaacaatctgttaactacagttccacaggaactgatcccctcttgtga
cctctctgggcaacaggtacacacatgatacataaacacaaatgaaggca
agccatccatgtacataaaataagagtgaatactttttaaattttcttta
tttgttgtgtccggtcagtggttcacatgtctgggttctgttctgagaaa
gcatcttagaatctgaaagagaagagggagctaggtggcacgagagaaag
atgaaaccaagacagtcattctgatcaaggttcaattttaatgtcagcaa
acacgctttataagaaagaggggaggcccatttctagccaagtaaagttc
ttttgaagtagacagattaaccttttagtgggaactcatgaagataacag
ttcgggtgctaactctggaaaatctttggaagagaaaccggttagcctca
gacaggtagtggcacatcaaaggagcagcacagcatgtggctccgcttaa
gcagtggatggacacagccagccttgctagctggaaggaggtaacatttc
cccccttttaaataatattaacaaaactggactgagcaaaaaatttattt
tatgcttctattattctgcctggaattcttagggtctaaatg
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtgattttgtctttg
agtttgtttatataatggattacattgatggattttcgtatattaaacca
tccctgcatccctggaataaaacctacttggtcaggatggatgattgctt
taatgtgttcttggattcggttagcgagaattttattgaggatttttgca
tcgatattcataagagaaattggtctgaagttctctatctttgttggatc
tttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttgg
gtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgga
attagatcttctttgaaggtctgatagaactctgcactaaacccatctgg
tcctgggctttttttggttgggagactattaataactgcttctatttctt
taggtgatatgggactgtttagatggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcatccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcagcatctgttgttatgtctcccttttcagttctgattttgttaatt
aggattttgtctctgtgccctttagtgagtctagctaaggatttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttggggtgaatttgcttccttttttttctagg
gcttttagatgtgatggtcaagctgctagtatgtggctggtctcccgttt
cttccttggagcactcagagctatgagttccctcttagaatgcttcattg
ttgtccataggttgggtaccgtggggcttcttttcattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53343986_53344538
seq2: B6Ng01-255O08.b_48_600 (reverse)

seq1  TGCTTTCTCAGAACAGAACCCAGACATGTGAACCACTGACCGGACACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTCAGAACAGAACCCAGACATGTGAACCACTGACCGGACACAAC  50

seq1  AAATAAAGAAAATTTAAAAAGTATTCACTCTTATTTTATGTACATGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGAAAATTTAAAAAGTATTCACTCTTATTTTATGTACATGGATG  100

seq1  GCTTGCCTTCATTTGTGTTTATGTATCATGTGTGTACCTGTTGCCCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTTCATTTGTGTTTATGTATCATGTGTGTACCTGTTGCCCAGAG  150

seq1  AGGTCACAAGAGGGGATCAGTTCCTGTGGAACTGTAGTTAACAGATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACAAGAGGGGATCAGTTCCTGTGGAACTGTAGTTAACAGATTGTT  200

seq1  TTGAACCACTGAGTTTGGTTCTGCAAACCAAAACTCAGTCCTCTGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCACTGAGTTTGGTTCTGCAAACCAAAACTCAGTCCTCTGAGAGA  250

seq1  GCAACAAGTGCTTTTAAGTGCTAAGCCATCAGTCCAAGGCCATATAGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAAGTGCTTTTAAGTGCTAAGCCATCAGTCCAAGGCCATATAGTAT  300

seq1  CCTACTACTAGTTTGGATCAGTGAAAATAAATTGGTAAAACCTATATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTACTAGTTTGGATCAGTGAAAATAAATTGGTAAAACCTATATCTT  350

seq1  GCCATTCAGTTTATCATATGGTAAATCCCAAACCAGAATATCCATCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCAGTTTATCATATGGTAAATCCCAAACCAGAATATCCATCAGTT  400

seq1  GCTCTGCTACAACTCTTTCATGTCAGGTAGAATCATAAGAATGATGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTACAACTCTTTCATGTCAGGTAGAATCATAAGAATGATGACAG  450

seq1  TCAATTCTTATGTTTTAACCATTGCTTAAGTTCTTTAGATTGATGTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTTATGTTTTAACCATTGCTTAAGTTCTTTAGATTGATGTAATG  500

seq1  TACATAAAATAAAGTCTCTAGAAGTTAGACCCCCCAAACCAAACAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAATAAAGTCTCTAGAAGTTAGACCCCCCAAACCAAACAAAGAA  550

seq1  TTC  553
      |||
seq2  TTC  553