BAC Information

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BAC

Clone NameB6Ng01-259L22
Chromosome14 (Build37)
Map Location 69,075,260 - 69,206,735
singlet/doubletdoublet
Overlap geneAdam7, Adamdec1
Upstream geneLOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
Downstream geneAdam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259L22.bB6Ng01-259L22.g
ACCGA064849GA064850
length1,1361,072
definitionB6Ng01-259L22.b B6Ng01-259L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,075,260 - 69,076,413)(69,205,663 - 69,206,735)
sequence
gaattcacaaagttctaactcagagttcttacttccaaatagccaagtct
catttccctgttgaacttttggcttccatgatgaggggagggttctaaac
tcaactatggttcacacagttaatatgcaagcactattcctaccatctgc
atgtcttcaagagagagctgtactgtcttttaacacaagaacatgtgttt
tataaaacagattttttttacttgcttatgtatattaccatgagtaatta
tccaccacatcccacaacctctttggacattactttgtattattgcaatt
aagacatctaccccatttctttctgccctttccaatatttcagcatctac
ttttttgtgtgtgcacacagcccacattgaattcttgcctaagctctgtg
attcagagctggatagattagcattgtttccactgattttgatctggcca
tgtttcagcttcacctcagactgtatttttcccccagcatgactcataca
taaatctgaattatccttaaatgctaccctacactattcatagaaaaatg
tattcaaatgggaaatgaaaatgttaatagttcccaatgcatatttttaa
gtttccagaaatctttaatttgccactaagcaataactaagaaataatag
ttattgtaaaagttaggagacaagtagagtaggccatatagtgacaatct
ccagaagtatagttaaaacattcactgggctttttaaaaagcagagttag
agagttggacaaacttactgggatccaactcctctacaggaacactttac
ttttaatacatagatgatttgttatgggcttaataatgttaatggaaatg
atcaaaacctttccaaatatttcttgcttttactttaaaaatcaataccc
tgtttccatcaattacatgagaaactaagccaatatatagactctccaga
atctgccaaatgcctatttcaaatgatctcatgcaggtaaattgctctat
atgctttgtgactcccccagcgatatctactgcattcagacttatgtgct
gagctagtctagcaggacagggttacacatgactagcttttttgtttttt
tggctaggactgaaattacatcaatatacgttattt
gaattccacctaataacaaatatctatacaatgtttacaatgaaaaataa
ccaaatattcaataaaaaatcaaactgtaatattgactaatatttagata
ccccaaaggcagcaagccacacacacacacagtatgtttcttttccatat
taataatttaacacgctttaaatggtcagattaaattgataacatgcaaa
ttttacaaagagttgaaaaatgactagtataaactccaagataaaaatct
tatgatgcaaacatgttttatgagaaagctgttttgataaatattagtac
aagtgtttttagtacagacagcataatacaagtacttcttacaactcaat
ttatcttgaagacataataatcccaaaattatatgcttagtaattaagct
caaaatataatatagccaagctaagggaaaatcgttaacctccagtaatt
gtagtcaacttaatgactgtctctaagaaattaagaaacaagaagaatat
gaacatcacatttatagaacatttgaataaggccatcacctaggtaacta
atgtaagttacttgtaacaacagtactgctttggacctagaaaaacatga
tttaaaaaagaaaaacattgatcctatatcaggacataatatgagaatag
acctgcctcatatatcttcataaatagaattattatgaaacattttctta
ggatactccagaagtacaataaaaatgtatttaagtaagagatactgaaa
aatcctaaattttcagacagcataagtctcacaagtcatggcacagtagt
acaactacgtctcatgagtcagagaaatataaagtattttaagtgattga
taatgagaacactctgctaatcagtcctaggaagtaaatagcccccaatg
cctatgtttcatgagttgagacccaattacttcaaacagtacagatagaa
agtttttaaaaattaaaataaatacatgaactatattttaaaagtaaaaa
ggataaagctgcctataataaaatattaaaggaggtaacaaagtcaaacg
tagattggtcaaaaaaggaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69075260_69076413
seq2: B6Ng01-259L22.b_47_1182

seq1  GAATTCACAAAGTTCTAACTCAGAGTTCTTACTTCCAAATAGCCAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAAGTTCTAACTCAGAGTTCTTACTTCCAAATAGCCAAGTCT  50

seq1  CATTTCCCTGTTGAACTTTTGGCTTCCATGATGAGGGGAGGGTTCTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCTGTTGAACTTTTGGCTTCCATGATGAGGGGAGGGTTCTAAAC  100

seq1  TCAACTATGGTTCACACAGTTAATATGCAAGCACTATTCCTACCATCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTATGGTTCACACAGTTAATATGCAAGCACTATTCCTACCATCTGC  150

seq1  ATGTCTTCAAGAGAGAGCTGTACTGTCTTTTAACACAAGAACATGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCAAGAGAGAGCTGTACTGTCTTTTAACACAAGAACATGTGTTT  200

seq1  TATAAAACAGATTTTTTTTACTTGCTTATGTATATTACCATGAGTAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACAGATTTTTTTTACTTGCTTATGTATATTACCATGAGTAATTA  250

seq1  TCCACCACATCCCACAACCTCTTTGGACATTACTTTGTATTATTGCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCACATCCCACAACCTCTTTGGACATTACTTTGTATTATTGCAATT  300

seq1  AAGACATCTACCCCATTTCTTTCTGCCCTTTCCAATATTTCAGCATCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCTACCCCATTTCTTTCTGCCCTTTCCAATATTTCAGCATCTAC  350

seq1  TTTTTTGTGTGTGCACACAGCCCACATTGAATTCTTGCCTAAGCTCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTGTGTGCACACAGCCCACATTGAATTCTTGCCTAAGCTCTGTG  400

seq1  ATTCAGAGCTGGATAGATTAGCATTGTTTCCACTGATTTTGATCTGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGCTGGATAGATTAGCATTGTTTCCACTGATTTTGATCTGGCCA  450

seq1  TGTTTCAGCTTCACCTCAGACTGTATTTTTCCCCCAGCATGACTCATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGCTTCACCTCAGACTGTATTTTTCCCCCAGCATGACTCATACA  500

seq1  TAAATCTGAATTATCCTTAAATGCTACCCTACACTATTCATAGAAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTGAATTATCCTTAAATGCTACCCTACACTATTCATAGAAAAATG  550

seq1  TATTCAAATGGGAAATGAAAATGTTAATAGTTCCCAATGCATATTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATGGGAAATGAAAATGTTAATAGTTCCCAATGCATATTTTTAA  600

seq1  GTTTCCAGAAATCTTTAATTTGCCACTAAGCAATAACTAAGAAATAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGAAATCTTTAATTTGCCACTAAGCAATAACTAAGAAATAATAG  650

seq1  TTATTGTAAAAGTTAGGAGACAAGTAGAGTAGGCCATATAGTGACAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTAAAAGTTAGGAGACAAGTAGAGTAGGCCATATAGTGACAATCT  700

seq1  CCAGAAGTATAGTTAAAACATTCACTGGGCTTTTTAAAAAGCAGAGTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTATAGTTAAAACATTCACTGGGCTTTTTAAAAAGCAGAGTTAG  750

seq1  AGAGTTGGACAAACTTACTGGGATCCAACTCCTCTACAGGAACACTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGACAAACTTACTGGGATCCAACTCCTCTACAGGAACACTTTAC  800

seq1  TTTTAATACATAGATGATTTGTTATGGGCTTAATAATGTTAATGGAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATACATAGATGATTTGTTATGGGCTTAATAATGTTAATGGAAATG  850

seq1  ATCAAAACCTTTCCAAATATTTCTTGCTTTTACTTTAAAAATCAATACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACCTTTCCAAATATTTCTTGCTTTTACTTTAAAAATCAATACCC  900

seq1  TGTTTCCATCAAATTACAATGAGAAACTAAGCCAATATATAGACTCTCCA  950
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  TGTTTCCATC-AATTAC-ATGAGAAACTAAGCCAATATATAGACTCTCCA  948

seq1  GAATCTGCCAAAATGCCTATTTCAAATGATCTCATGCAGGTTAAATTGCT  1000
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  GAATCTGCC-AAATGCCTATTTCAAATGATCTCATGCAGG-TAAATTGCT  996

seq1  CTAATATGCTTTGTGACT-CCCCAGCGATTAATCTACTGGCATTCAGACT  1049
      || ||||||||||||||| ||||||||||  ||||||| |||||||||||
seq2  CT-ATATGCTTTGTGACTCCCCCAGCGAT--ATCTACT-GCATTCAGACT  1042

seq1  TATGTGCTGAGCTAAGTCTAGCAAGAACAGGG-TACACCAATGACCTAGC  1098
      ||||||||||||| |||||||| || |||||| |||||  |||| |||||
seq2  TATGTGCTGAGCT-AGTCTAGC-AGGACAGGGTTACAC--ATGA-CTAGC  1087

seq1  TTTTTTTTTTTTTTTTTTTTGGCTAGACTTGATATTACATCATATACATT  1148
            |||||| |||||||||||||   ||| ||||||||| ||| |  
seq2  ------TTTTTTGTTTTTTTGGCTAGGACTGAAATTACATCA-ATATACG  1130

seq1  TTATTT  1154
      ||||||
seq2  TTATTT  1136

seq1: chr14_69205663_69206735
seq2: B6Ng01-259L22.g_65_1136 (reverse)

seq1  ATTTTCTTTTTTGAACAATCTACGTTTGACTTTGTTACCTCCTTTAATAT  50
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTTTTTGACCAATCTACGTTTGACTTTGTTACCTCCTTTAATAT  50

seq1  TTTATTATAGGCAGCTTTATCCTTTTTACTTTTAAAATTATAGTTCATGT  100
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTATTATAGGCAGCTTTATCCTTTTTACTTTTAAAA-TATAGTTCATGT  99

seq1  ATTTATTTTAATTTTTAAAAACTTTCTATCTGTACTGTTTGAAGTAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTAATTTTTAAAAACTTTCTATCTGTACTGTTTGAAGTAATTG  149

seq1  GGTCTCAACTCATGAAACATAGGCATTGGGGGCTATTTACTTCCTAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAACTCATGAAACATAGGCATTGGGGGCTATTTACTTCCTAGGAC  199

seq1  TGATTAGCAGAGTGTTCTCATTATCAATCACTTAAAATACTTTATATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGCAGAGTGTTCTCATTATCAATCACTTAAAATACTTTATATTTC  249

seq1  TCTGACTCATGAGACGTAGTTGTACTACTGTGCCATGACTTGTGAGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTCATGAGACGTAGTTGTACTACTGTGCCATGACTTGTGAGACTT  299

seq1  ATGCTGTCTGAAAATTTAGGATTTTTCAGTATCTCTTACTTAAATACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCTGAAAATTTAGGATTTTTCAGTATCTCTTACTTAAATACATT  349

seq1  TTTATTGTACTTCTGGAGTATCCTAAGAAAATGTTTCATAATAATTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTACTTCTGGAGTATCCTAAGAAAATGTTTCATAATAATTCTAT  399

seq1  TTATGAAGATATATGAGGCAGGTCTATTCTCATATTATGTCCTGATATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGATATATGAGGCAGGTCTATTCTCATATTATGTCCTGATATAG  449

seq1  GATCAATGTTTTTCTTTTTTAAATCATGTTTTTCTAGGTCCAAAGCAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATGTTTTTCTTTTTTAAATCATGTTTTTCTAGGTCCAAAGCAGTA  499

seq1  CTGTTGTTACAAGTAACTTACATTAGTTACCTAGGTGATGGCCTTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTACAAGTAACTTACATTAGTTACCTAGGTGATGGCCTTATTCA  549

seq1  AATGTTCTATAAATGTGATGTTCATATTCTTCTTGTTTCTTAATTTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTATAAATGTGATGTTCATATTCTTCTTGTTTCTTAATTTCTTA  599

seq1  GAGACAGTCATTAAGTTGACTACAATTACTGGAGGTTAACGATTTTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTCATTAAGTTGACTACAATTACTGGAGGTTAACGATTTTCCCT  649

seq1  TAGCTTGGCTATATTATATTTTGAGCTTAATTACTAAGCATATAATTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGGCTATATTATATTTTGAGCTTAATTACTAAGCATATAATTTTG  699

seq1  GGATTATTATGTCTTCAAGATAAATTGAGTTGTAAGAAGTACTTGTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTATGTCTTCAAGATAAATTGAGTTGTAAGAAGTACTTGTATTA  749

seq1  TGCTGTCTGTACTAAAAACACTTGTACTAATATTTATCAAAACAGCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTGTACTAAAAACACTTGTACTAATATTTATCAAAACAGCTTTC  799

seq1  TCATAAAACATGTTTGCATCATAAGATTTTTATCTTGGAGTTTATACTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACATGTTTGCATCATAAGATTTTTATCTTGGAGTTTATACTAG  849

seq1  TCATTTTTCAACTCTTTGTAAAATTTGCATGTTATCAATTTAATCTGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCAACTCTTTGTAAAATTTGCATGTTATCAATTTAATCTGACC  899

seq1  ATTTAAAGCGTGTTAAATTATTAATATGGAAAAGAAACATACTGTGTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGCGTGTTAAATTATTAATATGGAAAAGAAACATACTGTGTGTG  949

seq1  TGTGTGGCTTGCTGCCTTTGGGGTATCTAAATATTAGTCAATATTACAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGCTTGCTGCCTTTGGGGTATCTAAATATTAGTCAATATTACAGT  999

seq1  TTGATTTTTTATTGAATATTTGGTTATTTTTCATTGTAAACATTGTATAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTTATTGAATATTTGGTTATTTTTCATTGTAAACATTGTATAG  1049

seq1  ATATTTGTTATTAGGTGGAATTC  1073
      |||||||||||||||||||||||
seq2  ATATTTGTTATTAGGTGGAATTC  1072