BAC Information

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BAC

Clone NameB6Ng01-259J05
Chromosome14 (Build37)
Map Location 101,688,253 - 101,689,379
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043413, EG668683, EG668684, 1700110M21Rik, LOC100043421
Downstream geneLOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259J05.bB6Ng01-259J05.g
ACCGA064721GA064722
length1,1181,231
definitionB6Ng01-259J05.b B6Ng01-259J05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcatttagcaccatattttaaaaagaaaagactttttaaaaaa
ctttctaaaaattacagaaacatttgtggaaacatttctctgggagttct
gtggcattagatcagatatctagctccagtaaacatctagctccaaaaaa
tattcatattataatccataaaagtagtaaaatgtcagttattaagtagc
agctgaaataattttatgtttgaaggtcactacaacatgagaaactgtat
ttaaagggtcacaacattaggaaggttgagaaccactcttctatggagtt
tgttgtgggttttttatttaatactcttcaaagtgaactcattcttgata
aatcagatattaaaaactaagtttgacatatgtgtatatacacatatcca
cataaaaatagttaatgaaaaatggctgtgaattaggaatagagcaaggg
ggcatatgagatagtttgaagagagaaaaggaaagagaggagtgctatag
ttgtattatcatttcaaaataaaagaaacagacataattaaaaacctaag
tttgtttcctaaaacaatacagaggtgaatctgcattgttgggggaagcc
cctatagaatacaagaaatcagggtagtttagatctgagattcttttaga
aaaggaagggataagttctcctttccttcaatgctgatacacgggtacaa
cagagaaacagagacatggcctctggtgttgagctccaagctgtactgac
tacctttctttagcgaatgtattcatttccctccacagatgtgagcactg
gcttcaacccagatgtagaagacgatgctgcctcttcctggctcctctct
ctggtttagaactaaccaacgccctggcttcatatgtttctttattgagc
cccttggtcaaaaagagaaaaaataaatgcctcagctgctactagtacca
atttgcaaagcatgtaatttgactacagagaccttatggttttttctttt
aaatagcagctaaaatctgacatgttctgcacaaattacaagcctaacaa
gatgctgcgtgtctttcgttgctgacttatttctaatgcaattttgagtt
catacaatgccctcacta

gaattctcacctgaggaataccgaaaggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgttgaagatgtgaagaaagaggtacactcctccatttttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtagtaccagaagttcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccacat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaatgtactcactgataagtggatattaacccagaaact
tagtatagagagatataaggtacaatatgcaaaacatatgaaactgaaga
agaacgaagaccaaagtgtggacactttgctccttattagaattggaaac
aatcacccatggaaggagttacagagacaaaatttggagctgagacaaaa
ggatggtccatctagagactgccatatccagggatccatcccataattag
cctccaaacgatgacatcattgcatacactagcaagtctttgttgcaagg
atggtgatatagctgtcccttgtgagactatgccggggcctagcaaacac
ataagtggatgctcacagtcagctattggattagggtcacagggccccca
aatggaaggagctagagaaagtatccaaggagctaaaaggatctgcaatc
cttattggtggaacaacaattatgaactaaacagtaccccgaagctctct
gaactctagctgcataatgtatcaaaagatggccctagtcggccattcat
ggtaaagagagggccaattgggttcaaggcaaatcttttattatcctcag
tacaggcacgtcagggaccgaaaatgggaatggcgcgtgtagggtaagat
tcggtatatactacttatgcgctggtcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101688253_101689379
seq2: B6Ng01-259J05.b_46_1163

seq1  GAATTCATCATTTAGCACCATATTTTAAAAAGAAAAGACTTTTTAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATTTAGCACCATATTTTAAAAAGAAAAGACTTTTTAAAAAA  50

seq1  CTTTCTAAAAATTACAGAAACATTTGTGGAAACATTTCTCTGGGAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAAAAATTACAGAAACATTTGTGGAAACATTTCTCTGGGAGTTCT  100

seq1  GTGGCATTAGATCAGATATCTAGCTCCAGTAAACATCTAGCTCCAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATTAGATCAGATATCTAGCTCCAGTAAACATCTAGCTCCAAAAAA  150

seq1  TATTCATATTATAATCCATAAAAGTAGTAAAATGTCAGTTATTAAGTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTATAATCCATAAAAGTAGTAAAATGTCAGTTATTAAGTAGC  200

seq1  AGCTGAAATAATTTTATGTTTGAAGGTCACTACAACATGAGAAACTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAATAATTTTATGTTTGAAGGTCACTACAACATGAGAAACTGTAT  250

seq1  TTAAAGGGTCACAACATTAGGAAGGTTGAGAACCACTCTTCTATGGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGTCACAACATTAGGAAGGTTGAGAACCACTCTTCTATGGAGTT  300

seq1  TGTTGTGGGTTTTTTATTTAATACTCTTCAAAGTGAACTCATTCTTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGGTTTTTTATTTAATACTCTTCAAAGTGAACTCATTCTTGATA  350

seq1  AATCAGATATTAAAAACTAAGTTTGACATATGTGTATATACACATATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGATATTAAAAACTAAGTTTGACATATGTGTATATACACATATCCA  400

seq1  CATAAAAATAGTTAATGAAAAATGGCTGTGAATTAGGAATAGAGCAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAATAGTTAATGAAAAATGGCTGTGAATTAGGAATAGAGCAAGGG  450

seq1  GGCATATGAGATAGTTTGAAGAGAGAAAAGGAAAGAGAGGAGTGCTATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGAGATAGTTTGAAGAGAGAAAAGGAAAGAGAGGAGTGCTATAG  500

seq1  TTGTATTATCATTTCAAAATAAAAGAAACAGACATAATTAAAAACCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTATCATTTCAAAATAAAAGAAACAGACATAATTAAAAACCTAAG  550

seq1  TTTGTTTCCTAAAACAATACAGAGGTGAATCTGCATTGTTGGGGGAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCCTAAAACAATACAGAGGTGAATCTGCATTGTTGGGGGAAGCC  600

seq1  CCTATAGAATACAAGAAATCAGGGTAGTTTAGATCTGAGATTCTTTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGAATACAAGAAATCAGGGTAGTTTAGATCTGAGATTCTTTTAGA  650

seq1  AAAGGAAGGGATAAGTTCTCCTTTCCTTCAATGCTGATACACGGGTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGGATAAGTTCTCCTTTCCTTCAATGCTGATACACGGGTACAA  700

seq1  CAGAGAAACAGAGACATGGCCTCTGGTGTTGAGCTCCAAGCTGTACTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACAGAGACATGGCCTCTGGTGTTGAGCTCCAAGCTGTACTGAC  750

seq1  TACCTTTCTTTAGCGAATGTATTCATTTCCCTCCACAGATGTGAGCACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCTTTAGCGAATGTATTCATTTCCCTCCACAGATGTGAGCACTG  800

seq1  GCTTCAACCCAGATGTAGAAGACGATGCTGCCTCTTCCTGGCTCCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACCCAGATGTAGAAGACGATGCTGCCTCTTCCTGGCTCCTCTCT  850

seq1  CTGGTTTAGAACTAACCAACGCCCTGGCTTCATATGTTTCTTTATTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTAGAACTAACCAACGCCCTGGCTTCATATGTTTCTTTATTGAGC  900

seq1  CCCTTGGTCAAAAAGAGAAAAAATAAATGCCTCAGCTGCTACTAGTACCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTCAAAAAGAGAAAAAATAAATGCCTCAGCTGCTACTAGTACCA  950

seq1  ATTTGCAAAGCATGTAATTTGACTACAGAGACCTTATGGGTTTTTCTTTT  1000
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  ATTTGCAAAGCATGTAATTTGACTACAGAGACCTTATGGTTTTTTC-TTT  999

seq1  TAAATAGCAGCTAAAAATCTGACATGTTCTGCACAAATTACAAGGCCTTA  1050
      |||||||||||| |||||||||||||||||||||||||||||||  | ||
seq2  TAAATAGCAGCT-AAAATCTGACATGTTCTGCACAAATTACAAG--CCTA  1046

seq1  ACAAGATGCTGCGTGTCTTTTCCTTTGCTGACTTTATTTCTAATGCAATT  1100
      ||||||||||||||||||||  | |||||||| |||||||||||||||  
seq2  ACAAGATGCTGCGTGTCTTT--CGTTGCTGAC-TTATTTCTAATGCAA--  1091

seq1  TTTTGAGGTCATACAATGCCTTCACTA  1127
      ||||||| |||||||||||| ||||||
seq2  TTTTGAGTTCATACAATGCCCTCACTA  1118


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