BAC Information

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BAC

Clone NameB6Ng01-256L18
Chromosome14 (Build37)
Map Location 85,057,397 - 85,058,144
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
Downstream geneLOC629794, LOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256L18.bB6Ng01-256L18.g
ACCGA062618GA062619
length7451,152
definitionB6Ng01-256L18.b B6Ng01-256L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaagaaaatgcttagcaaatatctcccttctcttacccagta
agtggaaaacaaggcttagaatgtttgcattgcatagaggttccctgata
tttcagagtccttttactcaagtgaatacacaagagaaatgatgtccatt
tattcagaaacttggaattgtatttttcgcctttgtgatttgaaagaaac
agatcccaaagctcagctaggtaggatacgtcaatgtaagaaaaacagga
cttaaacacaatattcaaagtaccgtagagcaatctagatagatagatga
tagatagatagatagatagatagatagatagatagatagatagatagata
gatagatagatagatagatctcaggttgagatacatgggaaaggttggaa
gaaaaggtgaggaattatttaattatttaatattttataaataaatattt
aaatgttataaacactaattttttaatctttaaagagcaaaattaatttt
aagtatttaaatagagtaataaatactttcatagagtgttgtgaattcca
ggaatgtgacaaatgccaacttagtgtatttatcacttttctctcttttc
ccatttcttatgtgcatgtgtaccacagatctgtactcattattcactta
gtaatgatcaaagtgttggggagcagggctgggaggacatggactttcgg
atagcatttgatatgttaatgaagaagatatcttataataaataa
gaattcaattcttattcccagcacctcagttatgtgccttcaacttcaac
tttagaagatatgacatccttttctaaattctatggacacttttccttat
acctggacatgccaggtttggcatggccttggtggggacagactgacatg
gtttccgagctgaaacagggccagcacatgtggacctccacaagtgtaga
tggctatcatgagcataagacttgtttgtataataatgtgcatatttttc
attcttcctttaaaaaatgtcctccatggttgtgttaatgactccatgat
aatcagacaacaggggtccaggaggtgaaggtttccctaatgtcttagca
aaatggtaaaggatcggaccttcaggacaagcaataaggctgtggaaaag
gactctaaaataatgagttgcacaatatataatttctcaatatgcaaaat
ataaagattcaatgtgaattatgaggggcttcacaaatctaaaagaataa
aggtagccacactatgaggcagctttgtcagaaataaacaaaagcaggca
gattcctgagtcaaaggtcagcctgggacacagtaagtccaagcccaggt
gagatagaaatggtaatttcaggacaagtccttctcagcaagtttatcct
taacagaggcaggcagatctctgaattcctttgcaatgttaaaagaaaat
gtgtgcttgtggtctcctagaattaagggggatggggtcccaggatgctg
attcatactataatccaaaggaaaccctgagtaaatgactggattgatat
ataaaataaaagactgggcttattatctgcagcagaagagcaatccacag
aatagaatagcttggagaactatctctggcagaatatagagagaaaggaa
gctctatagagatcgctacagaaatcaaatcagaaagaaagaaaacagat
cagagagaaacagactagaaaactgtctctagcagatttcggccactagc
ttgactcacattgactcccaaatatcccttctctcagaagcccctctcca
gctgagtgttcctggcatacccccaacatgtacatatatcaaaataagat
caactgatttaatgccaacttagtgatgttgtacacacacttggggcttt
ac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85057397_85058144
seq2: B6Ng01-256L18.b_48_792

seq1  GAATTCATCAAGAAAATGCTTAGCAAATATCTCCCTTCTCTTACCCAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAGAAAATGCTTAGCAAATATCTCCCTTCTCTTACCCAGTA  50

seq1  AGTGGAAAACAAGGCTTAGAATGTTTGCATTGCATAGAGGTTCCCTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAAACAAGGCTTAGAATGTTTGCATTGCATAGAGGTTCCCTGATA  100

seq1  TTTCAGAGTCCTTTTACTCAAGTGAATACACAAGAGAAATGATGTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGTCCTTTTACTCAAGTGAATACACAAGAGAAATGATGTCCATT  150

seq1  TATTCAGAAACTTGGAATTGTATTTTTCGCCTTTGTGATTTGAAAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAAACTTGGAATTGTATTTTTCGCCTTTGTGATTTGAAAGAAAC  200

seq1  AGATCCCAAAGCTCAGCTAGGTAGGATACGTCAATGTAAGAAAAACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCAAAGCTCAGCTAGGTAGGATACGTCAATGTAAGAAAAACAGGA  250

seq1  CTTAAACACAATATTCAAAGTACCGTAGAGCAATCTAGATAGATAGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACACAATATTCAAAGTACCGTAGAGCAATCTAGATAGATAGATGA  300

seq1  TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA  350

seq1  GATAGATAGATAGATAGATCTCAGGTTGAGATACATGGGAAAGGTTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATAGATAGATCTCAGGTTGAGATACATGGGAAAGGTTGGAA  400

seq1  GAAAAGGTGAGGAATTATTTAATTATTTAATATTTTATAAATAAATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTGAGGAATTATTTAATTATTTAATATTTTATAAATAAATATTT  450

seq1  AAATGTTATAAACACTAATTTTTTAATCTTTAAAGAGCAAAATTAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATAAACACTAATTTTTTAATCTTTAAAGAGCAAAATTAATTTT  500

seq1  AAGTATTTAAATAGAGTAATAAATACTTTCATAGAGTGTTGTGAATTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTAAATAGAGTAATAAATACTTTCATAGAGTGTTGTGAATTCCA  550

seq1  GGAATGTGACAAATGCCAACTTAGTGTATTTATCACTTTTCTCTCTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGACAAATGCCAACTTAGTGTATTTATCACTTTTCTCTCTTTTC  600

seq1  CCATTTCTTATGTGCATGTGTACCACAGATCTGTACTCATTATTCACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTTATGTGCATGTGTACCACAGATCTGTACTCATTATTCACTTA  650

seq1  GTAATGATCAAAGTGTTGGGGAGCAGGGCGGGGGAGGACATGGACTTTCG  700
      |||||||||||||||||||||||||||||  |||||||||||||||||| 
seq2  GTAATGATCAAAGTGTTGGGGAGCAGGGC-TGGGAGGACATGGACTTTC-  698

seq1  GGATAGCATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAAATAA  748
      ||||||||||||| |||| ||||||||| |||||| || || ||||||
seq2  GGATAGCATTTGATATGTTAATGAAGAAGATATCTTAT-AATAAATAA  745