BAC Information

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BAC

Clone NameB6Ng01-256E13
Chromosome14 (Build37)
Map Location 125,000,613 - 125,082,299
singlet/doubletdoublet
Overlap geneFgf14
Upstream geneVgcnl1, Itgbl1, LOC668700, GA_x5J8B7W4W3R-189177-188236
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256E13.bB6Ng01-256E13.g
ACCGA062282GA062283
length1,057884
definitionB6Ng01-256E13.b B6Ng01-256E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,000,613 - 125,001,671)(125,081,417 - 125,082,299)
sequence
gaattctttaatctttaactcattgttgatgtctctaagaatgggcaaaa
cataggtctggatgtttataaagtgcttgcctaacatacatgagccatgt
tagaacacaccagcatagcacaaaccaagcatagtggctcttatctatat
ccctagcacttaggaggtagagtaaagaggaataaataggacatcaaggt
catcttcatctacattgcaaatttgaggctagcccatgacacatgataca
ccatttgagaggaaagcacttttttaaggtgataatcagaagctgaagag
atggtttagcagttaggagcacaagatggtcttgcagaggacccagattt
catccccaacacccacacagtggctcacatgcacctgtaactactgttcc
aagggatctgatgcccttttctgacctccatagtgtccaagaacacatgt
gatgaatagtcatatatgcaagcaaaatattagtacaataaaaataaaga
taaaattaagacaaagaaaaagatagatgccattatcaagtataacagtt
gatatacagtttcctcattattaagcataactctgaccattatgttttct
tctcactttcctctctcattcttgagccagccatattatgtaacccatga
tcttattactcttcatatagtctcgcccacccttttatgtccttaattct
caactcaccagcccaaattccatgattatcatctcattactacactcttt
ttggaaaataatgaccacaattaaactcaacttttccaaatctgctttac
gaatattaagcctggcttgaacaatttcttcatctttgaacttgaaccta
taagcacatctgttgctctcattttaaacatatgtcacttgacccaagtg
agccttcagtgttggcagatcagaaatcagagacatgttccagacattct
attctgcattccctattttgatttcaacaagcctcctccacttgtatgca
caaatcaagatagagtgctttttagtgagaacatgggagccaccagaatg
aaatgcc

gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgtattggatattagtc
ccctatccgatttgggatagataaatatcctttcccaatctgttggtggc
ctttttgtcttattgacggtgtcttttgccttgcagaagctttgcaattt
tatgaggtctagggtgggtttctaattcaggctttgttgtcactcccaga
tgtgtgggtcaggataacatccagttttggtgggaaatgaagctttgtgc
cacattgacaaaagaagcacatatttctgggggctcatgagattcctgct
ttcctttgtatttctcgacatgtttttcatggttttgttaacacattctt
tgaacataatgggaacaaaaagaaaaattttcttatattattttctatac
ttgtagtcaaaaaagtcataattagttttttcttctccccttcacattct
gaatttagatgcaattaagaaaaatggccatatgagagagaaggatgaaa
ataaaactattgacattttactgacaaggtttatttatttatttatttat
ttatctatctatttatttatttttctgacaaggatttttttattagatat
tttcctgtatttacatttcaaatgttatcccctttcctctgaaagtttcc
cctctgaaaatcccctatccctttccccctccccttgctccccaacccac
ccactcccattcctggtcctggcattcccctacactgtggcatagaacct
tcacaggaccaaagggcctctcctcccattgatgaccgactaagccatct
ctgctagataaccagctaggaccactagatccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_125000613_125001671
seq2: B6Ng01-256E13.b_47_1103

seq1  GAATTCTTTAATCTTTAACTCATTGTTGATGTCTCTAAGAATGGGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATCTTTAACTCATTGTTGATGTCTCTAAGAATGGGCAAAA  50

seq1  CATAGGTCTGGATGTTTATAAAGTGCTTGCCTAACATACATGAGCCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTCTGGATGTTTATAAAGTGCTTGCCTAACATACATGAGCCATGT  100

seq1  TAGAACACACCAGCATAGCACAAACCAAGCATAGTGGCTCTTATCTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACACCAGCATAGCACAAACCAAGCATAGTGGCTCTTATCTATAT  150

seq1  CCCTAGCACTTAGGAGGTAGAGTAAAGAGGAATAAATAGGACATCAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCACTTAGGAGGTAGAGTAAAGAGGAATAAATAGGACATCAAGGT  200

seq1  CATCTTCATCTACATTGCAAATTTGAGGCTAGCCCATGACACATGATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCATCTACATTGCAAATTTGAGGCTAGCCCATGACACATGATACA  250

seq1  CCATTTGAGAGGAAAGCACTTTTTTAAGGTGATAATCAGAAGCTGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGAGAGGAAAGCACTTTTTTAAGGTGATAATCAGAAGCTGAAGAG  300

seq1  ATGGTTTAGCAGTTAGGAGCACAAGATGGTCTTGCAGAGGACCCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTAGCAGTTAGGAGCACAAGATGGTCTTGCAGAGGACCCAGATTT  350

seq1  CATCCCCAACACCCACACAGTGGCTCACATGCACCTGTAACTACTGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAACACCCACACAGTGGCTCACATGCACCTGTAACTACTGTTCC  400

seq1  AAGGGATCTGATGCCCTTTTCTGACCTCCATAGTGTCCAAGAACACATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATCTGATGCCCTTTTCTGACCTCCATAGTGTCCAAGAACACATGT  450

seq1  GATGAATAGTCATATATGCAAGCAAAATATTAGTACAATAAAAATAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAGTCATATATGCAAGCAAAATATTAGTACAATAAAAATAAAGA  500

seq1  TAAAATTAAGACAAAGAAAAAGATAGATGCCATTATCAAGTATAACAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAAGACAAAGAAAAAGATAGATGCCATTATCAAGTATAACAGTT  550

seq1  GATATACAGTTTCCTCATTATTAAGCATAACTCTGACCATTATGTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAGTTTCCTCATTATTAAGCATAACTCTGACCATTATGTTTTCT  600

seq1  TCTCACTTTCCTCTCTCATTCTTGAGCCAGCCATATTATGTAACCCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTTCCTCTCTCATTCTTGAGCCAGCCATATTATGTAACCCATGA  650

seq1  TCTTATTACTCTTCATATAGTCTCGCCCACCCTTTTATGTCCTTAATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTACTCTTCATATAGTCTCGCCCACCCTTTTATGTCCTTAATTCT  700

seq1  CAACTCACCAGCCCAAATTCCATGATTATCATCTCATTACTACACTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACCAGCCCAAATTCCATGATTATCATCTCATTACTACACTCTTT  750

seq1  TTGGAAAATAATGACCACAATTAAACTCAACTTTTCCAAATCTGCTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAATAATGACCACAATTAAACTCAACTTTTCCAAATCTGCTTTAC  800

seq1  GAATATTAAGCCTGGCTTGAACAATTTCTTCATCTTTGAACTTGAACCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTAAGCCTGGCTTGAACAATTTCTTCATCTTTGAACTTGAACCTA  850

seq1  TAAGCACATCTGTTGCTCTCATTTTAAACATATGTCACTTGACCCAAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACATCTGTTGCTCTCATTTTAAACATATGTCACTTGACCCAAGTG  900

seq1  AGCCTTCAGTGTTGGCAGATCAGAAATCAGAGACATGTTCCAGACATTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAGTGTTGGCAGATCAGAAATCAGAGACATGTTCCAGACATTCT  950

seq1  ATTCTGCATTCCCTATTTTGATTTCAAACAAAGCCTCCTCCACTTGTATG  1000
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  ATTCTGCATTCCCTATTTTGATTTCAA--CAAGCCTCCTCCACTTGTATG  998

seq1  CACAAATCAAGATAAGAGTGCTTTTTAGTGAGAACATGGGAGCCACCAGA  1050
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACAAATCAAGAT-AGAGTGCTTTTTAGTGAGAACATGGGAGCCACCAGA  1047

seq1  ATG-AATGCC  1059
      ||| ||||||
seq2  ATGAAATGCC  1057


seq1: chr14_125081417_125082299
seq2: B6Ng01-256E13.g_62_945 (reverse)

seq1  GTGGATCTTGTGGTTCTAGCTGTATGTGTAGCAGAGATGGCCTAGTCGGT  50
      |||||||| ||||| |||||||  | | ||||||||||||| ||||||||
seq2  GTGGATCTAGTGGTCCTAGCTGGTTATCTAGCAGAGATGGCTTAGTCGGT  50

seq1  CATCAATGGGAGGAGAGGCCC-TTGGTCCTGTGAAGGTTCTATGCCACAG  99
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATCAATGGGAGGAGAGGCCCTTTGGTCCTGTGAAGGTTCTATGCCACAG  100

seq1  TGTAGGGGAATGCCAGGACCAGGAATGGGAGTGGGTGGGTTGGGGAGCAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGGGAATGCCAGGACCAGGAATGGGAGTGGGTGGGTTGGGGAGCAA  150

seq1  GGGGAGGGGGAAAGGGATAGGGGATTTTCAGAGGGGAAACTTTCAGAGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGGGAAAGGGATAGGGGATTTTCAGAGGGGAAACTTTCAGAGGA  200

seq1  AAGGGGATAACATTTGAAATGTAAATACAGGAAAATATCTAATAAAAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGATAACATTTGAAATGTAAATACAGGAAAATATCTAATAAAAAAA  250

seq1  TCCTTGTCAGAAAAATAAATAAATAGATAGATAAATAAATAAATAAATAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCAGAAAAATAAATAAATAGATAGATAAATAAATAAATAAATAA  300

seq1  ATAAACCTTGTCAGTAAAATGTCAATAGTTTTATTTTCATCCTTCTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTTGTCAGTAAAATGTCAATAGTTTTATTTTCATCCTTCTCTCT  350

seq1  CATATGGCCATTTTTCTTAATTGCATCTAAATTCAGAATGTGAAGGGGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGCCATTTTTCTTAATTGCATCTAAATTCAGAATGTGAAGGGGAG  400

seq1  AAGAAAAAACTAATTATGACTTTTTTGACTACAAGTATAGAAAATAATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAACTAATTATGACTTTTTTGACTACAAGTATAGAAAATAATAT  450

seq1  AAGAAAATTTTTCTTTTTGTTCCCATTATGTTCAAAGAATGTGTTAACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTTTTCTTTTTGTTCCCATTATGTTCAAAGAATGTGTTAACAA  500

seq1  AACCATGAAAAACATGTCGAGAAATACAAAGGAAAGCAGGAATCTCATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGAAAAACATGTCGAGAAATACAAAGGAAAGCAGGAATCTCATGA  550

seq1  GCCCCCAGAAATATGTGCTTCTTTTGTCAATGTGGCACAAAGCTTCATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCAGAAATATGTGCTTCTTTTGTCAATGTGGCACAAAGCTTCATTT  600

seq1  CCCACCAAAACTGGATGTTATCCTGACCCACACATCTGGGAGTGACAACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAAAACTGGATGTTATCCTGACCCACACATCTGGGAGTGACAACA  650

seq1  AAGCCTGAATTAGAAACCCACCCTAGACCTCATAAAATTGCAAAGCTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGAATTAGAAACCCACCCTAGACCTCATAAAATTGCAAAGCTTCT  700

seq1  GCAAGGCAAAAGACACCGTCAATAAGACAAAAAGGCCACCAACAGATTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCAAAAGACACCGTCAATAAGACAAAAAGGCCACCAACAGATTGG  750

seq1  GAAAGGATATTTATCTATCCCAAATCGGATAGGGGACTAATATCCAATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATATTTATCTATCCCAAATCGGATAGGGGACTAATATCCAATAC  800

seq1  ATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCAT  850

seq1  TAAAAAATGGGGCTCAGAGCTGAACAAAGAATTC  883
      ||||||||||||||||||||||||||||||||||
seq2  TAAAAAATGGGGCTCAGAGCTGAACAAAGAATTC  884


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