BAC Information

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BAC

Clone NameB6Ng01-257G21
Chromosome14 (Build37)
Map Location 110,275,131 - 110,392,245
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk1, LOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257G21.bB6Ng01-257G21.g
ACCGA063131GA063132
length1,0861,068
definitionB6Ng01-257G21.b B6Ng01-257G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,391,166 - 110,392,245)(110,275,131 - 110,276,143)
sequence
gaattctattcacaaacactgttcatggcaaaagatcaataaatacatct
aaacagacagatgaataagggtcagacatttgccttttctgcttttctct
gagtttcttttatttttcaacaataaaatatgttgaaaagacctatcttt
tttttttcagtaagttagctataagatacatactcatgcatgaaattgaa
tcttgttttcctcagggattttctcctggcttctaactatgtccctgcca
agtttgttacaacaaaattggttacagtgggaagaggtgagtttgagaag
cttaaatattgaaaaaaactcataataattagatgctattattaaataat
tagcattctctaatttattggaaatttattataaattatatttcaatcca
tgagtgtatagctgtattttaaacttttcctcactttatggaagtcttat
aacaactatcacatattaaaacaaaatgtaaaactattcagtaacacatg
taactctaaatgatttatgaaataaagaacaactttttatggttgcatat
tttaaaaagttaatgaagtaagacttttcctaacatttaaaacaaaaata
atgaagcattactatgattcttaaaaagtcattagaaaatagtgtgcctt
ttataatcaaggaagaacaggtactctgccttaagacattcccttctgtt
cccctagacccaagccttaaggctgttgcctgtcaaggaagcagattagg
acttgtggcctttcttctcccttcttcaagtgccctataagtcccaagga
gcatcttctcctgtccttcctcttggcagtcatcactgcctcccaggttt
caacatcagcagacattccctgtggacacaccagctaaacaagccagcca
aacaggaaagtcacagttaggtcatcacatcatctaaaatgcagatatga
aacaaaacaacaaaatcctcaccaaaacaataacaaaaaatggatatcag
tatctagccctataatctatacagtaggacataaatattccacatagcca
agatataaaaaaaaaaaaaaaaaaaccgaaaaaaaa
gaattcaatgggatcttcggaggttccttttgtcataatgttgctttagg
aatctttatctcatttttaaatttatttttaattgttgtatacattgttc
ttctttatttttctataggtactttggacatatataattactcccaactt
tgtgctttatgggtaagttgagtgtatgaacaagtgggtcactggtactc
ctgccttctcttgggttattttttacttcttttttttttccattttttat
taggtatttagctcatttacatttccaatgctataccaaaagtcccccat
acccacccacccccactcccctacccacccactcccccttttgggccctg
gcgttcccctgtactggagcatataaagtttgcatgtccaatgggcctct
ctttccagtgatggccgactaggccatcttttgatacatatgcagctaga
gttaagggctccggggtactacttctaacggcttattttgttaaattctg
gtgtgatagattttgttttaccttttaaagttttatttcactatttgaaa
agaaagaatatacagaaacagaaaatttatataaaatagaaatattttca
gagaagccaaatatcttcattaaaaaaaaaagcaaaatttagttttttcc
ctttacaatttacatttaaattcaagaaaatttattcagagactatggtt
agttacatttaagattaaatcttttcctgtaaattatctccagtgtatta
aaatatctctttgagagttgaaagtctattttgtgcctggcccagagagt
cttcgtggtgggggcagaataggactctggttgaatggctttaaagtctg
agggcctctggatgtcttagctctctaactatactgaaatggtgcatgat
agcttctaaagggccctgaatactttcttgctctttctgaagggtagaaa
actgctggctaaggtgattaacacctgttagcctacccagctgaaggtta
agtaatggggtcttgattctatctcgagcagagaactttgtggtactaat
ctttcagccttgcttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110391166_110392245
seq2: B6Ng01-257G21.b_42_1127 (reverse)

seq1  TTTTTTTT---TTTTTTTTTTTTTTTTTTT-----TTGGCTATGTTGGAA  42
      ||||||||   |||||||||||||||||||     ||||||||| |||||
seq2  TTTTTTTTCGGTTTTTTTTTTTTTTTTTTTATATCTTGGCTATG-TGGAA  49

seq1  TATTTATGTCCTACTGTTATAGAATATAGGGCTAGATACTGATATCCA-T  91
      |||||||||||||||| |||||| |||||||||||||||||||||||| |
seq2  TATTTATGTCCTACTG-TATAGATTATAGGGCTAGATACTGATATCCATT  98

seq1  GTTTGTTATTG-TTTGGTGAGGATTTTGTTTGTTTTGTTTCATATCTGCA  140
       |||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  TTTTGTTATTGTTTTGGTGAGGATTTTG-TTGTTTTGTTTCATATCTGCA  147

seq1  TTTTTAGATGATGTGATGACCTAACTGTGACTTTCCTGTTTGGCTGGCTT  190
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTAGATGATGTGATGACCTAACTGTGACTTTCCTGTTTGGCTGGCTT  196

seq1  GTTTAGCTGGTGTGTCCACAGGGAATGTCTGCTGATGTTGAAACCTGGGA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCTGGTGTGTCCACAGGGAATGTCTGCTGATGTTGAAACCTGGGA  246

seq1  GGCAGTGATGACTGCCAAGAGGAAGGACAGGAGAAGATGCTCCTTGGGAC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGATGACTGCCAAGAGGAAGGACAGGAGAAGATGCTCCTTGGGAC  296

seq1  TTATAGGGCACTTGAAGAAGGGAGAAGAAAGGCCACAAGTCCTAATCTGC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGGCACTTGAAGAAGGGAGAAGAAAGGCCACAAGTCCTAATCTGC  346

seq1  TTCCTTGACAGGCAACAGCCTTAAGGCTTGGGTCTAGGGGAACAGAAGGG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGACAGGCAACAGCCTTAAGGCTTGGGTCTAGGGGAACAGAAGGG  396

seq1  AATGTCTTAAGGCAGAGTACCTGTTCTTCCTTGATTATAAAAGGCACACT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTAAGGCAGAGTACCTGTTCTTCCTTGATTATAAAAGGCACACT  446

seq1  ATTTTCTAATGACTTTTTAAGAATCATAGTAATGCTTCATTATTTTTGTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAATGACTTTTTAAGAATCATAGTAATGCTTCATTATTTTTGTT  496

seq1  TTAAATGTTAGGAAAAGTCTTACTTCATTAACTTTTTAAAATATGCAACC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGTTAGGAAAAGTCTTACTTCATTAACTTTTTAAAATATGCAACC  546

seq1  ATAAAAAGTTGTTCTTTATTTCATAAATCATTTAGAGTTACATGTGTTAC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGTTGTTCTTTATTTCATAAATCATTTAGAGTTACATGTGTTAC  596

seq1  TGAATAGTTTTACATTTTGTTTTAATATGTGATAGTTGTTATAAGACTTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTTTTACATTTTGTTTTAATATGTGATAGTTGTTATAAGACTTC  646

seq1  CATAAAGTGAGGAAAAGTTTAAAATACAGCTATACACTCATGGATTGAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTGAGGAAAAGTTTAAAATACAGCTATACACTCATGGATTGAAA  696

seq1  TATAATTTATAATAAATTTCCAATAAATTAGAGAATGCTAATTATTTAAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTTATAATAAATTTCCAATAAATTAGAGAATGCTAATTATTTAAT  746

seq1  AATAGCATCTAATTATTATGAGTTTTTTTCAATATTTAAGCTTCTCAAAC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATCTAATTATTATGAGTTTTTTTCAATATTTAAGCTTCTCAAAC  796

seq1  TCACCTCTTCCCACTGTAACCAATTTTGTTGTAACAAACTTGGCAGGGAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTTCCCACTGTAACCAATTTTGTTGTAACAAACTTGGCAGGGAC  846

seq1  ATAGTTAGAAGCCAGGAGAAAATCCCTGAGGAAAACAAGATTCAATTTCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAGAAGCCAGGAGAAAATCCCTGAGGAAAACAAGATTCAATTTCA  896

seq1  TGCATGAGTATGTATCTTATAGCTAACTTACTGAAAAAAAAAAGATAGGT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAGTATGTATCTTATAGCTAACTTACTGAAAAAAAAAAGATAGGT  946

seq1  CTTTTCAACATATTTTATTGTTGAAAAATAAAAGAAACTCAGAGAAAAGC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAACATATTTTATTGTTGAAAAATAAAAGAAACTCAGAGAAAAGC  996

seq1  AGAAAAGGCAAATGTCTGACCCTTATTCATCTGTCTGTTTAGATGTATTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGCAAATGTCTGACCCTTATTCATCTGTCTGTTTAGATGTATTT  1046

seq1  ATTGATCTTTTGCCATGAACAGTGTTTGTGAATAGAATTC  1080
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTTTTGCCATGAACAGTGTTTGTGAATAGAATTC  1086

seq1: chr14_110275131_110276143
seq2: B6Ng01-257G21.g_110_1132

seq1  TTAGGAATCTTTATCTCATTTTTAAATTTATTTTTAATTGTTGTATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATCTTTATCTCATTTTTAAATTTATTTTTAATTGTTGTATACAT  50

seq1  TGTTCTTCTTTATTTTTCTATAGGTACTTTGGACATATATAATTACTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCTTTATTTTTCTATAGGTACTTTGGACATATATAATTACTCCC  100

seq1  AACTTTGTGCTTTATGGGTAAGTTGAGTGTATGAACAAGTGGGTCACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTGCTTTATGGGTAAGTTGAGTGTATGAACAAGTGGGTCACTGG  150

seq1  TACTCCTGCCTTCTCTTGGGTTATTTTTTACTTCTTTTTTTTTTCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTGCCTTCTCTTGGGTTATTTTTTACTTCTTTTTTTTTTCCATTT  200

seq1  TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCC  250

seq1  CCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTTGGG  300

seq1  CCCTGGCGTTCCCCTGTACTGGAGCATATAAAGTTTGCATGTCCAATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCGTTCCCCTGTACTGGAGCATATAAAGTTTGCATGTCCAATGGG  350

seq1  CCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAG  400

seq1  CTAGAGTTAAGGGCTCCGGGGTACTACTTCTAACGGCTTATTTTGTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTAAGGGCTCCGGGGTACTACTTCTAACGGCTTATTTTGTTAAA  450

seq1  TTCTGGTGTGATAGATTTTGTTTTACCTTTTAAAGTTTTATTTCACTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTGATAGATTTTGTTTTACCTTTTAAAGTTTTATTTCACTATT  500

seq1  TGAAAAGAAAGAATATACAGAAACAGAAAATTTATATAAAATAGAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAAAGAATATACAGAAACAGAAAATTTATATAAAATAGAAATAT  550

seq1  TTTCAGAGAAGCCAAATATCTTCATTAAAAAAAAAAGCAAAATTTAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGAAGCCAAATATCTTCATTAAAAAAAAAAGCAAAATTTAGTTT  600

seq1  TTTCCCTTTACAATTTACATTTAAATTCAAGAAAATTTATTCAGAGACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTACAATTTACATTTAAATTCAAGAAAATTTATTCAGAGACTA  650

seq1  TGGTTAGTTACATTTAAGATTAAATC-TTTCCTGTAAATTATCTCCAGTG  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGTTAGTTACATTTAAGATTAAATCTTTTCCTGTAAATTATCTCCAGTG  700

seq1  TATTAAAATATCTCTTTGAGAGTTGAAAGTCTA-TTTGTGCCTGGCCCAG  748
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATTAAAATATCTCTTTGAGAGTTGAAAGTCTATTTTGTGCCTGGCCCAG  750

seq1  AGAGTC-TCGTGGTGGGGGCAGAATAGGACTCTGG-TGAATGGCTTTAAA  796
      |||||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGTCTTCGTGGTGGGGGCAGAATAGGACTCTGGTTGAATGGCTTTAAA  800

seq1  GTCTGAGGGCCTCTGGATGTTCTAGCTCTCTAACTATACTGAAATGGTGC  846
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GTCTGAGGGCCTCTGGATGTCTTAGCTCTCTAACTATACTGAAATGGTGC  850

seq1  ATGATAGCTTCTAAAAGGCCCTGAATACTTTCTTGCTCTTTCTG-AGGGT  895
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  ATGATAGCTTCTAAAGGGCCCTGAATACTTTCTTGCTCTTTCTGAAGGGT  900

seq1  AGAAAACTGCTGGCTTAGGTGATTAACACCTG-TAGCCTAACCAGCTGAG  944
      ||||||||||||||| |||||||||||||||| ||||||| |||||||| 
seq2  AGAAAACTGCTGGCTAAGGTGATTAACACCTGTTAGCCTACCCAGCTGAA  950

seq1  GTTTAAGTAATGTGGCCTTTGTTCTATCTC-AGCAG-GAACTTTGTGGTT  992
      | |||||||||| || |||  ||||||||| ||||| |||||||||||| 
seq2  GGTTAAGTAATGGGGTCTTGATTCTATCTCGAGCAGAGAACTTTGTGGTA  1000

seq1  CTAA-CTTTCAGCC-TGCTTGTC  1013
      |||| ||||||||| ||||||||
seq2  CTAATCTTTCAGCCTTGCTTGTC  1023