BAC Information

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BAC

Clone NameB6Ng01-257B16
Chromosome14 (Build37)
Map Location 112,795,497 - 112,796,594
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk5, LOC100043501
Downstream geneEG223186, LOC100043509, Tpm3-rs7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257B16.bB6Ng01-257B16.g
ACCGA062887GA062888
length1,1911,088
definitionB6Ng01-257B16.b B6Ng01-257B16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaactcttcagctggggaatggtggtaatgaagtgttcccgta
aaacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggcctt
gaactttctaacgaaattcaagacagtctatcagaagtaaagtgggaaat
agctttacaaggtatgtttggccttgaactttctctagtgttaggagcct
ttttgttccttttcacatgttatcaagtggttaaggcagggctgaaaatt
atggatgaaattcagggcaatctatcagaagtaaagcggggagagagagt
aggagcaaagaggaaatatggtacacaaaataagtatacaggcctttcca
cgggtcttgaacctgaggaaaagtttaggtcaggtaagaatacctgggga
gagattagaaggaaggagaaggaaaaagaaaagaaaaaagatcaatcagt
ggaggtttctaggagaaggagcctatactcatcactagatgagctcaagg
agccagtacttaatagttctgaatcagatgaaaaggctattagggcctgg
aaggcactctcccgagcaggtgaggccactggacaactaacaaagatcgt
ccagggacctcaggagtcattctcagattttttggccagaatgacagagg
cagcagagcgtatttttggagattcagagcaagccgcacctctggtagaa
tagctcatttatgagcaagccacgcaggaatgcagagcggccatagcccc
aagaaagaacaaaggtttacaagactggctcagggtttgtcgggagcttg
ggggacctctcactaatgcaggattagcggccgccatcctccaatcccaa
aaatgctccatgggcagaaatgaatcaacgcatagatcttgtccaggaac
aactagatgtattatggcaaatagctcagctgggatgtgacaaaagtttc
ccggattgtccgttacttcattcagtatgagaaattactaggcagctatt
tgtcaaaaagtcttttctcagtatatgttacagatgacgctgattgacag
gaccctcggatgagactgccatcaatcaggtcatcacggcttggcactgt
cctgaatccaggaattaaccgagatgtgaatcctccctcga

gaattcaattaaaacggaaattaatcgtgttctttcttataaagaaagaa
agtgttctggaaatagaaccaatattgaaatatggtgaaattcaagttaa
aaatcacattgctcttcacagcagatatgcaaggggaaacttggtacaat
tcaaatgttacattgcaaaatgtatctttctcaacatttataattagttc
actccataatgaataactttgtttttgagcagttcacacagtattcgtat
ttattaaagtgtgtggtagcagattatatgaaaaaatgcataatatttag
gacacagcaactctctgtcaagctctgtgcaatatgattaacatgtatca
ttttacttaatttctacaaaagaactgaaagagtacctatcctgatctca
ttttacaggtgaaaagatgtaatagaaattacaaacacacacacacacac
acatatgtataaatatatatgtatatatatttatatacatataacacata
ttagaaattacatatataagtaatagaaaatatatgtatatgtgtatatt
aaaataataaacttatatgtaacccatatacatctgataatgggttataa
ttacattcatcattcatgccttgtagcttaaaacaaaaaacaagcccttc
cgctcgactcgagactcgagccccgggctaccctgccagcagagtcttgc
ccaacacccgcaagggcccacacgggactccccacgggaccctaagacct
ctggtgagtggaccacagtgcctgccccaatccaatcacgcggaacttga
gactgcggtacatagggaagcaggctacccgggcctgatctggggcacaa
gtcccttctgctcgactcgagactcgagccccgggctaccttgccagcag
agtcttgcccaacacccgcaagggccacacgggactccccacgggaccct
aagacctctggtgagtggaccacagtgcctgccccaatccaatcgcgcgg
acttgagactgcgtacataggagcagctacccgggctgatctgggcacaa
gtcccttctgctcgactcgagactcgagcccggctacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112795497_112796594
seq2: B6Ng01-257B16.g_69_1156 (reverse)

seq1  GGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCAGAAGGGACTTGTGCCCCA  50
      |||||||  |||||||||||||||||||||||||||||||||||| ||||
seq2  GGTAGCC--GGGCTCGAGTCTCGAGTCGAGCAGAAGGGACTTGTG-CCCA  47

seq1  GATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTCAAGTTCCG  100
      ||||| |||||||||| |||||  |||||||| |||||||||||| ||||
seq2  GATCA-GCCCGGGTAG-CTGCT--CCTATGTA-CGCAGTCTCAAG-TCCG  91

seq1  CGCGATTGGATTGGGGCAGGCACTGTGGTCCACTCACCAGAGGTCTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGATTGGATTGGGGCAGGCACTGTGGTCCACTCACCAGAGGTCTTAGG  141

seq1  GTCCCGTGGGGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGCAAGACTCT  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTCCCGTGGGGAGTCCCGTGT-GGCCCTTGCGGGTGTTGGGCAAGACTCT  190

seq1  GCTGGCAAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCAGAAGGGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCAGAAGGGACTT  240

seq1  GTGCCCCAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCCAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTC  290

seq1  AAGTTCCGCGTGATTGGATTGGGGCAGGCACTGTGGTCCACTCACCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCGCGTGATTGGATTGGGGCAGGCACTGTGGTCCACTCACCAGAG  340

seq1  GTCTTAGGGTCCCGTGGGGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGGGTCCCGTGGGGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGC  390

seq1  AAGACTCTGCTGGCAGGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTGCTGGCAGGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGA  440

seq1  AGGGCTTGTTTTTTGTTTTAAGCTACAAGGCATGAATGATGAATGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTGTTTTTTGTTTTAAGCTACAAGGCATGAATGATGAATGTAATT  490

seq1  ATAACCCATTATCAGATGTATATGGGTTACATATAAGTTTATTATTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCATTATCAGATGTATATGGGTTACATATAAGTTTATTATTTTAA  540

seq1  TATACACATATACATATATTTTCTATTACTTATATATGTAATTTCTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACATATACATATATTTTCTATTACTTATATATGTAATTTCTAATA  590

seq1  TGTGTTATATGTATATAAATATATATACATATATATTTATACATATGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATATGTATATAAATATATATACATATATATTTATACATATGTGT  640

seq1  GTGTGTGTGTGTGTTTGTAATTTCTATTACATCTTTTCACCTGTAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTTTGTAATTTCTATTACATCTTTTCACCTGTAAAATG  690

seq1  AGATCAGGATAGGTACTCTTTCAGTTCTTTTGTAGAAATTAAGTAAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGATAGGTACTCTTTCAGTTCTTTTGTAGAAATTAAGTAAAATG  740

seq1  ATACATGTTAATCATATTGCACAGAGCTTGACAGAGAGTTGCTGTGTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTTAATCATATTGCACAGAGCTTGACAGAGAGTTGCTGTGTCCT  790

seq1  AAATATTATGCATTTTTTCATATAATCTGCTACCACACACTTTAATAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTATGCATTTTTTCATATAATCTGCTACCACACACTTTAATAAAT  840

seq1  ACGAATACTGTGTGAACTGCTCAAAAACAAAGTTATTCATTATGGAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATACTGTGTGAACTGCTCAAAAACAAAGTTATTCATTATGGAGTGA  890

seq1  ACTAATTATAAATGTTGAGAAAGATACATTTTGCAATGTAACATTTGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTATAAATGTTGAGAAAGATACATTTTGCAATGTAACATTTGAAT  940

seq1  TGTACCAAGTTTCCCCTTGCATATCTGCTGTGAAGAGCAATGTGATTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAAGTTTCCCCTTGCATATCTGCTGTGAAGAGCAATGTGATTTTT  990

seq1  AACTTGAATTTCACCATATTTCAATATTGGTTCTATTTCCAGAACACTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAATTTCACCATATTTCAATATTGGTTCTATTTCCAGAACACTTT  1040

seq1  CTTTCTTTATAAGAAAGAACACGATTAATTTCCGTTTTAATTGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTATAAGAAAGAACACGATTAATTTCCGTTTTAATTGAATTC  1088


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